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9C2C
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BU of 9c2c by Molmil
Cryo-EM structure of the human P2X1 receptor in the NF449-bound inhibited state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4,4',4'',4'''-{carbonylbis[azanediylbenzene-5,1,3-triylbis(carbonylazanediyl)]}tetra(benzene-1,3-disulfonic acid), P2X purinoceptor 1
Authors:Oken, A.C, Lisi, N.E, Ditter, I.A, Shi, H, Mansoor, S.E.
Deposit date:2024-05-30
Release date:2024-10-09
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structures of the human P2X1 receptor reveal subtype-specific architecture and antagonism by supramolecular ligand-binding.
Nat Commun, 15, 2024
5IOF
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BU of 5iof by Molmil
Structure of the transmembrane domain of the transporter SLC26Dg
Descriptor: Sulphate transporter
Authors:Dutzler, R, Geertsma, E.R.G, Shaik, F.R.
Deposit date:2016-03-08
Release date:2016-03-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Structure of a prokaryotic fumarate transporter reveals the architecture of the SLC26 family.
Nat. Struct. Mol. Biol., 22, 2015
9FWC
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BU of 9fwc by Molmil
Coxsackievirus B3 3C protease in C121 spacegroup
Descriptor: Genome polyprotein
Authors:Fairhead, M, Lithgo, R.M, MacLean, E.M, Bowesman-Jones, H, Aschenbrenner, J.C, Balcomb, B.H, Capkin, E, Chandran, A.V, Godoy, A.S, Marples, P.G, Fearon, D, von Delft, F, Koekemoer, L.
Deposit date:2024-06-28
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Coxsackievirus B3 3C protease in C121 spacegroup
To Be Published
9F3D
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BU of 9f3d by Molmil
Single acyclic phosphonate nucleotide (S)-ZNA modification on DNA hairpin
Descriptor: C modifed (S)-ZNA
Authors:Li, X, Groaz, E, Herdewijn, P, Lescrinier, E.
Deposit date:2024-04-25
Release date:2024-06-05
Last modified:2024-07-10
Method:SOLUTION NMR
Cite:Impact of Single Acyclic Phosphonate Nucleotide (ZNA) Modifications on DNA Duplex Stability.
Chemistry, 30, 2024
7STK
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BU of 7stk by Molmil
Full-length insulin receptor bound with unsaturated insulin WT (2 insulins bound) asymmetric conformation (Conformation 2)
Descriptor: Insulin, Insulin receptor
Authors:Bai, X.C, Choi, E.
Deposit date:2021-11-14
Release date:2022-03-30
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Synergistic activation of the insulin receptor via two distinct sites.
Nat.Struct.Mol.Biol., 29, 2022
9B9O
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BU of 9b9o by Molmil
Crystal structure of FlcD from Pseudomonas aeruginosa bond to iron(II) and substrate
Descriptor: (2R)-2-{[(2Z)-2-(hydroxyimino)ethyl]sulfanyl}butanedioic acid, FE (II) ION, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C
Authors:Walker, M.E, Grove, T.L, Li, B, Redinbo, M.R.
Deposit date:2024-04-02
Release date:2024-07-31
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structural Basis for Methine Excision by a Heme Oxygenase-like Enzyme.
Acs Cent.Sci., 10, 2024
9BJ1
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BU of 9bj1 by Molmil
Crystal structure of inhibitor GNE-6893 bound to HPK1
Descriptor: (4S,5R,7R,11aP)-10-{[(3R)-3-hydroxy-1-methyl-2-oxopyrrolidin-3-yl]ethynyl}-N~3~-methyl-6,7-dihydro-5H-5,7-methanoimidazo[2,1-a][2]benzazepine-2,3-dicarboxamide, (9S)-2-{[(6P)-8-amino-6-(5-amino-4-methylpyridin-3-yl)-7-fluoroisoquinolin-3-yl]amino}-6-methyl-5,6-dihydro-4H-pyrazolo[1,5-d][1,4]diazepin-7(8H)-one, 1,2-ETHANEDIOL, ...
Authors:Kiefer, J.R, Tellis, J.C, Chan, B.K, Wang, W, Wu, P, Choo, E.F, Heffron, T.P, Wei, B, Siu, M.
Deposit date:2024-04-24
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Discovery of GNE-6893, a Potent, Selective, Orally Bioavailable Small Molecule Inhibitor of HPK1.
Acs Med.Chem.Lett., 15, 2024
7STH
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BU of 7sth by Molmil
Full-length insulin receptor bound with unsaturated insulin WT (2 insulin bound) symmetric conformation
Descriptor: Insulin, Insulin receptor
Authors:Bai, X.C, Choi, E.
Deposit date:2021-11-13
Release date:2022-03-30
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Synergistic activation of the insulin receptor via two distinct sites.
Nat.Struct.Mol.Biol., 29, 2022
9G9S
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BU of 9g9s by Molmil
Crystal structure of PbdA bound to veratrate
Descriptor: 3,4-dimethoxybenzoic acid, Cytochrome P450 CYP199, GLYCEROL, ...
Authors:Hinchen, D.J, Wolf, M.E, Eltis, L.D, McGeehan, J.E.
Deposit date:2024-07-25
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Characterization of a cytochrome P450 that catalyzes the O-demethylation of lignin-derived benzoates.
J.Biol.Chem., 2024
9EUU
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BU of 9euu by Molmil
Structure of recombinant alpha-synuclein fibrils 1B capable of seeding GCIs in vivo
Descriptor: Alpha-synuclein
Authors:Burger, D, Kashyrina, M, Lewis, A, De Nuccio, F, Mohammed, I, de La Seigliere, H, van den Heuvel, L, Feuillie, C, Verchere, J, Berbon, M, Arotcarena, M, Retailleau, A, Bezard, E, Laferriere, F, Loquet, A, Bousset, L, Baron, T, Lofrumento, D.D, De Giorgi, F, Stahlberg, H, Ichas, F.
Deposit date:2024-03-28
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (1.93 Å)
Cite:Multiple System Atrophy: Insights from aSyn Fibril Structure
To Be Published
6GQW
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BU of 6gqw by Molmil
KRAS-169 Q61H GPPNHP + CH-1
Descriptor: GTPase KRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Cruz-Migoni, A, Quevedo, C.E, Carr, S.B, Phillips, S.E.V, Rabbitts, T.H.
Deposit date:2018-06-08
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-based development of new RAS-effector inhibitors from a combination of active and inactive RAS-binding compounds.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6QS1
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BU of 6qs1 by Molmil
Crystal structure of human Angiotensin-1 converting enzyme N-domain in complex with BPPb
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Cozier, G.E, Acharya, K.R.
Deposit date:2019-02-20
Release date:2019-05-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the C-domain-selective angiotensin-converting enzyme inhibition by bradykinin-potentiating peptide b (BPPb).
Biochem.J., 476, 2019
8VIW
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BU of 8viw by Molmil
Cryo-EM structure of heparosan synthase 2 from Pasteurella multocida with polysaccharide in the GlcNAc-T active site
Descriptor: Heparosan synthase B, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE, ...
Authors:Krahn, J.M, Pedersen, L.C, Liu, J, Stancanelli, E, Borgnia, M, Vivarette, E.
Deposit date:2024-01-05
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural and Functional Analysis of Heparosan Synthase 2 from Pasteurella multocida to Improve the Synthesis of Heparin
Acs Catalysis, 14, 2024
5IK4
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BU of 5ik4 by Molmil
Laminin A2LG45 C-form, Apo.
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Briggs, D.C, Hohenester, E, Campbell, K.P.
Deposit date:2016-03-03
Release date:2016-08-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Structural basis of laminin binding to the LARGE glycans on dystroglycan.
Nat.Chem.Biol., 12, 2016
6VUC
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BU of 6vuc by Molmil
Crystal structure of BRD4 bromodomain 1 with N-methylpyrrolidin-2-one (NMP) derivative 7b (1-methyl-4-(4-(piperidin-1-ylsulfonyl)phenyl)pyrrolidin-2-one)
Descriptor: (4R)-1-methyl-4-{4-[(piperidin-1-yl)sulfonyl]phenyl}pyrrolidin-2-one, Bromodomain-containing protein 4
Authors:Ilyichova, O.V, Scanlon, M.J, Thompson, P.E.
Deposit date:2020-02-14
Release date:2020-02-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Substituted 1-methyl-4-phenylpyrrolidin-2-ones - Fragment-based design of N-methylpyrrolidone-derived bromodomain inhibitors.
Eur.J.Med.Chem., 191, 2020
9AT8
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BU of 9at8 by Molmil
Fab 77-stabilized MeV F ectodomain fragment
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0, mAB 77 heavy chain, ...
Authors:Zyla, D, Saphire, E.O.
Deposit date:2024-02-26
Release date:2024-07-03
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:A neutralizing antibody prevents postfusion transition of measles virus fusion protein.
Science, 384, 2024
8VSX
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BU of 8vsx by Molmil
NMR Structure of GCAP5 R22A
Descriptor: Guanylyl cyclase-activating protein 1
Authors:Cudia, D.L, Ames, J.B.
Deposit date:2024-01-24
Release date:2024-05-08
Last modified:2024-06-05
Method:SOLUTION NMR
Cite:NMR Structure of Retinal Guanylate Cyclase Activating Protein 5 (GCAP5) with R22A Mutation That Abolishes Dimerization and Enhances Cyclase Activation.
Biochemistry, 63, 2024
8ZMY
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BU of 8zmy by Molmil
F0502B-bound WT polymorph 5a alpha-synuclein fibril
Descriptor: 2-bromanyl-4-[(~{E})-2-[6-[2-(2-fluoranylethoxy)ethyl-methyl-amino]-5-methyl-1,3-benzothiazol-2-yl]ethenyl]phenol, Alpha-synuclein
Authors:Liu, K.E, Tao, Y.Q, Li, D, Liu, C.
Deposit date:2024-05-24
Release date:2024-09-11
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Binding adaptability of chemical ligands to polymorphic alpha-synuclein amyloid fibrils.
Proc.Natl.Acad.Sci.USA, 121, 2024
9B9N
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BU of 9b9n by Molmil
Crystal structure of FlcD from Pseudomonas aeruginosa bound to iron (II) and substrate
Descriptor: (2R)-2-{[(2Z)-2-(hydroxyimino)ethyl]sulfanyl}butanedioic acid, FE (III) ION, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C
Authors:Walker, M.E, Grove, T.L, Li, B, Redinbo, M.R.
Deposit date:2024-04-02
Release date:2024-07-31
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural Basis for Methine Excision by a Heme Oxygenase-like Enzyme.
Acs Cent.Sci., 10, 2024
9G9R
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BU of 9g9r by Molmil
Crystal structure of PbdA bound to p-ethylbenzoate
Descriptor: 4-ethylbenzoic acid, Cytochrome P450 CYP199, GLYCEROL, ...
Authors:Hinchen, D.J, Wolf, M.E, Eltis, L.D, McGeehan, J.E.
Deposit date:2024-07-25
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Characterization of a cytochrome P450 that catalyzes the O-demethylation of lignin-derived benzoates.
J.Biol.Chem., 2024
7PHZ
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BU of 7phz by Molmil
Crystal structure of X77 bound to the main protease (3CLpro/Mpro) of SARS-CoV-2 in spacegroup P2(1)2(1)2(1).
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Costanzi, E, Demitri, N, Storici, P.
Deposit date:2021-08-19
Release date:2022-09-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Unexpected Single-Ligand Occupancy and Negative Cooperativity in the SARS-CoV-2 Main Protease.
J.Chem.Inf.Model., 64, 2024
8W04
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BU of 8w04 by Molmil
Crystal structure of DUF1735-domain containing protein (GH18-like) from Bacteroides faecium at 2.9 A resolution (Space group P21)
Descriptor: DUF1735 domain-containing protein
Authors:Sastre, D.E, Navarro, M.V.A.S, Sultana, N, Sundberg, E.J.
Deposit date:2024-02-13
Release date:2024-05-29
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate.
Nat Commun, 15, 2024
7PKA
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BU of 7pka by Molmil
Synechocystis sp. PCC6803 glutathione transferase Chi 1, GSOH bound
Descriptor: Glutathione S-transferase, POTASSIUM ION, S-Hydroxy-Glutathione
Authors:Didierjean, C, Mocchetti, E, Hecker, A, Favier, F.
Deposit date:2021-08-25
Release date:2022-09-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structure and functions of glutathione transferase Chi 1 from cyanobacterium Synechocystis sp. PCC 6803
To Be Published
6QPF
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BU of 6qpf by Molmil
Influenza A virus Polymerase Heterotrimer A/duck/Fujian/01/2002(H5N1)
Descriptor: Polymerase acidic protein, Polymerase basic protein 2, RNA-directed RNA polymerase catalytic subunit
Authors:Fan, H.T, Keown, J.R, Fodor, E, Grimes, J.M.
Deposit date:2019-02-13
Release date:2019-09-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.634 Å)
Cite:Structures of influenza A virus RNA polymerase offer insight into viral genome replication.
Nature, 573, 2019
9FYD
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BU of 9fyd by Molmil
tubulin - cryptophycin-uD[Dab] complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Dessin, C, Schachtsiek, T, Voss, J, Abel, A.-C, Neumann, B, Stammler, H.-G, Prota, A.E, Sewald, N.
Deposit date:2024-07-03
Release date:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Highly Cytotoxic Cryptophycin Derivatives with Modification in Unit D for Conjugation.
Angew.Chem.Int.Ed.Engl., 2024

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PDB entries from 2024-10-16

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