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1PJE
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BU of 1pje by Molmil
Structure of the channel-forming trans-membrane domain of Virus protein "u"(Vpu) from HIV-1
Descriptor: VPU protein
Authors:Park, S.H, Mrse, A.A, Nevzorov, A.A, Mesleh, M.F, Oblatt-Montal, M, Montal, M, Opella, S.J.
Deposit date:2003-06-02
Release date:2003-10-14
Last modified:2024-05-22
Method:SOLID-STATE NMR
Cite:Three-dimensional structure of the channel-forming trans-membrane domain of Virus protein "u" (Vpu) from HIV-1
J.Mol.Biol., 333, 2003
2I3V
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BU of 2i3v by Molmil
Measurement of conformational changes accompanying desensitization in an ionotropic glutamate receptor: Structure of G725C mutant
Descriptor: GLUTAMIC ACID, Glutamate receptor 2, ZINC ION
Authors:Armstrong, N, Jasti, J, Beich-Frandsen, M, Gouaux, E.
Deposit date:2006-08-21
Release date:2006-10-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Measurement of Conformational Changes accompanying Desensitization in an Ionotropic Glutamate Receptor.
Cell(Cambridge,Mass.), 127, 2006
3W5E
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BU of 3w5e by Molmil
Crystal structure of phosphodiesterase 4B in complex with compound 31e
Descriptor: CALCIUM ION, N-tert-butyl-2-{4-[(5,5-dioxido-2-phenyl-7,8-dihydro-6H-thiopyrano[3,2-d]pyrimidin-4-yl)amino]phenyl}acetamide, ZINC ION, ...
Authors:Takahashi, M, Hanzawa, H.
Deposit date:2013-01-28
Release date:2013-05-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Identification of the fused bicyclic 4-amino-2-phenylpyrimidine derivatives as novel and potent PDE4 inhibitors
Bioorg.Med.Chem.Lett., 23, 2013
1F9H
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BU of 1f9h by Molmil
CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF E. COLI HPPK(R92A) WITH MGAMPCPP AND 6-HYDROXYMETHYL-7,8-DIHYDROPTERIN AT 1.50 ANGSTROM RESOLUTION
Descriptor: 2-AMINO-6-HYDROXYMETHYL-7,8-DIHYDRO-3H-PTERIDIN-4-ONE, 6-HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE, CHLORIDE ION, ...
Authors:Blaszczyk, J, Ji, X.
Deposit date:2000-07-10
Release date:2003-04-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Dynamic Roles of Arginine Residues 82 and 92 of Escherichia coli 6-Hydroxymethyl-7,8-dihydropterin Pyrophosphokinase: Crystallographic Studies
Biochemistry, 42, 2003
2E1Z
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BU of 2e1z by Molmil
Crystal structure of Salmonella typhimurium propionate kinase (TdcD) in complex with diadenosine tetraphosphate (Ap4A) obtained after co-crystallization with ATP
Descriptor: 1,2-ETHANEDIOL, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Propionate Kinase
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
Deposit date:2006-11-04
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structures of Salmonella typhimurium propionate kinase and its complex with Ap4A: evidence for a novel Ap4A synthetic activity.
Proteins, 70, 2008
7M0Q
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BU of 7m0q by Molmil
Crystal structure of deep network hallucinated protein 0738_mod
Descriptor: Network hallucinated protein 0738_mod
Authors:Pellock, S.J, Bera, A.K, Anishchenko, I, Baker, D.
Deposit date:2021-03-11
Release date:2021-12-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:De novo protein design by deep network hallucination.
Nature, 600, 2021
6JIC
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BU of 6jic by Molmil
Identification and Characterization of a carboxypeptidase inhibitor from Lycium barbarum
Descriptor: WCI
Authors:Tan, W.L, Wong, K.H, Huang, J.Y, Tay, S.V, Wang, S.J.
Deposit date:2019-02-20
Release date:2020-02-26
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Identification and characterization of a wolfberry carboxypeptidase inhibitor from Lycium barbarum.
Food Chem, 351, 2021
3D3P
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BU of 3d3p by Molmil
Crystal structure of PDE4B catalytic domain in complex with a pyrazolopyridine inhibitor
Descriptor: 1-ethyl-N-(phenylmethyl)-4-(tetrahydro-2H-pyran-4-ylamino)-1H-pyrazolo[3,4-b]pyridine-5-carboxamide, ARSENIC, MAGNESIUM ION, ...
Authors:Somers, D.O, Neu, M.
Deposit date:2008-05-12
Release date:2009-05-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Pyrazolopyridines as a novel structural class of potent and selective PDE4 inhibitors.
Bioorg.Med.Chem.Lett., 18, 2008
2E20
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BU of 2e20 by Molmil
Crystal structure of Salmonella typhimurium propionate kinase (TdcD) in complex with diadenosine tetraphosphate (Ap4A)
Descriptor: 1,2-ETHANEDIOL, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Propionate Kinase
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
Deposit date:2006-11-04
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of Salmonella typhimurium propionate kinase and its complex with Ap4A: evidence for a novel Ap4A synthetic activity.
Proteins, 70, 2008
2E1Y
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BU of 2e1y by Molmil
Crystal structure of propionate kinase (TdcD) from Salmonella typhimurium
Descriptor: Propionate kinase
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
Deposit date:2006-11-04
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of Salmonella typhimurium propionate kinase and its complex with Ap4A: evidence for a novel Ap4A synthetic activity.
Proteins, 70, 2008
6MK5
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BU of 6mk5 by Molmil
Solution NMR structure of spider toxin analogue [F5A,M6F,T26L,K28R]GpTx-1
Descriptor: Toxin GTx1-15
Authors:Schroeder, C.I.
Deposit date:2018-09-25
Release date:2018-12-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Peptide-Membrane Interactions Affect the Inhibitory Potency and Selectivity of Spider Toxins ProTx-II and GpTx-1.
ACS Chem. Biol., 14, 2019
6MZT
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BU of 6mzt by Molmil
Solution structure of alpha-KTx-6.21 (UroTx) from Urodacus yaschenkoi
Descriptor: Potassium channel toxin alpha-KTx 6.21
Authors:Chin, Y.K.-Y, Luna-Ramirez, K, Anangi, R, King, G.F.
Deposit date:2018-11-05
Release date:2020-03-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis of the potency and selectivity of Urotoxin, a potent Kv1 blocker from scorpion venom.
Biochem. Pharmacol., 174, 2020
8G5H
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BU of 8g5h by Molmil
Native GABA-A receptor from the mouse brain, ortho-alpha1-alpha3-beta2-gamma2 subtype, in complex with GABA, Zolpidem, and endogenous neurosteroid
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GAMMA-AMINO-BUTANOIC ACID, Gamma-aminobutyric acid receptor subunit alpha-1, ...
Authors:Sun, C, Gouaux, E.
Deposit date:2023-02-13
Release date:2023-09-20
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Cryo-EM structures reveal native GABA A receptor assemblies and pharmacology.
Nature, 622, 2023
4MUW
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BU of 4muw by Molmil
Crystal Structure of PDE10A with Novel Keto-Benzimidazole Inhibitor
Descriptor: 2-{4-[(6,7-difluoro-1H-benzimidazol-2-yl)amino]phenoxy}-N-methyl-3,4'-bipyridin-2'-amine, GLYCEROL, SULFATE ION, ...
Authors:Chmait, S, Jordan, S.
Deposit date:2013-09-23
Release date:2013-10-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.639 Å)
Cite:Design, Optimization, and Biological Evaluation of Novel Keto-Benzimidazoles as Potent and Selective Inhibitors of Phosphodiesterase 10A (PDE10A).
J.Med.Chem., 56, 2013
1Q3E
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BU of 1q3e by Molmil
HCN2J 443-645 in the presence of cGMP
Descriptor: CYCLIC GUANOSINE MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
Authors:Zagotta, W.N, Olivier, N.B, Black, K.D, Young, E.C, Olson, R, Gouaux, J.E.
Deposit date:2003-07-29
Release date:2003-09-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for modulation and agonist specificity of HCN pacemaker channels
Nature, 425, 2003
8G2U
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BU of 8g2u by Molmil
Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Bhattacharjee, S, Brown, P.Z, Frank, J.
Deposit date:2023-02-06
Release date:2023-12-06
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Time resolution in cryo-EM using a PDMS-based microfluidic chip assembly and its application to the study of HflX-mediated ribosome recycling.
Cell, 187, 2024
8G34
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BU of 8g34 by Molmil
Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate
Descriptor: 16S, 23S, 30S ribosomal protein S10, ...
Authors:Bhattacharjee, S, Brown, P.Z, Frank, J.
Deposit date:2023-02-06
Release date:2023-12-06
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Time resolution in cryo-EM using a PDMS-based microfluidic chip assembly and its application to the study of HflX-mediated ribosome recycling.
Cell, 187, 2024
8G31
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BU of 8g31 by Molmil
Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
Descriptor: 16S, 23S, 30S ribosomal protein S10, ...
Authors:Bhattacharjee, S, Brown, P.Z, Frank, J.
Deposit date:2023-02-06
Release date:2023-12-06
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Time resolution in cryo-EM using a PDMS-based microfluidic chip assembly and its application to the study of HflX-mediated ribosome recycling.
Cell, 187, 2024
6O3S
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BU of 6o3s by Molmil
NMR solution structure of Luffin P1
Descriptor: Ribosome-inactivating protein luffin P1
Authors:Rosengren, K.J, Payne, C.
Deposit date:2019-02-27
Release date:2019-04-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:An Ancient Peptide Family Buried within Vicilin Precursors.
Acs Chem.Biol., 14, 2019
6O3Q
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BU of 6o3q by Molmil
NMR solution structure of vicilin-buried peptide-8 (VBP-8)
Descriptor: Vicilin
Authors:Rosengren, K.J, Payne, C.
Deposit date:2019-02-27
Release date:2019-04-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:An Ancient Peptide Family Buried within Vicilin Precursors.
Acs Chem.Biol., 14, 2019
2JM4
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BU of 2jm4 by Molmil
The solution NMR structure of the relaxin (RXFP1) receptor LDLa module.
Descriptor: CALCIUM ION, Relaxin receptor 1
Authors:Hopkins, E.J, Bathgate, R.A.D, Gooley, P.R.
Deposit date:2006-10-09
Release date:2006-12-12
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:The NMR solution structure of the relaxin (RXFP1) receptor lipoprotein receptor class A module and identification of key residues in the N-terminal region of the module that mediate receptor activation
J.Biol.Chem., 282, 2007
6GNZ
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BU of 6gnz by Molmil
Plantaricin S-a in 100 mM DPC micelles. This is the alpha part of the bacteriocin plantaricin S.
Descriptor: Plantaricin S alpha protein
Authors:Ekblad, B, Kristiansen, P.E.
Deposit date:2018-06-01
Release date:2019-03-06
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:NMR structures and mutational analysis of the two peptides constituting the bacteriocin plantaricin S.
Sci Rep, 9, 2019
4A3F
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BU of 4a3f by Molmil
RNA Polymerase II initial transcribing complex with a 6nt DNA-RNA hybrid and soaked with AMPCPP
Descriptor: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*DTP *TP*TP*CP*C BRU*GP*GP*TP*CP*AP*TP*T)-3', DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, ...
Authors:Cheung, A.C.M, Sainsbury, S, Cramer, P.
Deposit date:2011-09-30
Release date:2011-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural basis of initial RNA polymerase II transcription.
EMBO J., 30, 2011
5WXN
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BU of 5wxn by Molmil
Structure of the LKB1 and 14-3-3 complex
Descriptor: 14-3-3 protein zeta/delta, Serine/threonine-protein kinase STK11
Authors:Ding, S, Shi, Z.B.
Deposit date:2017-01-08
Release date:2017-04-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Structure of the complex of phosphorylated liver kinase B1 and 14-3-3 zeta
Acta Crystallogr F Struct Biol Commun, 73, 2017
5WYO
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BU of 5wyo by Molmil
Solution structure of E.coli HdeA
Descriptor: Acid stress chaperone HdeA
Authors:Yang, C, Hu, Y, Jin, C.
Deposit date:2017-01-14
Release date:2017-11-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Characterizations of the Interactions between Escherichia coli Periplasmic Chaperone HdeA and Its Native Substrates during Acid Stress
Biochemistry, 56, 2017

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