PDB: 166 resultsInfo pagesStatus searchChemie searchBIRD

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7T30	Structure of electron bifurcating Ni-Fe hydrogenase complex HydABCSL in FMN/NAD(H) bound state Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ... Authors: Feng, X, Li, H. Deposit date: 2021-12-06 Release date: 2022-03-16 Method: ELECTRON MICROSCOPY (3 Å) Cite: Structure and electron transfer pathways of an electron-bifurcating NiFe-hydrogenase. Sci Adv, 8, 2022
7ZC5	Complex I from E. coli, DDM/LMNG-purified, under Turnover at pH 8, Resting state Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CALCIUM ION, ... Authors: Kravchuk, V, Kampjut, D, Sazanov, L. Deposit date: 2022-03-25 Release date: 2022-09-21 Last modified: 2022-10-05 Method: ELECTRON MICROSCOPY (3 Å) Cite: A universal coupling mechanism of respiratory complex I. Nature, 609, 2022
7A1G	Structure of a crosslinked yeast ABCE1-bound 43S pre-initiation complex Descriptor: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ... Authors: Mackens-Kiani, T, Kratzat, H, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R. Deposit date: 2020-08-13 Release date: 2020-10-14 Last modified: 2023-11-29 Method: ELECTRON MICROSCOPY (3 Å) Cite: A structural inventory of native ribosomal ABCE1-43S pre-initiation complexes. Embo J., 40, 2021
8CAH	Cryo-EM structure of native Otu2-bound ubiquitinated 43S pre-initiation complex Descriptor: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ... Authors: Ikeuchi, K, Buschauer, R, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R. Deposit date: 2023-01-24 Release date: 2023-05-24 Method: ELECTRON MICROSCOPY (3 Å) Cite: Molecular basis for recognition and deubiquitination of 40S ribosomes by Otu2. Nat Commun, 14, 2023
6YAL	Mammalian 48S late-stage initiation complex with beta-globin mRNA Descriptor: 18S ribosomal RNA, 40S Ribosomal protein uS3, 40S Ribosomal protein uS7, ... Authors: Bochler, A, Simonetti, A, Guca, E, Hashem, Y. Deposit date: 2020-03-12 Release date: 2020-04-08 Last modified: 2020-04-22 Method: ELECTRON MICROSCOPY (3 Å) Cite: Structural Insights into the Mammalian Late-Stage Initiation Complexes. Cell Rep, 31, 2020
7P69	Complex I from E. coli, DDM/LMNG-purified, under Turnover at pH 6, Resting state Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CALCIUM ION, ... Authors: Kravchuk, V, Kampjut, D, Sazanov, L. Deposit date: 2021-07-15 Release date: 2022-09-21 Last modified: 2022-10-05 Method: ELECTRON MICROSCOPY (3 Å) Cite: A universal coupling mechanism of respiratory complex I. Nature, 609, 2022
7P7L	Complex I from E. coli, DDM/LMNG-purified, with NADH and FMN, Open state Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, EICOSANE, ... Authors: Kravchuk, V, Kampjut, D, Sazanov, L. Deposit date: 2021-07-19 Release date: 2022-09-21 Last modified: 2022-10-05 Method: ELECTRON MICROSCOPY (3 Å) Cite: A universal coupling mechanism of respiratory complex I. Nature, 609, 2022
8OH5	Cryo-EM structure of the electron bifurcating transhydrogenase StnABC complex from Sporomusa Ovata (state 2) Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, ... Authors: Kumar, A, Kremp, F, Mueller, V, Schuller, J.M. Deposit date: 2023-03-20 Release date: 2023-09-13 Last modified: 2023-09-20 Method: ELECTRON MICROSCOPY (3 Å) Cite: Molecular architecture and electron transfer pathway of the Stn family transhydrogenase. Nat Commun, 14, 2023
6ZME	SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complex Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Thoms, M, Buschauer, R, Ameismeier, M, Denk, T, Kratzat, H, Mackens-Kiani, T, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R. Deposit date: 2020-07-02 Release date: 2020-08-12 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3 Å) Cite: Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2. Science, 369, 2020
2PDA	CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN PYRUVATE-FERREDOXIN OXIDOREDUCTASE FROM DESULFOVIBRIO AFRICANUS AND PYRUVATE. Descriptor: CALCIUM ION, IRON/SULFUR CLUSTER, MAGNESIUM ION, ... Authors: Chabriere, E, Charon, M.H. Deposit date: 1998-11-10 Release date: 1999-04-23 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (3 Å) Cite: Crystal structures of the key anaerobic enzyme pyruvate:ferredoxin oxidoreductase, free and in complex with pyruvate. Nat.Struct.Biol., 6, 1999
8P03	48S late-stage initiation complex with m6A mRNA Descriptor: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ... Authors: Guca, E, Lima, L.H.F, Boissier, F, Hashem, Y. Deposit date: 2023-05-09 Release date: 2024-03-20 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.04 Å) Cite: N 6 -methyladenosine in 5' UTR does not promote translation initiation. Mol.Cell, 84, 2024
7Z7T	Complex I from E. coli, LMNG-purified, under Turnover at pH 6, Open state Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CALCIUM ION, ... Authors: Kravchuk, V, Kampjut, D, Sazanov, L. Deposit date: 2022-03-16 Release date: 2022-09-21 Last modified: 2022-10-05 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: A universal coupling mechanism of respiratory complex I. Nature, 609, 2022
7P7K	Complex I from E. coli, DDM/LMNG-purified, with DQ, Resting state Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, EICOSANE, ... Authors: Kravchuk, V, Kampjut, D, Sazanov, L. Deposit date: 2021-07-19 Release date: 2022-09-21 Last modified: 2022-10-05 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: A universal coupling mechanism of respiratory complex I. Nature, 609, 2022
3I9V	Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus, oxidized, 2 mol/ASU Descriptor: CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ... Authors: Sazanov, L.A, Berrisford, J.M. Deposit date: 2009-07-13 Release date: 2009-09-15 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structural basis for the mechanism of respiratory complex I J.Biol.Chem., 284, 2009
3IAM	Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus, reduced, 2 mol/ASU, with bound NADH Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, ... Authors: Sazanov, L.A, Berrisford, J.M. Deposit date: 2009-07-14 Release date: 2009-09-15 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structural basis for the mechanism of respiratory complex I J.Biol.Chem., 284, 2009
6Y11	Respiratory complex I from Thermus thermophilus Descriptor: DUF3197 domain-containing protein, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ... Authors: Gutierrez-Fernandez, J, Minhas, G.S, Sazanov, L.A. Deposit date: 2020-02-10 Release date: 2020-09-02 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (3.109 Å) Cite: Key role of quinone in the mechanism of respiratory complex I. Nat Commun, 11, 2020
3IAS	Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus, oxidized, 4 mol/ASU, re-refined to 3.15 angstrom resolution Descriptor: CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ... Authors: Sazanov, L.A, Berrisford, J.M. Deposit date: 2009-07-14 Release date: 2009-09-15 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3.15 Å) Cite: Structural basis for the mechanism of respiratory complex I J.Biol.Chem., 284, 2009
7T2R	Structure of electron bifurcating Ni-Fe hydrogenase complex HydABCSL in FMN-free apo state Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, ... Authors: Feng, X, Li, H. Deposit date: 2021-12-06 Release date: 2022-03-16 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structure and electron transfer pathways of an electron-bifurcating NiFe-hydrogenase. Sci Adv, 8, 2022
7P61	Complex I from E. coli, DDM-purified, with NADH, Resting state Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CALCIUM ION, ... Authors: Kravchuk, V, Kampjut, D, Sazanov, L. Deposit date: 2021-07-15 Release date: 2022-09-21 Last modified: 2022-10-05 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: A universal coupling mechanism of respiratory complex I. Nature, 609, 2022
7P7M	Complex I from E. coli, DDM/LMNG-purified, inhibited by Piericidin A, Open state Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, EICOSANE, ... Authors: Kravchuk, V, Kampjut, D, Sazanov, L. Deposit date: 2021-07-19 Release date: 2022-09-21 Last modified: 2022-10-05 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: A universal coupling mechanism of respiratory complex I. Nature, 609, 2022
8OH9	Cryo-EM structure of the electron bifurcating transhydrogenase StnABC complex from Sporomusa Ovata (state 1) Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Formate dehydrogenase-O, ... Authors: Kumar, A, Kremp, F, Mueller, V, Schuller, J.M. Deposit date: 2023-03-20 Release date: 2023-09-13 Last modified: 2023-09-20 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Molecular architecture and electron transfer pathway of the Stn family transhydrogenase. Nat Commun, 14, 2023
6I1P	Respiratory complex I from Thermus thermophilus with bound NADH Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ... Authors: Gutierrez-Fernandez, J, Minhas, G.S, Sazanov, L.A. Deposit date: 2018-10-29 Release date: 2020-09-02 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (3.207 Å) Cite: Key role of quinone in the mechanism of respiratory complex I. Nat Commun, 11, 2020
2FUG	Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ... Authors: Sazanov, L.A, Hinchliffe, P. Deposit date: 2006-01-26 Release date: 2006-02-14 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus. Science, 311, 2006
8CAS	Cryo-EM structure of native Otu2-bound ubiquitinated 48S initiation complex (partial) Descriptor: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ... Authors: Ikeuchi, K, Buschauer, R, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R. Deposit date: 2023-01-24 Release date: 2023-05-24 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Molecular basis for recognition and deubiquitination of 40S ribosomes by Otu2. Nat Commun, 14, 2023
8P09	48S late-stage initiation complex with non methylated mRNA Descriptor: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ... Authors: Guca, E, Lima, L.H.F, Boissier, F, Hashem, Y. Deposit date: 2023-05-09 Release date: 2024-03-20 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: N 6 -methyladenosine in 5' UTR does not promote translation initiation. Mol.Cell, 84, 2024

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