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2DUK	Crystal structure of MS0616 Descriptor: MS0616 Authors: Hosaka, T, Nishino, A, Uchikubo, K.-T, Kishishita, S, Murayama, K, Shirouzu, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-07-24 Release date: 2007-01-24 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.62 Å) Cite: Crystal structure of MS0616 To be Published
2DSC	Crystal structure of human ADP-ribose pyrophosphatase NUDT5 in complex with magnesium and ADP-ribose Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, ADP-sugar pyrophosphatase, MAGNESIUM ION Authors: Zha, M, Zhong, C, Ding, J. Deposit date: 2006-06-28 Release date: 2006-11-14 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal Structures of Human NUDT5 Reveal Insights into the Structural Basis of the Substrate Specificity J.Mol.Biol., 364, 2006
2ICK	Human isopentenyl diphophate isomerase complexed with substrate analog Descriptor: DIMETHYLALLYL DIPHOSPHATE, Isopentenyl-diphosphate delta isomerase, MANGANESE (II) ION Authors: Zheng, W, Bartlam, M, Rao, Z. Deposit date: 2006-09-12 Release date: 2007-03-20 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.93 Å) Cite: The crystal structure of human isopentenyl diphosphate isomerase at 1.7 A resolution reveals its catalytic mechanism in isoprenoid biosynthesis J.Mol.Biol., 366, 2007
2KDV	Solution structure of RNA Pyrophosphohydrolase RppH from Escherichia coli Descriptor: RNA pyrophosphohydrolase Authors: Bi, Y, Li, H, Jin, C. Deposit date: 2009-01-19 Release date: 2010-01-26 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of RNA pyrophosphohydrolase RppH from Escherichia coli To be Published
2ICJ	The crystal structure of human isopentenyl diphophate isomerase Descriptor: Isopentenyl-diphosphate delta isomerase, MAGNESIUM ION, SULFATE ION Authors: Zheng, W, Bartlam, M, Rao, Z. Deposit date: 2006-09-12 Release date: 2007-03-20 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.7 Å) Cite: The crystal structure of human isopentenyl diphosphate isomerase at 1.7 A resolution reveals its catalytic mechanism in isoprenoid biosynthesis J.Mol.Biol., 366, 2007
2KDW	Solution structure of RppH mutant E53A from Escherichia coli Descriptor: RNA pyrophosphohydrolase Authors: Li, H, Bi, Y, Jin, C. Deposit date: 2009-01-19 Release date: 2010-01-26 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of RppH mutant E53A from Escherichia coli To be Published
2I8T	GDP-mannose mannosyl hydrolase-calcium-GDP-mannose complex Descriptor: CALCIUM ION, GDP-mannose mannosyl hydrolase, GLYCEROL, ... Authors: Zou, Y, Li, C, Brunzelle, J.S, Nair, S.K. Deposit date: 2006-09-03 Release date: 2007-06-19 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Molecular basis for substrate selectivity and specificity by an LPS biosynthetic enzyme Biochemistry, 46, 2007
2AZW	Crystal structure of the MutT/nudix family protein from Enterococcus faecalis Descriptor: MutT/nudix family protein, PENTAETHYLENE GLYCOL Authors: Zhang, R, Zhou, M, Moy, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) Deposit date: 2005-09-12 Release date: 2006-01-10 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.9 Å) Cite: The 1.9A crystal structure of the MutT/nudix family protein from Enterococcus faecalis To be Published
2GT4	Crystal Structure of the Y103F mutant of the GDP-mannose mannosyl hydrolase in complex with GDP-mannose and MG+2 Descriptor: GDP-mannose mannosyl hydrolase, GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, MAGNESIUM ION, ... Authors: Gabelli, S.B, Bianchet, M.A, Azurmendi, H.F, Mildvan, A.S, Amzel, L.A. Deposit date: 2006-04-27 Release date: 2006-12-12 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.3 Å) Cite: X-ray, NMR, and mutational studies of the catalytic cycle of the GDP-mannose mannosyl hydrolase reaction. Biochemistry, 45, 2006
2B0V	NUDIX hydrolase from Nitrosomonas europaea. Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, NUDIX hydrolase, ... Authors: Osipiuk, J, Skarina, T, Savchenko, A, Edwards, A, Joachimiak, A, MCSG, Midwest Center for Structural Genomics (MCSG) Deposit date: 2005-09-14 Release date: 2005-09-27 Last modified: 2018-01-24 Method: X-RAY DIFFRACTION (1.55 Å) Cite: X-ray structure of NUDIX hydrolase from Nitrosomonas europaea. To be Published
2B06	Crystal structure of the MutT/nudix family protein from Streptococcus pneumoniae Descriptor: MAGNESIUM ION, MutT/nudix family protein Authors: Zhang, R, Zhou, M, Abdullah, J, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) Deposit date: 2005-09-13 Release date: 2006-01-10 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.4 Å) Cite: The 1.4 A crystal structure of the MutT/nudix family protein from Streptococcus pneumoniae To be Published
2I6K	Crystal structure of human type I IPP isomerase complexed with a substrate analog Descriptor: ACETIC ACID, AMINOETHANOLPYROPHOSPHATE, Isopentenyl-diphosphate delta-isomerase 1, ... Authors: Zhang, C, Wei, Z, Gong, W. Deposit date: 2006-08-29 Release date: 2007-06-05 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structures of human IPP isomerase: new insights into the catalytic mechanism J.Mol.Biol., 366, 2007
2I8U	GDP-mannose mannosyl hydrolase-calcium-GDP product complex Descriptor: CALCIUM ION, GDP-mannose mannosyl hydrolase, GUANOSINE-5'-DIPHOSPHATE Authors: Zou, Y, Li, C, Brunzelle, J.S, Nair, S.K. Deposit date: 2006-09-03 Release date: 2007-06-19 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Molecular basis for substrate selectivity and specificity by an LPS biosynthetic enzyme Biochemistry, 46, 2007
2DSD	Crystal structure of human ADP-ribose pyrophosphatase NUDT5 in complex with magnesium and AMP Descriptor: ADENOSINE MONOPHOSPHATE, ADP-sugar pyrophosphatase, MAGNESIUM ION Authors: Zha, M, Zhong, C, Ding, J. Deposit date: 2006-06-28 Release date: 2006-11-14 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal Structures of Human NUDT5 Reveal Insights into the Structural Basis of the Substrate Specificity J.Mol.Biol., 364, 2006
2GT2	Structure of the E. coli GDP-mannose mannosyl hydrolase Descriptor: GDP-mannose mannosyl hydrolase Authors: Gabelli, S.B, Bianchet, M.A, Azurmendi, H.F, MIldvan, A.S, Amzel, L.M. Deposit date: 2006-04-27 Release date: 2006-12-12 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2 Å) Cite: X-ray, NMR, and mutational studies of the catalytic cycle of the GDP-mannose mannosyl hydrolase reaction. Biochemistry, 45, 2006
2FKB	Crystal structure of a putative enzyme (possible Nudix hydrolase) from Escherichia Coli K12 Descriptor: ACETATE ION, GLYCEROL, MAGNESIUM ION, ... Authors: Nocek, B, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) Deposit date: 2006-01-04 Release date: 2006-02-21 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure of a putative enzyme (possible Nudix hydrolase) from Escherichia Coli K12 To be Published
2DSB	Crystal structure of human ADP-ribose pyrophosphatase NUDT5 Descriptor: ADP-sugar pyrophosphatase Authors: Zha, M, Zhong, C, Ding, J. Deposit date: 2006-06-28 Release date: 2006-11-14 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal Structures of Human NUDT5 Reveal Insights into the Structural Basis of the Substrate Specificity J.Mol.Biol., 364, 2006
2G74	Y104F mutant of type 1 isopentenylpyrophosphate-dimethylallylpyrophosphate isomerase Descriptor: Isopentenyl-diphosphate delta-isomerase, MAGNESIUM ION, MANGANESE (II) ION Authors: de Ruyck, J, Wouters, J. Deposit date: 2006-02-27 Release date: 2006-04-18 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.96 Å) Cite: Structural role for Tyr-104 in Escherichia coli isopentenyl-diphosphate isomerase: site-directed mutagenesis, enzymology, and protein crystallography. J.Biol.Chem., 281, 2006
2YYH	Crystal structure of Nudix family protein from Aquifex aeolicus Descriptor: 8-OXO-dGTPase domain Authors: Nakagawa, N, Kishishita, S, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-30 Release date: 2007-11-06 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure of Nudix family protein from Aquifex aeolicus To be Published
2YVP	Crystal structure of NDX2 in complex with MG2+ and ampcpr from thermus thermophilus HB8 Descriptor: MAGNESIUM ION, METHYLENE ADP-BETA-XYLOSE, MutT/nudix family protein Authors: Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-13 Release date: 2008-02-26 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.66 Å) Cite: Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8 J.Bacteriol., 190, 2008
2YVN	Crystal structure of NDX2 from thermus thermophilus HB8 Descriptor: MutT/nudix family protein Authors: Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-13 Release date: 2008-02-26 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.84 Å) Cite: Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8 J.Bacteriol., 190, 2008
2YVM	Crystal structure of NDX2 in complex with MG2+ from thermus thermophilus HB8 Descriptor: MAGNESIUM ION, MutT/nudix family protein Authors: Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-13 Release date: 2008-02-26 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8 J.Bacteriol., 190, 2008
3A6V	Crystal structure of the MutT protein in MN(II) bound holo form Descriptor: L(+)-TARTARIC ACID, MANGANESE (II) ION, Mutator mutT protein, ... Authors: Nakamura, T, Yamagata, Y. Deposit date: 2009-09-09 Release date: 2009-10-27 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural and dynamic features of the MutT protein in the recognition of nucleotides with the mutagenic 8-oxoguanine base J.Biol.Chem., 285, 2010
3A6T	Crystal structure of MutT-8-OXO-DGMP complex Descriptor: 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE, Mutator mutT protein, SODIUM ION, ... Authors: Nakamura, T, Yamagata, Y. Deposit date: 2009-09-09 Release date: 2009-10-27 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.96 Å) Cite: Structural and dynamic features of the MutT protein in the recognition of nucleotides with the mutagenic 8-oxoguanine base J.Biol.Chem., 285, 2010
3AC9	Crystal structure of human NUDT5 complexed with 8-oxo-dGDP and manganese Descriptor: 2'-deoxy-8-oxoguanosine 5'-(trihydrogen diphosphate), ADP-sugar pyrophosphatase, MANGANESE (II) ION Authors: Arimori, T, Yamagata, Y. Deposit date: 2009-12-30 Release date: 2011-01-12 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Diverse substrate recognition and hydrolysis mechanisms of human NUDT5 Nucleic Acids Res., 39, 2011

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