Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4TQD
DownloadVisualize
BU of 4tqd by Molmil
Crystal Structure of the C-terminal domain of IFRS bound with 3-iodo-L-Phe and ATP
Descriptor: 1,2-ETHANEDIOL, 3-iodo-L-phenylalanine, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Nakamura, A, O'Donoghue, P, Soll, D.
Deposit date:2014-06-11
Release date:2014-11-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1429 Å)
Cite:Polyspecific pyrrolysyl-tRNA synthetases from directed evolution.
Proc.Natl.Acad.Sci.USA, 111, 2014
4TQF
DownloadVisualize
BU of 4tqf by Molmil
Crystal Structure of the C-terminal domain of IFRS bound with 2-(5-bromothienyl)-L-Ala and ATP
Descriptor: 1,2-ETHANEDIOL, 3-(5-bromothiophen-2-yl)-L-alanine, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Nakamura, A, O'Donoghue, P, Soll, D.
Deposit date:2014-06-11
Release date:2014-11-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7143 Å)
Cite:Polyspecific pyrrolysyl-tRNA synthetases from directed evolution.
Proc.Natl.Acad.Sci.USA, 111, 2014
435D
DownloadVisualize
BU of 435d by Molmil
5'-R(*UP*AP*GP*CP*CP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3'
Descriptor: RNA (5'-R(*GP*GP*GP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*CP*CP*C)-3'), SODIUM ION
Authors:Mueller, U, Schuebel, H, Sprinzl, M, Heinemann, U.
Deposit date:1998-10-23
Release date:1999-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of acceptor stem of tRNA(Ala) from Escherichia coli shows unique G.U wobble base pair at 1.16 A resolution.
RNA, 5, 1999
434D
DownloadVisualize
BU of 434d by Molmil
5'-R(*UP*AP*GP*CP*UP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3'
Descriptor: RNA (5'-R(*GP*GP*GP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3'), SODIUM ION, ...
Authors:Mueller, U, Schuebel, H, Sprinzl, M, Heinemann, U.
Deposit date:1998-10-23
Release date:1999-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Crystal structure of acceptor stem of tRNA(Ala) from Escherichia coli shows unique G.U wobble base pair at 1.16 A resolution.
RNA, 5, 1999
1ZDI
DownloadVisualize
BU of 1zdi by Molmil
RNA BACTERIOPHAGE MS2 COAT PROTEIN/RNA COMPLEX
Descriptor: PROTEIN (RNA BACTERIOPHAGE MS2 COAT PROTEIN), RNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')
Authors:Valegard, K, Van Den Worm, S, Liljas, L.
Deposit date:1996-09-24
Release date:1997-04-21
Last modified:2023-04-19
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The three-dimensional structures of two complexes between recombinant MS2 capsids and RNA operator fragments reveal sequence-specific protein-RNA interactions.
J.Mol.Biol., 270, 1997
2L9B
DownloadVisualize
BU of 2l9b by Molmil
Heterodimer between Rna14p monkeytail domain and Rna15p hinge domain of the yeast CF IA complex
Descriptor: mRNA 3'-end-processing protein RNA14, mRNA 3'-end-processing protein RNA15
Authors:Moreno-Morcillo, M, Minvielle-Sebastia, L, Fribourg, S, Mackereth, C.D.
Deposit date:2011-02-07
Release date:2011-04-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Locked Tether Formation by Cooperative Folding of Rna14p Monkeytail and Rna15p Hinge Domains in the Yeast CF IA Complex.
Structure, 19, 2011
6NLY
DownloadVisualize
BU of 6nly by Molmil
Fragment of human mitochondrial Alanyl-tRNA Synthetase C-Ala domain
Descriptor: Alanine--tRNA ligase, mitochondrial
Authors:Kuhle, B, Schimmel, P.
Deposit date:2019-01-09
Release date:2020-01-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.307 Å)
Cite:Relaxed sequence constraints favor mutational freedom in idiosyncratic metazoan mitochondrial tRNAs.
Nat Commun, 11, 2020
6NOW
DownloadVisualize
BU of 6now by Molmil
Human Mitochondrial Alanyl-tRNA Synthetase C-Ala domain
Descriptor: Alanine--tRNA ligase, mitochondrial
Authors:Kuhle, B, Schimmel, P.
Deposit date:2019-01-16
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (4.099 Å)
Cite:Relaxed sequence constraints favor mutational freedom in idiosyncratic metazoan mitochondrial tRNAs.
Nat Commun, 11, 2020
6NLQ
DownloadVisualize
BU of 6nlq by Molmil
Human Mitochondrial Alanyl-tRNA Synthetase C-terminal domain
Descriptor: Alanine--tRNA ligase, mitochondrial, CALCIUM ION
Authors:Kuhle, B, Schimmel, P.
Deposit date:2019-01-08
Release date:2020-01-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Relaxed sequence constraints favor mutational freedom in idiosyncratic metazoan mitochondrial tRNAs.
Nat Commun, 11, 2020
6ILD
DownloadVisualize
BU of 6ild by Molmil
Crystal Structure of Human LysRS: P38/AIMP2 Complex II
Descriptor: 5'-O-[(S)-hydroxy(methyl)phosphoryl]adenosine, Aminoacyl tRNA synthase complex-interacting multifunctional protein 2, GLYCEROL, ...
Authors:Hei, Z, Liu, Z, Wang, J, Fang, P.
Deposit date:2018-10-17
Release date:2019-02-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.882 Å)
Cite:Retractile lysyl-tRNA synthetase-AIMP2 assembly in the human multi-aminoacyl-tRNA synthetase complex.
J. Biol. Chem., 294, 2019
6MTK
DownloadVisualize
BU of 6mtk by Molmil
Crystal structure of Tryptophanyl-tRNA synthetase from Elizabethkingia anophelis NUHP1
Descriptor: Tryptophanyl-tRNA synthetase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-10-19
Release date:2018-11-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Tryptophanyl-tRNA synthetase from Elizabethkingia anophelis NUHP1
To be Published
3G98
DownloadVisualize
BU of 3g98 by Molmil
Crystal Structure of the C-Ala domain from Aquifex aeolicus alanyl-tRNA synthetase
Descriptor: Alanyl-tRNA synthetase
Authors:Guo, M, Yang, X.L, Schimmel, P.
Deposit date:2009-02-13
Release date:2009-10-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The C-Ala domain brings together editing and aminoacylation functions on one tRNA.
Science, 325, 2009
7QCF
DownloadVisualize
BU of 7qcf by Molmil
X-ray crystallographic structure of E. coli K-12 glycyl-tRNA synthetase alpha subunit (glyQ)
Descriptor: Glycine--tRNA ligase alpha subunit
Authors:Weeks, S.D, Munawar, A.H.
Deposit date:2021-11-23
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of E. coli K-12 glycyl-tRNA synthetase alpha subunit (glyQ)
To Be Published
6NHI
DownloadVisualize
BU of 6nhi by Molmil
Crystal structure of Histidine--tRNA ligase from Elizabethkingia sp. CCUG 26117
Descriptor: Histidine--tRNA ligase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-12-21
Release date:2019-01-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Histidine--tRNA ligase from Elizabethkingia sp. CCUG 26117
TO BE PUBLISHED
7XOF
DownloadVisualize
BU of 7xof by Molmil
Crystal structure of Oryza sativa plastid glycyl-tRNA synthetase
Descriptor: Glycine--tRNA ligase
Authors:Yu, Z, Lu, G, Li, J.
Deposit date:2022-05-01
Release date:2023-05-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Crystal structure of Oryza sativa plastid glycyl-tRNA synthetase
To be published
479D
DownloadVisualize
BU of 479d by Molmil
CRYSTAL STRUCTURE A DNA:RNA HYBRID DUPLEX, A DYNAMIC MODEL FOR RNASE H RECOGNITION
Descriptor: DNA (5'-D(*CP*TP*CP*TP*TP*CP*TP*TP*C)-3'), RNA (5'-R(*GP*AP*AP*GP*AP*AP*GP*AP*G)-3')
Authors:Xiong, Y, Sundaralingam, M.
Deposit date:1999-07-08
Release date:2000-05-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a DNA.RNA hybrid duplex with a polypurine RNA r(gaagaagag) and a complementary polypyrimidine DNA d(CTCTTCTTC).
Nucleic Acids Res., 28, 2000
7WT6
DownloadVisualize
BU of 7wt6 by Molmil
Crystal structure of full-length peptidyl-tRNA hydrolase from Mycobacterium tuberculosis
Descriptor: Peptidyl-tRNA hydrolase
Authors:Kulandaisamy, R, Das, U, Inampudi, K.K.
Deposit date:2022-02-04
Release date:2022-04-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of full-length peptidyl-tRNA hydrolase from Mycobacterium tuberculosis
To Be Published
5A1N
DownloadVisualize
BU of 5a1n by Molmil
The crystal structure of the GST-like domains complex of EPRS-AIMP2 mutant S156D
Descriptor: AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONAL PROTEIN 2, BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASE, GLYCEROL
Authors:Cho, H.Y, Choi, Y.S, Kang, B.S.
Deposit date:2015-05-03
Release date:2016-06-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Symmetric Assembly of a Decameric Subcomplex in Human Multi-tRNA Synthetase Complex Via Interactions between Glutathione Transferase-Homology Domains and Aspartyl-tRNA Synthetase.
J.Mol.Biol., 2019
8TC7
DownloadVisualize
BU of 8tc7 by Molmil
Human asparaginyl-tRNA synthetase, apo form
Descriptor: Asparagine--tRNA ligase, cytoplasmic, CHLORIDE ION, ...
Authors:Dogovski, C, Metcalfe, R.D, Xie, S.C, Morton, C.J, Tilley, L, Griffin, M.D.W.
Deposit date:2023-06-30
Release date:2024-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Reaction hijacking inhibition of Plasmodium falciparum asparagine tRNA synthetase.
Nat Commun, 15, 2024
485D
DownloadVisualize
BU of 485d by Molmil
A SULFATE POCKET FORMED BY THREE GOU PAIRS IN THE STRUCTURE OF A NONAMERIC RNA
Descriptor: RNA/DNA(5'-R(*CP*GP*UP*GP*AP*UP*CP*GP)-D(*C)-3'), SULFATE ION
Authors:Masquida, B, Sauter, C, Westhof, E.
Deposit date:1999-08-13
Release date:1999-12-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:A sulfate pocket formed by three GoU pairs in the 0.97 A resolution X-ray structure of a nonameric RNA.
RNA, 5, 1999
8TC9
DownloadVisualize
BU of 8tc9 by Molmil
Human asparaginyl-tRNA synthetase bound to OSM-S-106
Descriptor: Asparagine--tRNA ligase, cytoplasmic, GLYCEROL, ...
Authors:Dogovski, C, Metcalfe, R.D, Xie, S.C, Morton, C.J, Tilley, L, Griffin, M.D.W.
Deposit date:2023-06-30
Release date:2024-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Reaction hijacking inhibition of Plasmodium falciparum asparagine tRNA synthetase.
Nat Commun, 15, 2024
7BT5
DownloadVisualize
BU of 7bt5 by Molmil
Crystal structure of plasmodium LysRS complexing with an antitumor compound
Descriptor: LYSINE, Lysine--tRNA ligase, N4-[2-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidin-1-yl]phenyl]-N2-(2-propan-2-ylsulfonylphenyl)-1,3,5-triazine-2,4-diamine
Authors:Zhou, J, Wang, J, Fang, P.
Deposit date:2020-03-31
Release date:2020-09-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.493 Å)
Cite:Inhibition of Plasmodium falciparum Lysyl-tRNA synthetase via an anaplastic lymphoma kinase inhibitor.
Nucleic Acids Res., 48, 2020
6IYE
DownloadVisualize
BU of 6iye by Molmil
Crystal structure of peptidyl-tRNA hydrolase from Acinetobacter baumannii with 12% PEG 1500 at 1.55 A resolution.
Descriptor: Peptidyl-tRNA hydrolase
Authors:Viswanathan, V, Sharma, P, Chaudhary, A, Sharma, S, Singh, T.P.
Deposit date:2018-12-15
Release date:2018-12-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of peptidyl-tRNA hydrolase from Acinetobacter baumannii with 12% PEG 1500 at 1.55 A resolution.
To Be Published
6JGU
DownloadVisualize
BU of 6jgu by Molmil
Crystal structure at atomic resolution reveals the catalytic mechanism in peptidyl-tRNA hydrolase from Acinetobacter baumannii.
Descriptor: Peptidyl-tRNA hydrolase
Authors:Viswanathan, V, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2019-02-14
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Crystal structure at atomic resolution reveals the catalytic mechanism in peptidyl-tRNA hydrolase from Acinetobacter baumannii.
To Be Published
7CSN
DownloadVisualize
BU of 7csn by Molmil
Crystal structure of peptidyl-tRNA hydrolase from Acinetobacter baumannii at 1.00 A resolution
Descriptor: Peptidyl-tRNA hydrolase
Authors:Viswanathan, V, Sharma, P, Singh, P.K, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2020-08-15
Release date:2020-09-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1 Å)
Cite:Crystal structure of peptidyl-tRNA hydrolase from Acinetobacter baumannii at 1.00 A resolution
To Be Published

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon