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6T0V
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BU of 6t0v by Molmil
Bat Influenza A polymerase elongation complex with incoming UTP analogue (complete polymerase)
Descriptor: 3' vRNA, 5' vRNA, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, ...
Authors:Wandzik, J.M, Kouba, T, Cusack, S.
Deposit date:2019-10-03
Release date:2020-04-15
Last modified:2025-07-09
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:A Structure-Based Model for the Complete Transcription Cycle of Influenza Polymerase.
Cell, 181, 2020
5MJB
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BU of 5mjb by Molmil
Kinase domain of human EphB1, G703C mutant, covalently bound to a quinazoline-based inhibitor
Descriptor: 2-chloranyl-~{N}-[4-[(2-chloranyl-5-oxidanyl-phenyl)amino]quinazolin-7-yl]ethanamide, Ephrin type-B receptor 1, SULFATE ION
Authors:Kung, A, Schimpl, M, Chen, Y.-C, Overman, R.C, Zhang, C.
Deposit date:2016-11-30
Release date:2017-05-17
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:A Chemical-Genetic Approach to Generate Selective Covalent Inhibitors of Protein Kinases.
ACS Chem. Biol., 12, 2017
8TW0
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BU of 8tw0 by Molmil
Crystal Structure of a synthetic ABC heterotrimeric Collagen-like Peptide at 1.53 A
Descriptor: Collagen Mimetic Peptide A, Collagen Mimetic Peptide B, Collagen Mimetic Peptide C, ...
Authors:Miller, M.D, Cole, C.C, Xu, W, Walker, D.R, Hulgan, S.A.H, Pogostin, B.H, Swain, J.W.R, Duella, R, Misiura, M, Wang, X, Kolomeisky, A.B, Phillips Jr, G.N, Hartgerink, J.D.
Deposit date:2023-08-18
Release date:2024-05-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Heterotrimeric collagen helix with high specificity of assembly results in a rapid rate of folding.
Nat.Chem., 16, 2024
6WEX
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BU of 6wex by Molmil
Crystal Structure of Broadly Neutralizing Antibody 3I14-D93N Mutant Bound to the Influenza A H6 Hemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, Hemagglutinin HA2 chain, ...
Authors:Harshbarger, W.D, Lockbaum, G.J, Deming, D.T, Attatippaholkun, N, Schiffer, C.A, Marasco, W.A.
Deposit date:2020-04-03
Release date:2020-11-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Unique structural solution from a V H 3-30 antibody targeting the hemagglutinin stem of influenza A viruses.
Nat Commun, 12, 2021
6T3C
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BU of 6t3c by Molmil
Crystal structure of PI3Kgamma in complex with DNA-PK inhibitor AZD7648
Descriptor: 7-methyl-2-[(7-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)amino]-9-(oxan-4-yl)purin-8-one, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform
Authors:Schimpl, M, Goldberg, F.W, Finlay, M.R.V, Ting, A.K.T, Beattie, D, Lamont, G.M, Fallan, C, Wrigley, G.L, Howard, M.R, Williamson, B, Davies, B.R, Cadogan, E.B, Ramos-Montoya, A, Dean, E.
Deposit date:2019-10-10
Release date:2020-01-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:The Discovery of 7-Methyl-2-[(7-methyl[1,2,4]triazolo[1,5-a]pyridin-6-yl)amino]-9-(tetrahydro-2H-pyran-4-yl)-7,9-dihydro-8H-purin-8-one (AZD7648), a Potent and Selective DNA-Dependent Protein Kinase (DNA-PK) Inhibitor.
J.Med.Chem., 63, 2020
8RQ9
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BU of 8rq9 by Molmil
Crystal structure of PROTAC CFT-1297 in complex with CRBN-midi and BRD4(BD2)
Descriptor: (3~{S})-3-[7-[1-[7-[4-[6-(4-chlorophenyl)-1-methyl-spiro[[1,2,4]triazolo[4,3-a][1,4]benzodiazepine-4,1'-cyclopropane]-8-yl]pyrazol-1-yl]heptyl]piperidin-4-yl]-3-oxidanylidene-1~{H}-isoindol-2-yl]piperidine-2,6-dione, Bromodomain-containing protein 4, Protein cereblon, ...
Authors:Darren, D, Ramachandran, S, Kroupova, A, Zollman, D, Ciulli, A.
Deposit date:2024-01-17
Release date:2024-09-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Design of a Cereblon construct for crystallographic and biophysical studies of protein degraders.
Nat Commun, 15, 2024
8CKO
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BU of 8cko by Molmil
PBP AccA from A.tumefaciens C58 in complex with agrocinopine C-like
Descriptor: 2-O-phosphono-alpha-D-glucopyranose, 2-O-phosphono-beta-D-glucopyranose, ABC transporter substrate-binding protein, ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2023-02-16
Release date:2024-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.421 Å)
Cite:A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity.
Biochem.J., 481, 2024
4LRT
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BU of 4lrt by Molmil
Crystal and solution structures of the bifunctional enzyme (Aldolase/Aldehyde dehydrogenase) from Thermomonospora curvata, reveal a cofactor-binding domain motion during NAD+ and CoA accommodation whithin the shared cofactor-binding site
Descriptor: 4-hydroxy-2-oxovalerate aldolase, Acetaldehyde dehydrogenase, COENZYME A, ...
Authors:Fischer, B, Branlant, G, Talfournier, F, Gruez, A.
Deposit date:2013-07-20
Release date:2013-09-04
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal and solution structures of the bifunctional enzyme (Aldolase/Aldehyde dehydrogenase) from Thermomonospora curvata, reveal a cofactor-binding domain motion during NAD+ and CoA accommodation whithin the shared cofactor-binding site
To be Published
6TVA
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BU of 6tva by Molmil
Crystal structure of the haemagglutinin from a transmissible H10N7 seal influenza virus isolated in Netherland in complex with avian receptor analogue, 3'-SLN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Haemagglutinin HA1, Haemagglutinin HA2, ...
Authors:Zhang, J, Xiong, X, Purkiss, A, Walker, P, Gamblin, S, Skehel, J.J.
Deposit date:2020-01-09
Release date:2020-10-21
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Hemagglutinin Traits Determine Transmission of Avian A/H10N7 Influenza Virus between Mammals.
Cell Host Microbe, 28, 2020
6QW2
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BU of 6qw2 by Molmil
The Transcriptional Regulator PrfA-A218G mutant from Listeria Monocytogenes
Descriptor: ISOPROPYL ALCOHOL, Listeriolysin positive regulatory factor A, SODIUM ION
Authors:Hall, M, Grundstrom, C, Hansen, S, Brannstrom, K, Johansson, J, Sauer-Eriksson, A.E.
Deposit date:2019-03-05
Release date:2020-04-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Novel Growth-Based Selection Strategy Identifies New Constitutively Active Variants of the Major Virulence Regulator PrfA in Listeria monocytogenes.
J.Bacteriol., 202, 2020
6CP5
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BU of 6cp5 by Molmil
Monomer yeast ATP synthase Fo reconstituted in nanodisc with inhibitor of oligomycin bound generated from focused refinement.
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, mitochondrial, ...
Authors:Srivastava, A.P, Luo, M, Symersky, J, Liao, M.F, Mueller, D.M.
Deposit date:2018-03-13
Release date:2018-04-11
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:High-resolution cryo-EM analysis of the yeast ATP synthase in a lipid membrane.
Science, 360, 2018
7KGC
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BU of 7kgc by Molmil
Crystal structure of a perchloric acid-soluble protein (PSP) from Trichomonas vaginalis at 1.95 A
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Putative translation initiation inhibitor
Authors:Diaz-Vilchis, A, Rudino-Pinera, E, Alvarez-Sanchez, M.E, Arreola, R.
Deposit date:2020-10-16
Release date:2021-10-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A Putative New Role of Tv-PSP1 Recognizes IRE and ERE Hairpin Structures from Trichomonas vaginalis.
Pathogens, 12, 2023
5K7H
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BU of 5k7h by Molmil
Crystal structure of AibR in complex with the effector molecule isovaleryl coenzyme A
Descriptor: CHLORIDE ION, Isovaleryl-coenzyme A, NICKEL (II) ION, ...
Authors:Bock, T, Volz, C, Mueller, R, Blankenfeldt, W.
Deposit date:2016-05-26
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The AibR-isovaleryl coenzyme A regulator and its DNA binding site - a model for the regulation of alternative de novo isovaleryl coenzyme A biosynthesis in Myxococcus xanthus.
Nucleic Acids Res., 45, 2017
7YXM
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BU of 7yxm by Molmil
Benzoylsuccinyl-CoA thiolase with coenzyme A
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Benzoylsuccinyl-CoA thiolase subunit, ...
Authors:Ermler, U, Heider, J, Weidenweber, S.
Deposit date:2022-02-16
Release date:2022-04-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Finis tolueni: a new type of thiolase with an integrated Zn-finger subunit catalyzes the final step of anaerobic toluene metabolism.
Febs J., 289, 2022
7Z21
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BU of 7z21 by Molmil
BAF A12T bound to the lamin A/C Ig-fold domain
Descriptor: Barrier-to-autointegration factor, N-terminally processed, CHLORIDE ION, ...
Authors:Marcelot, A, Legrand, P, Zinn-Justin, S.
Deposit date:2022-02-25
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.629 Å)
Cite:The BAF A12T mutation disrupts lamin A/C interaction, impairing robust repair of nuclear envelope ruptures in Nestor-Guillermo progeria syndrome cells.
Nucleic Acids Res., 50, 2022
8G30
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BU of 8g30 by Molmil
N2 neuraminidase of A/Tanzania/205/2010 H3N2 in complex with 4 FNI19 Fab molecules
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FNI19 Fab heavy chain, ...
Authors:Dang, H.V, Snell, G.
Deposit date:2023-02-06
Release date:2023-05-31
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:A pan-influenza antibody inhibiting neuraminidase via receptor mimicry.
Nature, 618, 2023
3DTC
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BU of 3dtc by Molmil
Crystal structure of mixed-lineage kinase MLK1 complexed with compound 16
Descriptor: 12-(2-hydroxyethyl)-2-(1-methylethoxy)-13,14-dihydronaphtho[2,1-a]pyrrolo[3,4-c]carbazol-5(12H)-one, Mitogen-activated protein kinase kinase kinase 9, SULFATE ION
Authors:Fedorov, A.A, Fedorov, E.V, Meyer, S.L, Hudkins, R.L, Almo, S.C.
Deposit date:2008-07-14
Release date:2009-03-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Mixed-lineage kinase 1 and mixed-lineage kinase 3 subtype-selective dihydronaphthyl[3,4-a]pyrrolo[3,4-c]carbazole-5-ones: optimization, mixed-lineage kinase 1 crystallography, and oral in vivo activity in 1-methyl-4-phenyltetrahydropyridine models.
J.Med.Chem., 51, 2008
8G3Q
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BU of 8g3q by Molmil
N2 neuraminidase of A/Tanzania/205/2010 H3N2 in complex with 3 FNI17 Fab molecules
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FNI17 Fab heavy chain, ...
Authors:Dang, H.V, Snell, G.
Deposit date:2023-02-08
Release date:2023-05-31
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:A pan-influenza antibody inhibiting neuraminidase via receptor mimicry.
Nature, 618, 2023
7RSA
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BU of 7rsa by Molmil
STRUCTURE OF PHOSPHATE-FREE RIBONUCLEASE A REFINED AT 1.26 ANGSTROMS
Descriptor: RIBONUCLEASE A, TERTIARY-BUTYL ALCOHOL
Authors:Wlodawer, A, Gilliland, G.L.
Deposit date:1988-06-10
Release date:1988-10-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Structure of phosphate-free ribonuclease A refined at 1.26 A.
Biochemistry, 27, 1988
7A1G
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BU of 7a1g by Molmil
Structure of a crosslinked yeast ABCE1-bound 43S pre-initiation complex
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Mackens-Kiani, T, Kratzat, H, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
Deposit date:2020-08-13
Release date:2020-10-14
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A structural inventory of native ribosomal ABCE1-43S pre-initiation complexes.
Embo J., 40, 2021
6R1V
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BU of 6r1v by Molmil
Solution structure of sortase A from S. aureus in complex with 2-(aminomethyl)-3-hydroxy-4H-pyran-4-one based prodrug
Descriptor: 6-(hydroxymethyl)-3-oxidanyl-2-(thiophen-3-ylmethyl)pyran-4-one, Sortase A
Authors:Jaudzems, K, Leonchiks, A.
Deposit date:2019-03-15
Release date:2020-01-22
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Targeting Bacterial Sortase A with Covalent Inhibitors: 27 New Starting Points for Structure-Based Hit-to-Lead Optimization.
Acs Infect Dis., 6, 2020
7SEG
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BU of 7seg by Molmil
Crystal structure of the complex of CD16A bound by an anti-CD16A Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Kiefer, J.R, Wallweber, H.A, Polson, A.G.
Deposit date:2021-09-30
Release date:2021-11-24
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.156 Å)
Cite:A BCMA/CD16A bispecific innate cell engager for the treatment of multiple myeloma.
Leukemia, 36, 2022
9GAQ
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BU of 9gaq by Molmil
CryoEM structure of influenza A RNP-like particle double-stranded assembled with a 14-mer RNA.
Descriptor: Nucleoprotein, RNA (5'-P(UC)7-FAM3')
Authors:Chenavier, F, Ruigrok, R.W.H, Schoehn, G, Ballandras-Colas, A, Crepin, T.
Deposit date:2024-07-29
Release date:2025-01-15
Last modified:2025-02-12
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Influenza a virus antiparallel helical nucleocapsid-like pseudo-atomic structure.
Nucleic Acids Res., 53, 2025
9GAP
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BU of 9gap by Molmil
CryoEM structure of influenza A RNP-like particle double-stranded assembled with a 12-mer RNA.
Descriptor: 2-[3,6-bis(oxidanylidene)-4,5-dihydroxanthen-9-yl]-4-[3-[(2R)-2-oxidanylpropoxy]propylcarbamoyl]benzoic acid, Nucleoprotein, RNA (5'-P(UC)6-FAM3')
Authors:Chenavier, F, Ruigrok, R.W.H, Schoehn, G, Ballandras-Colas, A, Crepin, T.
Deposit date:2024-07-29
Release date:2025-01-15
Last modified:2025-02-12
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Influenza a virus antiparallel helical nucleocapsid-like pseudo-atomic structure.
Nucleic Acids Res., 53, 2025
9GAS
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BU of 9gas by Molmil
Focused reconstruction on strand 2 of the influenza A RNP-like particle double-stranded assembled with a 18-mer RNA.
Descriptor: 2-[3,6-bis(oxidanylidene)-4,5-dihydroxanthen-9-yl]-4-[3-[(2R)-2-oxidanylpropoxy]propylcarbamoyl]benzoic acid, Nucleoprotein, RNA (5'-P(UC)9-FAM3')
Authors:Chenavier, F, Ruigrok, R.W.H, Schoehn, G, Ballandras-Colas, A, Crepin, T.
Deposit date:2024-07-29
Release date:2025-01-15
Last modified:2025-02-12
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Influenza a virus antiparallel helical nucleocapsid-like pseudo-atomic structure.
Nucleic Acids Res., 53, 2025

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