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4PMS
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BU of 4pms by Molmil
The structure of TrkA kinase bound to the inhibitor 4-naphthalen-1-yl-1-[(5-phenyl-1,2,4-oxadiazol-3-yl)methyl]-1H-pyrrolo[3,2-c]pyridine-2-carboxylic acid
Descriptor: 4-(naphthalen-1-yl)-1-[(5-phenyl-1,2,4-oxadiazol-3-yl)methyl]-1H-pyrrolo[3,2-c]pyridine-2-carboxylic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Su, H.P.
Deposit date:2014-05-22
Release date:2014-06-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Maximizing diversity from a kinase screen: identification of novel and selective pan-Trk inhibitors for chronic pain.
J.Med.Chem., 57, 2014
7SVQ
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BU of 7svq by Molmil
Crystal Structure of L-galactose dehydrogenase from Spinacia oleracea in complex with NAD+
Descriptor: L-galactose dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Santillan, J.A.V, Cabrejos, D.A.L, Pereira, H.M, Gomez, J.C.C, Garratt, R.C.
Deposit date:2021-11-19
Release date:2022-07-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Characterization of L-Galactose Dehydrogenase: An Essential Enzyme for Vitamin C Biosynthesis.
Plant Cell.Physiol., 63, 2022
5AGF
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BU of 5agf by Molmil
Nitrosyl complex of the D121Q variant of cytochrome c prime from Alcaligenes xylosoxidans
Descriptor: CYTOCHROME C PRIME, HEME C, NITRIC OXIDE, ...
Authors:Gahfoor, D.D, Kekilli, D, Abdullah, G.H, Dworkowski, F.S.N, Hassan, H.G, Wilson, M.T, Hough, M.A, Strange, R.W.
Deposit date:2015-01-30
Release date:2015-09-09
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Hydrogen Bonding of the Dissociated Histidine Ligand is not Required for Formation of a Proximal No Adduct in Cytochrome C'.
J.Biol.Inorg.Chem., 20, 2015
3CSO
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BU of 3cso by Molmil
HCV Polymerase in complex with a 1,5 Benzodiazepine inhibitor
Descriptor: (11S)-10-acetyl-11-[4-(benzyloxy)-3-chlorophenyl]-3,3-dimethyl-2,3,4,5,10,11-hexahydro-1H-dibenzo[b,e][1,4]diazepin-1-one, RNA-directed RNA polymerase
Authors:Nyanguile, O.
Deposit date:2008-04-10
Release date:2009-04-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:1,5-benzodiazepines, a novel class of hepatitis C virus polymerase nonnucleoside inhibitors.
Antimicrob.Agents Chemother., 52, 2008
5IO9
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BU of 5io9 by Molmil
X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN
Descriptor: Neuronal migration protein doublecortin
Authors:Ruf, A, Benz, J, Burger, D, D'Arcy, B, Debulpaep, M, Di Lello, P, Fry, D, Huber, W, Kremer, T, Laeremans, T, Matile, H, Ross, A, Rudolph, M.G, Rufer, A.C, Sharma, A, Steinmetz, M.O, Steyaert, J, Schoch, G, Stihle, M, Thoma, R.
Deposit date:2016-03-08
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structures of the Human Doublecortin C- and N-terminal Domains in Complex with Specific Antibodies.
J.Biol.Chem., 291, 2016
5AFE
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BU of 5afe by Molmil
Medium Resolution structure of the C-terminal family 65 Carbohydrate Binding Module (CBM65B) of endoglucanase Cel5A from Eubacterium cellulosolvens with a bound xyloglucan heptasaccharide (XXXG)
Descriptor: CITRIC ACID, ENDOGLUCANASE CEL5A, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Venditto, I, Fontes, C.M.G.A, Gilbert, H.J, Najmudin, S.
Deposit date:2015-01-21
Release date:2015-02-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Understanding How Noncatalytic Carbohydrate Binding Modules Can Display Specificity for Xyloglucan
To be Published
7TAN
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BU of 7tan by Molmil
Structure of VRK1 C-terminal tail bound to nucleosome core particle
Descriptor: Histone H2A type 1, Histone H2B type 1-C/E/F/G/I, Histone H3.2, ...
Authors:Spangler, C.J, Budziszewski, G.R, McGinty, R.K.
Deposit date:2021-12-21
Release date:2022-05-04
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Multivalent DNA and nucleosome acidic patch interactions specify VRK1 mitotic localization and activity.
Nucleic Acids Res., 50, 2022
4WIW
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BU of 4wiw by Molmil
Crystal structure of C-terminal domain of putative chitinase from Desulfitobacterium hafniense DCB-2
Descriptor: CALCIUM ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Chang, C, Tesar, C, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-26
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.637 Å)
Cite:Crystal structure of C-terminal domain of putative chitinase from Desulfitobacterium hafniense DCB-2
To Be Published
7SYG
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BU of 7syg by Molmil
Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 1(delta dII)
Descriptor: 18S rRNA, 40S ribosomal protein S2, 40S ribosomal protein S24, ...
Authors:Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J.
Deposit date:2021-11-25
Release date:2022-07-13
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Molecular architecture of 40S initiation complexes on the Hepatitis C virus IRES: from ribosomal attachment to eIF5B-mediated reorientation of initiator tRNA
To Be Published
7SMI
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BU of 7smi by Molmil
Crystal Structure of L-galactose dehydrogenase from Spinacia oleracea
Descriptor: L-galactose dehydrogenase
Authors:Santillan, J.A.V, Cabrejos, D.A.L, Pereira, H.M, Gomez, J.C.C, Garratt, R.C.
Deposit date:2021-10-26
Release date:2022-07-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Characterization of L-Galactose Dehydrogenase: An Essential Enzyme for Vitamin C Biosynthesis.
Plant Cell.Physiol., 63, 2022
7SYH
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BU of 7syh by Molmil
Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 2(delta dII)
Descriptor: 18S rRNA, 40S ribosomal protein S21, 40S ribosomal protein S24, ...
Authors:Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J.
Deposit date:2021-11-25
Release date:2022-07-13
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Molecular architecture of 40S initiation complexes on the Hepatitis C virus IRES: from ribosomal attachment to eIF5B-mediated reorientation of initiator tRNA
To Be Published
4ZV3
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BU of 4zv3 by Molmil
Crystal structure of the N- and C-terminal domains of mouse acyl-CoA thioesterase 7
Descriptor: COENZYME A, Cytosolic acyl coenzyme A thioester hydrolase
Authors:Swarbrick, C.M.D, Forwood, J.K.
Deposit date:2015-05-18
Release date:2015-06-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the N- and C-terminal domains of mouse acyl-CoA thioesterase 7
To Be Published
7B21
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BU of 7b21 by Molmil
The X183 domain from Cellvibrio japonicus Cbp2D
Descriptor: 1,2-ETHANEDIOL, Carbohydrate binding protein, putative, ...
Authors:Branch, J, Hemsworth, G.R.
Deposit date:2020-11-25
Release date:2021-07-21
Last modified:2021-09-29
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:C-type cytochrome-initiated reduction of bacterial lytic polysaccharide monooxygenases.
Biochem.J., 478, 2021
5HTI
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BU of 5hti by Molmil
Crystal structure of c-Met kinase domain in complex with LXM108
Descriptor: Hepatocyte growth factor receptor, N-[3-fluoro-4-({7-[2-(morpholin-4-yl)ethoxy]-1,6-naphthyridin-4-yl}oxy)phenyl]-N'-(4-fluorophenyl)cyclopropane-1,1-dicarboxamide
Authors:Liu, Q.F, Xu, Y.C.
Deposit date:2016-01-26
Release date:2017-02-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Crystal structure of c-Met kinase domain in complex with LXM108
to be published
4WD1
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BU of 4wd1 by Molmil
Acetoacetyl-CoA Synthetase from Streptomyces lividans
Descriptor: 1,2-ETHANEDIOL, Acetoacetate-CoA ligase, CALCIUM ION
Authors:Gulick, A.M, Mitchell, C.A.
Deposit date:2014-09-05
Release date:2015-01-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:The structure of S. lividans acetoacetyl-CoA synthetase shows a novel interaction between the C-terminal extension and the N-terminal domain.
Proteins, 83, 2015
7ST8
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BU of 7st8 by Molmil
Crystal structure of 7H2.2 Fab in complex with SAS1B C-terminal region
Descriptor: 7H2.2 Fab Heavy Chain, 7H2.2 Fab Light Chain, Astacin-like metalloendopeptidase
Authors:Legg, M.S.G, Evans, S.V.
Deposit date:2021-11-12
Release date:2022-05-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Monoclonal antibody 7H2.2 binds the C-terminus of the cancer-oocyte antigen SAS1B through the hydrophilic face of a conserved amphipathic helix corresponding to one of only two regions predicted to be ordered
Acta Crystallogr.,Sect.D, 78, 2022
4V3E
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BU of 4v3e by Molmil
The CIDRa domain from IT4var07 PfEMP1 bound to endothelial protein C receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ENDOTHELIAL PROTEIN C RECEPTOR, ...
Authors:Lau, C.K.Y, Turner, L, Jespersen, J.S, Lowe, E.D, Petersen, B, Wang, C.W, Petersen, J.E.V, Lusingu, J, Theander, T.G, Lavstsen, T, Higgins, M.K.
Deposit date:2014-10-17
Release date:2014-12-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Conservation Despite Huge Sequence Diversity Allows Epcr Binding by the Pfemp1 Family Implicated in Severe Childhood Malaria.
Cell Host Microbe., 17, 2015
3UU9
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BU of 3uu9 by Molmil
Structure of the free TvNiRb form of Thioalkalivibrio nitratireducens cytochrome c nitrite reductase
Descriptor: CALCIUM ION, Eight-heme nitrite reductase, HEME C, ...
Authors:Trofimov, A.A, Polyakov, K.M, Tikhonova, T.V, Tikhonov, A.V, Dorovatovskii, P.V, Popov, V.O.
Deposit date:2011-11-28
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Covalent modifications of the catalytic tyrosine in octahaem cytochrome c nitrite reductase and their effect on the enzyme activity.
Acta Crystallogr.,Sect.D, 68, 2012
4FZJ
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BU of 4fzj by Molmil
Pantothenate synthetase in complex with 1,3-DIMETHYL-1H-THIENO[2,3-C]PYRAZOLE-5-CARBOXYLIC ACID
Descriptor: 1,2-ETHANEDIOL, 1,3-dimethyl-1H-thieno[2,3-c]pyrazole-5-carboxylic acid, ETHANOL, ...
Authors:Silvestre, H.L, Blundell, T.L, Abell, C, Ciulli, A.
Deposit date:2012-07-06
Release date:2013-06-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Integrated biophysical approach to fragment screening and validation for fragment-based lead discovery.
Proc.Natl.Acad.Sci.USA, 110, 2013
3VDM
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BU of 3vdm by Molmil
Crystal Structure of VldE, the pseudo-glycosyltransferase which catalyzes non-glycosidic C-N coupling in Validamycin A biosynthesis
Descriptor: VldE
Authors:Cavalier, M.C, Yim, Y.-S, Asamizu, S, Neau, D, Mahmud, T, Lee, Y.-H.
Deposit date:2012-01-05
Release date:2013-01-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal Structure of VldE, the pseudo-glycosyltransferase which catalyzes non-glycosidic C-N coupling in Validamycin A biosynthesis
To be Published
4UIX
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BU of 4uix by Molmil
N-TERMINAL BROMODOMAIN OF HUMAN BRD4 WITH 7-(3,4-dimethoxyphenyl)-N-(1,1-dioxo-1-thian-4-yl)-5-methyl-4-oxo-4H,5H-thieno-3,2-c-pyridine-2- carboxamide
Descriptor: 1,2-ETHANEDIOL, BROMODOMAIN-CONTAINING PROTEIN 4, CALCIUM ION, ...
Authors:Chung, C, Theodoulou, N.T, Bamborough, P, Humphreys, P.G.
Deposit date:2015-04-03
Release date:2015-04-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The Discovery of I-Brd9, a Selective Cell Active Chemical Probe for Bromodomain Containing Protein 9 Inhibition.
J.Med.Chem., 59, 2016
4WHI
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BU of 4whi by Molmil
Crystal structure of C-terminal domain of penicillin binding protein Rv0907
Descriptor: BROMIDE ION, Beta-lactamase, NICKEL (II) ION
Authors:Chang, C, Hatzos-Skintges, C, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-22
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of C-terminal domain of penicillin binding protein Rv0907
To Be Published
7SAG
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BU of 7sag by Molmil
Solution NMR structure of barrettide C
Descriptor: Barrettide C
Authors:Payne, C.D, Rosengren, K.J.
Deposit date:2021-09-22
Release date:2022-01-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Barrettides: A Peptide Family Specifically Produced by the Deep-Sea Sponge Geodia barretti .
J.Nat.Prod., 84, 2021
4UIW
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BU of 4uiw by Molmil
BROMODOMAIN OF HUMAN BRD9 WITH N-(1,1-dioxo-1-thian-4-yl)-5-ethyl-4- oxo-7-3-(trifluoromethyl)phenyl-4H,5H-thieno-3,2-c-pyridine-2- carboximidamide
Descriptor: 1,2-ETHANEDIOL, BROMODOMAIN-CONTAINING PROTEIN 9, N'-[1,1-bis(oxidanylidene)thian-4-yl]-5-ethyl-4-oxidanylidene-7-[3-(trifluoromethyl)phenyl]thieno[3,2-c]pyridine-2-carboximidamide
Authors:Chung, C, Theodoulou, N.T, Bamborough, P, Humphreys, P.G.
Deposit date:2015-04-03
Release date:2015-04-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:The Discovery of I-Brd9, a Selective Cell Active Chemical Probe for Bromodomain Containing Protein 9 Inhibition.
J.Med.Chem., 59, 2016
4UIZ
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BU of 4uiz by Molmil
N-TERMINAL BROMODOMAIN OF HUMAN BRD4 WITH 7-(3,4-dimethoxyphenyl)-2-(4-methanesulfonylpiperazine-1-carbonyl)-5-methyl-4H,5H-thieno-3,2-c- pyridin-4-one
Descriptor: 1,2-ETHANEDIOL, 7-(3,4-dimethoxyphenyl)-5-methyl-2-(4-methylsulfonylpiperazin-1-yl)carbonyl-thieno[3,2-c]pyridin-4-one, BROMODOMAIN-CONTAINING PROTEIN 4
Authors:Chung, C, Theodoulou, N.T, Bamborough, P, Humphreys, P.G.
Deposit date:2015-04-03
Release date:2015-04-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:The Discovery of I-Brd9, a Selective Cell Active Chemical Probe for Bromodomain Containing Protein 9 Inhibition.
J.Med.Chem., 59, 2016

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