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3PW0	Ternary complex of Aflatoxin B1 Adduct modified DNA (AFB1-FAPY) with DNA Polymerase IV and incoming dATP Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3'), ... Authors: Banerjee, S. Deposit date: 2010-12-07 Release date: 2011-08-10 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.91 Å) Cite: Bypass of Aflatoxin B(1) Adducts by the Sulfolobus solfataricus DNA Polymerase IV. J.Am.Chem.Soc., 133, 2011
3PW7	Ternary complex of Aflatoxin B1 Adduct modified DNA (AFB1-N7-Gua) with DNA Polymerase IV and incoming dCTP Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1, CALCIUM ION, ... Authors: Banerjee, S. Deposit date: 2010-12-07 Release date: 2011-08-10 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Bypass of Aflatoxin B(1) Adducts by the Sulfolobus solfataricus DNA Polymerase IV. J.Am.Chem.Soc., 133, 2011
3PW2	Ternary complex of Aflatoxin B1 Adduct modified DNA (AFB1-FAPY) with DNA Polymerase IV and incoming dTTP Descriptor: CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3'), DNA (5'-D(*TP*TP*(PVX)P*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3'), ... Authors: Banerjee, S. Deposit date: 2010-12-07 Release date: 2011-08-10 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.74 Å) Cite: Bypass of Aflatoxin B(1) Adducts by the Sulfolobus solfataricus DNA Polymerase IV. J.Am.Chem.Soc., 133, 2011
3PW5	Ternary complex of Aflatoxin B1 Adduct modified DNA (AFB1-N7-Gua) with DNA Polymerase IV and incoming dTTP Descriptor: 8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3'), ... Authors: Banerjee, S. Deposit date: 2010-12-07 Release date: 2011-08-10 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3 Å) Cite: Bypass of Aflatoxin B(1) Adducts by the Sulfolobus solfataricus DNA Polymerase IV. J.Am.Chem.Soc., 133, 2011
3PW4	Ternary complex of Aflatoxin B1 Adduct modified DNA (AFB1-N7-Gua) with DNA Polymerase IV and incoming dATP Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1, CALCIUM ION, ... Authors: Banerjee, S. Deposit date: 2010-12-07 Release date: 2011-08-10 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Bypass of Aflatoxin B(1) Adducts by the Sulfolobus solfataricus DNA Polymerase IV. J.Am.Chem.Soc., 133, 2011
2W9A	Ternary complex of Dpo4 bound to N2,N2-dimethyl-deoxyguanosine modified DNA with incoming dGTP Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*CP*DOC)-3', 5'-D(*TP*CP*AP*CP*O2GP*GP*AP*AP*TP*CP *CP*TP*TP*CP*CP*CP*CP*C)-3', ... Authors: Eoff, R.L, Zhang, H, Kosekov, I.D, Rizzo, C.J, Egli, M, Guengerich, F.P. Deposit date: 2009-01-22 Release date: 2009-05-12 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structure-Function Relationships in Miscoding by Sulfolobus Solfataricus DNA Polymerase Dpo4: Guanine N2,N2-Dimethyl Substitution Produces Inactive and Miscoding Polymerase Complexes. J.Biol.Chem., 284, 2009
2W9C	Ternary complex of Dpo4 bound to N2,N2-dimethyl-deoxyguanosine modified DNA with incoming dTTP Descriptor: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*DOCP)-3', 5'-D(*TP*CP*AP*CP*O2GP*GP*AP*AP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3', DNA POLYMERASE IV, ... Authors: Eoff, R.L, Zhang, H, Kosekov, I.D, Rizzo, C.J, Egli, M, Guengerich, F.P. Deposit date: 2009-01-22 Release date: 2009-05-12 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Structure-Function Relationships in Miscoding by Sulfolobus Solfataricus DNA Polymerase Dpo4: Guanine N2,N2-Dimethyl Substitution Produces Inactive and Miscoding Polymerase Complexes. J.Biol.Chem., 284, 2009
5TGG	Solution structure of parallel stranded adenosine duplex Descriptor: RNA/DNA (5'-D(P*T)-R(*(A2M)P*(A2M)P*(A2M)P*(A2M))-D(P*A)-R(P*(A2M)P*(A2M)P*(A2M))-3') Authors: Denisov, A, Noronha, A, Gehring, K, Wilds, C. Deposit date: 2016-09-27 Release date: 2017-08-09 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Influence of nucleotide modifications at the C2' position on the Hoogsteen base-paired parallel-stranded duplex of poly(A) RNA. Nucleic Acids Res., 45, 2017
2K3R	Pfu Rpp21 structure and assignments Descriptor: Ribonuclease P protein component 4, ZINC ION Authors: Amero, C.D, Foster, M.P, Boomershine, W.P, Xu, Y. Deposit date: 2008-05-15 Release date: 2008-12-02 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Solution structure of Pyrococcus furiosus RPP21, a component of the archaeal RNase P holoenzyme, and interactions with its RPP29 protein partner. Biochemistry, 47, 2008
7EEZ	crystal structure of maize SHH2 SAWADEE domain Descriptor: HB transcription factor, ZINC ION Authors: Wang, Y, Du, J. Deposit date: 2021-03-20 Release date: 2021-06-30 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.902 Å) Cite: Recognition of H3K9me1 by maize RNA-directed DNA methylation factor SHH2. J Integr Plant Biol, 63, 2021
2M5U	NMR structure of the P4 hairpin of the CPEB3 ribozyme Descriptor: RNA_(5'-R(*GP*GP*CP*AP*GP*AP*UP*UP*CP*UP*GP*GP*UP*GP*AP*AP*UP*CP*UP*GP*CP*C)-3') Authors: Skilandat, M, Rowinska-Zyrek, M, Sigel, R.K.O. Deposit date: 2013-03-08 Release date: 2014-04-02 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution structure and metal ion binding sites of the human CPEB3 ribozyme's P4 domain. J.Biol.Inorg.Chem., 19, 2014
2MXL	Structural features of a 3' splice site in influenza A: 39-nt hairpin Descriptor: RNA (39-MER) Authors: Turner, D.H, Kennedy, S.D, Chen, J.L. Deposit date: 2015-01-06 Release date: 2015-05-06 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural features of a 3' splice site in influenza a. Biochemistry, 54, 2015
7WIA	The apo-form of THF-II C22G riboswitch Descriptor: RNA (50-MER) Authors: Xu, L, Fang, X, Xiao, Y. Deposit date: 2022-01-03 Release date: 2023-01-18 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (3.22 Å) Cite: Structural insights into translation regulation by the THF-II riboswitch. Nucleic Acids Res., 51, 2023
8PO8	Structure of Escherichia coli HrpA in complex with ADP and oligonucleotide poly(dC)11 forming an i-motif Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase HrpA, DNA (5'-D(P*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*C)-3'), ... Authors: Xin, B.G, Yuan, L.G, Zhang, L.L, Xie, S.M, Liu, N.N, Ai, X, Li, H.H, Rety, S, Xi, X.G. Deposit date: 2023-07-03 Release date: 2024-05-08 Method: X-RAY DIFFRACTION (2.52 Å) Cite: Structural insights into the N-terminal APHB domain of HrpA: mediating canonical and i-motif recognition. Nucleic Acids Res., 52, 2024
8PO6	Structure of Escherichia coli HrpA apo form Descriptor: ATP-dependent RNA helicase HrpA, PHOSPHATE ION Authors: Xin, B.G, Yuan, L.G, Zhang, L.L, Xie, S.M, Liu, N.N, Ai, X, Li, H.H, Rety, S, Xi, X.G. Deposit date: 2023-07-03 Release date: 2024-05-08 Method: X-RAY DIFFRACTION (2.66 Å) Cite: Structural insights into the N-terminal APHB domain of HrpA: mediating canonical and i-motif recognition. Nucleic Acids Res., 52, 2024
8PO7	Structure of Escherichia coli HrpA in complex with ADP and dinucleotide dCdC Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase HrpA, DNA (5'-D(P*CP*C)-3'), ... Authors: Xin, B.G, Yuan, L.G, Zhang, L.L, Xie, S.M, Liu, N.N, Ai, X, Li, H.H, Rety, S, Xi, X.G. Deposit date: 2023-07-03 Release date: 2024-05-08 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (2.26 Å) Cite: Structural insights into the N-terminal APHB domain of HrpA: mediating canonical and i-motif recognition. Nucleic Acids Res., 52, 2024
4E89	Crystal Structure of RnaseH from gammaretrovirus Descriptor: CADMIUM ION, MAGNESIUM ION, RNase H Authors: Kim, J.H, Kim, S.J. Deposit date: 2012-03-19 Release date: 2012-10-17 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal structure of xenotropic murine leukaemia virus-related virus (XMRV) ribonuclease H Biosci.Rep., 32, 2012
1FMD	THE STRUCTURE AND ANTIGENICITY OF A TYPE C FOOT-AND-MOUTH DISEASE VIRUS Descriptor: FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP1), FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP2), FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP3), ... Authors: Lea, S, Fry, E, Stuart, D. Deposit date: 1994-02-10 Release date: 1994-08-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (3.5 Å) Cite: The structure and antigenicity of a type C foot-and-mouth disease virus. Structure, 2, 1994
2WV5	Crystal structure of foot-and-mouth disease virus 3C protease in complex with a decameric peptide corresponding to the VP1-2A cleavage junction with a GLN to Glu substitution at P1 Descriptor: FOOT AND MOUTH DISEASE VIRUS (SEROTYPE A) VARIANT VP1 CAPSID PROTEIN, PICORNAIN 3C Authors: Zunszain, P.A, Knox, S.R, Sweeney, T.R, Yang, J, Roque-Rosell, N, Belsham, G.J, Leatherbarrow, R.J, Curry, S. Deposit date: 2009-10-13 Release date: 2009-10-27 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Insights Into Cleavage Specificity from the Crystal Structure of Foot-and-Mouth Disease Virus 3C Protease Complexed with a Peptide Substrate. J.Mol.Biol., 395, 2010
2WV4	Crystal structure of foot-and-mouth disease virus 3C protease in complex with a decameric peptide corresponding to the VP1-2A cleavage junction Descriptor: FOOT AND MOUTH DISEASE VIRUS (SEROTYPE A) VARIANT VP1 CAPSID PROTEIN, PICORNAIN 3C Authors: Zunszain, P.A, Knox, S.R, Sweeney, T.R, Yang, J, Roque-Rosell, N, Belsham, G.J, Leatherbarrow, R.J, Curry, S. Deposit date: 2009-10-13 Release date: 2009-10-27 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Insights Into Cleavage Specificity from the Crystal Structure of Foot-and-Mouth Disease Virus 3C Protease Complexed with a Peptide Substrate. J.Mol.Biol., 395, 2010
7RS6	Cryo-EM structure of Kip3 (AMPPNP) bound to GMPCPP-Stabilized Microtubules Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... Authors: Hernandez-Lopez, R.A, Leschziner, A.E, Arellano-Santoyo, H, Pellman, D, Stokasimov, E, Wang, R.Y.-R. Deposit date: 2021-08-11 Release date: 2022-08-17 Last modified: 2024-02-28 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Multimodal tubulin binding by the yeast kinesin-8, Kip3, underlies its motility and depolymerization Biorxiv, 2024
7RS5	Cryo-EM structure of Kip3 (AMPPNP) bound to Taxol-Stabilized Microtubules Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Hernandez-Lopez, R.A, Leschziner, A.E, Arellano-Santoyo, H, Pellman, D, Stokasimov, E, Wang, R.Y.-R. Deposit date: 2021-08-10 Release date: 2022-08-17 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Multimodal tubulin binding by the yeast kinesin-8, Kip3, underlies its motility and depolymerization Biorxiv, 2021
1YFV	STRUCTURE OF (5'-R(GP*GP*CP*GP*AP*GP*CP*C)-3')2 BY 2-D NMR, 1 STRUCTURE Descriptor: RNA (5'-R(GP*GP*CP*GP*AP*GP*CP*C)-3') Authors: Santalucia Junior, J, Turner, D.H. Deposit date: 1997-05-17 Release date: 1997-10-15 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structure of (rGGCGAGCC)2 in solution from NMR and restrained molecular dynamics. Biochemistry, 32, 1993
2IJD	Crystal Structure of the Poliovirus Precursor Protein 3CD Descriptor: Picornain 3C, RNA-directed RNA polymerase, SULFATE ION, ... Authors: Marcotte, L.L, Gohara, D.W, Filman, D.J, Hogle, J.M. Deposit date: 2006-09-29 Release date: 2007-02-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (3.4 Å) Cite: Crystal structure of poliovirus 3CD: virally-encoded protease and precursor to the RNA-dependent RNA polymerase. J.Virol., 81, 2007
1CWP	STRUCTURES OF THE NATIVE AND SWOLLEN FORMS OF COWPEA CHLOROTIC MOTTLE VIRUS DETERMINED BY X-RAY CRYSTALLOGRAPHY AND CRYO-ELECTRON MICROSCOPY Descriptor: Coat protein, RNA (5'-R(*AP*U)-3'), RNA (5'-R(*AP*UP*AP*U)-3') Authors: Speir, J.A, Johnson, J.E, Munshi, S, Wang, G, Timothy, S, Baker, T.S. Deposit date: 1995-05-22 Release date: 1995-05-22 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Structures of the native and swollen forms of cowpea chlorotic mottle virus determined by X-ray crystallography and cryo-electron microscopy. Structure, 3, 1995

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