PDB: 72960 resultsInfo pagesStatus searchChemie searchBIRD

---

2QA4	A more complete structure of the the L7/L12 stalk of the Haloarcula marismortui 50S large ribosomal subunit Descriptor: 23S RIBOSOMAL RNA, 50S RIBOSOMAL PROTEIN L31E, 50S ribosomal protein L10e, ... Authors: Steitz, T.A, Kavran, J.M. Deposit date: 2007-06-14 Release date: 2008-04-01 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (3 Å) Cite: Structure of the base of the L7/L12 stalk of the Haloarcula marismortui large ribosomal subunit: Analysis of L11 movements J.Mol.Biol., 371, 2007
5ANR	Structure of a human 4E-T - DDX6 - CNOT1 complex Descriptor: CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1, EUKARYOTIC TRANSLATION INITIATION FACTOR 4E TRANSPORTER, PROBABLE ATP-DEPENDENT RNA HELICASE DDX6 Authors: Basquin, J, Oezguer, S, Conti, E. Deposit date: 2015-09-08 Release date: 2015-10-21 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.102 Å) Cite: Structure of a Human 4E-T/Ddx6/Cnot1 Complex Reveals the Different Interplay of Ddx6-Binding Proteins with the Ccr4-not Complex. Cell Rep., 13, 2015
5LVF	Solution structure of Rtt103 CTD-interacting domain bound to a Thr4 phosphorylated CTD peptide Descriptor: PRO-SER-TYR-SER-PRO-PTH-SER-PRO-SER-TYR-SER-PRO-THR-SER-PRO-SER, Regulator of Ty1 transposition protein 103 Authors: Jasnovidova, O, Kubicek, K, Krejcikova, M, Stefl, R. Deposit date: 2016-09-14 Release date: 2017-05-10 Last modified: 2019-10-30 Method: SOLUTION NMR Cite: Structural insight into recognition of phosphorylated threonine-4 of RNA polymerase II C-terminal domain by Rtt103p. EMBO Rep., 18, 2017
2EHG	Crystal structure of hyperthermophilic archaeal RNase HI Descriptor: ribonuclease HI Authors: You, D.J, Chon, H, Koga, Y, Takano, K, Kanaya, S. Deposit date: 2007-03-06 Release date: 2007-09-11 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystal Structure of Type 1 RNase H from a Hyperthermophilic Archaeon with Double-stranded RNA-dependent RNase Activity To be Published
6O3P	Crystal structure of the catalytic domain of mouse Nudt12 in complex with AMP and 3 Mg2+ ions Descriptor: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, Peroxisomal NADH pyrophosphatase NUDT12, ... Authors: Tong, L, Wu, Y. Deposit date: 2019-02-27 Release date: 2019-05-29 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural and mechanistic basis of mammalian Nudt12 RNA deNADding. Nat.Chem.Biol., 15, 2019
8ASD	Structure of the SFTSV L protein stalled at late elongation [LATE-ELONGATION] Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, MAGNESIUM ION, RNA (5'-R(P*AP*AP*AP*AP*AP*AP*GP*AP*UP*CP*UP*GP*GP*GP*CP*GP*GP*UP*CP*UP*UP*UP*GP*UP*GP*U)-3'), ... Authors: Williams, H.M, Thorkelsson, S.R, Vogel, D, Milewski, M, Busch, C, Cusack, S, Grunewald, K, Quemin, E.R.J, Rosenthal, M. Deposit date: 2022-08-19 Release date: 2023-01-18 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (2.6 Å) Cite: Structural insights into viral genome replication by the severe fever with thrombocytopenia syndrome virus L protein. Nucleic Acids Res., 51, 2023
7W89	The structure of Deinococcus radiodurans Yqgf Descriptor: Putative pre-16S rRNA nuclease Authors: Cheng, K. Deposit date: 2021-12-07 Release date: 2022-08-17 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.500061 Å) Cite: Biochemical and Structural Study of RuvC and YqgF from Deinococcus radiodurans. Mbio, 13, 2022
3O2S	Crystal structure of the human symplekin-Ssu72 complex Descriptor: PHOSPHATE ION, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, Symplekin Authors: Tong, L, Xiang, K. Deposit date: 2010-07-22 Release date: 2010-10-06 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal structure of the human symplekin-Ssu72-CTD phosphopeptide complex. Nature, 467, 2010
5O1Y	Structure of Nrd1 RNA binding domain in complex with RNA (GUAA) Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Protein NRD1, ... Authors: Franco-Echevarria, E, Perez-Canadillas, J.M, Gonzalez, B. Deposit date: 2017-05-19 Release date: 2017-08-02 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.45 Å) Cite: The structure of transcription termination factor Nrd1 reveals an original mode for GUAA recognition. Nucleic Acids Res., 45, 2017
8CX0	Cryo-EM structure of human APOBEC3G/HIV-1 Vif/CBFbeta/ELOB/ELOC monomeric complex Descriptor: Core-binding factor subunit beta, DNA dC->dU-editing enzyme APOBEC-3G, Elongin-B, ... Authors: Li, Y, Langley, C, Azumaya, C.M, Echeverria, I, Chesarino, N.M, Emerman, M, Cheng, Y, Gross, J.D. Deposit date: 2022-05-19 Release date: 2023-02-15 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: The structural basis for HIV-1 Vif antagonism of human APOBEC3G. Nature, 615, 2023
7OPI	Structure of a minimal SF3B core in complex with the inactive modulator spliceostatin E (form I) Descriptor: PHD finger-like domain-containing protein 5A, Spliceostatin E (form I), Splicing factor 3B subunit 1, ... Authors: Cretu, C, Pena, V. Deposit date: 2021-05-31 Release date: 2021-08-04 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structural basis of intron selection by U2 snRNP in the presence of covalent inhibitors. Nat Commun, 12, 2021
7OMF	Structure of a minimal SF3B core in complex with sudemycin D6 (form I) Descriptor: PHD finger-like domain-containing protein 5A, Splicing factor 3B subunit 1, Splicing factor 3B subunit 3, ... Authors: Cretu, C, Pena, V. Deposit date: 2021-05-21 Release date: 2021-08-04 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural basis of intron selection by U2 snRNP in the presence of covalent inhibitors. Nat Commun, 12, 2021
5MKO	[2Fe-2S] cluster containing TtuA in complex with AMP. Descriptor: ADENOSINE MONOPHOSPHATE, FE2/S2 (INORGANIC) CLUSTER, TtuA PH0300, ... Authors: Arragain, S, Bimai, O, Legrand, P, Golinelli-Pimpaneau, B. Deposit date: 2016-12-05 Release date: 2017-06-14 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.65 Å) Cite: Nonredox thiolation in tRNA occurring via sulfur activation by a [4Fe-4S] cluster. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6XKB	Crystal structure of SR-related and CTD-associated factor 4(SCAF4-CID)with peptide S2,S5p-CTD Descriptor: S2,S5p-CTD peptide, SR-related and CTD-associated factor 4, UNKNOWN ATOM OR ION Authors: Zhou, M.Q, Dong, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC) Deposit date: 2020-06-26 Release date: 2021-01-20 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural basis for the recognition of the S2, S5-phosphorylated RNA polymerase II CTD by the mRNA anti-terminator protein hSCAF4. Febs Lett., 596, 2022
5H1J	Crystal structure of WD40 repeat domains of Gemin5 Descriptor: Gem-associated protein 5 Authors: Jin, W, Wang, Y, Liu, C.P, Yang, N, Jin, M, Cong, Y, Wang, M, Xu, R.M. Deposit date: 2016-10-10 Release date: 2016-11-23 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural basis for snRNA recognition by the double-WD40 repeat domain of Gemin5 Genes Dev., 30, 2016
1GU4	Crystal structure of C/EBPBETA BZIP homodimer bound to a high affinity DNA fragment Descriptor: 5'-D(*AP*AP*TP*AP*TP*TP*GP*CP*GP*CP* AP*AP*TP*CP*CP*T)-3', 5'-D(*TP*AP*GP*GP*AP*TP*TP*GP*CP*GP* CP*AP*AP*TP*AP*T)-3', CAAT/ENHANCER BINDING PROTEIN BETA Authors: Tahirov, T.H, Ogata, K. Deposit date: 2002-01-23 Release date: 2003-06-26 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural Basis for Flexible Base Recognition by C/Ebpbeta To be Published
1GU5	Crystal structure of C/EBPBETA BZIP homodimer bound to a DNA fragment from the MIM-1 promoter Descriptor: 5'-D(*AP*TP*GP*AP*TP*TP*GP*GP*CP*CP* AP*AP*CP*AP*CP*A)-3', 5'-D(*TP*TP*GP*TP*GP*TP*TP*GP*GP*CP* CP*AP*AP*TP*CP*A)-3', CAAT/ENHANCER BINDING PROTEIN BETA Authors: Tahirov, T.H, Ogata, K. Deposit date: 2002-01-24 Release date: 2003-06-26 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural Basis for Flexible Base Recognition by C/Ebpbeta To be Published
1GTW	crystal structure of C/EBPbeta bZip homodimer bound to a DNA fragment from the tom-1A promoter Descriptor: 5'-D(*AP*AP*TP*GP*TP*GP*GP*CP*GP*CP* AP*AP*TP*CP*CP*T)-3', 5'-D(*TP*AP*GP*GP*AP*TP*TP*GP*CP*GP* CP*CP*AP*CP*AP*T)-3', CAAT/ENHANCER BINDING PROTEIN BETA Authors: Tahirov, T.H, Ogata, K. Deposit date: 2002-01-22 Release date: 2004-02-06 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Structural Basis for Flexible Base Recognition by C/Ebpbeta To be Published
8R2D	Integrator cleavage module assembly intermediate Descriptor: BRCA1-associated ATM activator 1, Integrator complex subunit 11, Integrator complex subunit 4, ... Authors: Sabath, K, Qiu, C, Jonas, S. Deposit date: 2023-11-03 Release date: 2024-07-31 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Assembly mechanism of Integrator's RNA cleavage module. Mol.Cell, 2024
5H1M	Crystal structure of WD40 repeat domains of Gemin5 in complex with M7G Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, Gem-associated protein 5 Authors: Jin, W, Wang, Y, Liu, C.P, Yang, N, Jin, M, Cong, Y, Wang, M, Xu, R.M. Deposit date: 2016-10-10 Release date: 2016-11-23 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.492 Å) Cite: Structural basis for snRNA recognition by the double-WD40 repeat domain of Gemin5 Genes Dev., 30, 2016
2ZJP	Thiopeptide antibiotic Nosiheptide bound to the large ribosomal subunit of Deinococcus radiodurans Descriptor: 4-(hydroxymethyl)-3-methyl-1H-indole-2-carboxylic acid, 50S RIBOSOMAL PROTEIN L11, 50S RIBOSOMAL PROTEIN L13, ... Authors: Harms, J.M, Wilson, D.N, Schluenzen, F, Connell, S.R, Stachelhaus, T, Zaborowska, Z, Spahn, C.M.T, Fucini, P. Deposit date: 2008-03-07 Release date: 2008-06-17 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (3.7 Å) Cite: Translational Regulation Via L11: Molecular Switches on the Ribosome Turned on and Off by Thiostrepton and Micrococcin. Mol.Cell, 30, 2008
4ADX	The Cryo-EM Structure of the Archaeal 50S Ribosomal Subunit in Complex with Initiation Factor 6 Descriptor: 23S Ribosomal RNA EXPANSION SEGMENTS, 23S ribosomal RNA, 5S Ribosomal RNA, ... Authors: Greber, B.J, Boehringer, D, Godinic-Mikulcic, V, Crnkovic, A, Ibba, M, Weygand-Durasevic, I, Ban, N. Deposit date: 2012-01-04 Release date: 2012-02-08 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (6.6 Å) Cite: Cryo-Em Structure of the Archaeal 50S Ribosomal Subunit in Complex with Initiation Factor 6 and Implications for Ribosome Evolution J.Mol.Biol., 418, 2012
2C77	EF-Tu complexed with a GTP analog and the antibiotic GE2270 A Descriptor: DI(HYDROXYETHYL)ETHER, ELONGATION FACTOR TU-B, MAGNESIUM ION, ... Authors: Parmeggiani, A, Krab, I.M, Okamura, S, Nielsen, R.C, Nyborg, J, Nissen, P. Deposit date: 2005-11-18 Release date: 2006-03-16 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural basis of the action of pulvomycin and GE2270 A on elongation factor Tu. Biochemistry, 45, 2006
2QEX	Negamycin Binds to the Wall of the Nascent Chain Exit Tunnel of the 50S Ribosomal Subunit Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10e, 50S ribosomal protein L11P, ... Authors: Schroeder, S.J, Blaha, G. Deposit date: 2007-06-26 Release date: 2008-09-30 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Negamycin binds to the wall of the nascent chain exit tunnel of the 50S ribosomal subunit. Antimicrob.Agents Chemother., 51, 2007
6IFN	Crystal structure of Type III-A CRISPR Csm complex Descriptor: MANGANESE (II) ION, RNA (32-MER), Type III-A CRISPR-associated RAMP protein Csm3, ... Authors: You, L, Wang, J, Wang, Y. Deposit date: 2018-09-20 Release date: 2018-12-12 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Structure Studies of the CRISPR-Csm Complex Reveal Mechanism of Co-transcriptional Interference Cell, 176, 2019

<552553554555556557558559560561562563564565566567>