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1O0H
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BU of 1o0h by Molmil
Ribonuclease A in complex with 5'-ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Ribonuclease pancreatic
Authors:Leonidas, D.D, Oikonomakos, N.G, Chrysina, E.D, Kosmopoulou, M.N, Vlassi, M.
Deposit date:2003-02-21
Release date:2003-12-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:High-resolution crystal structures of ribonuclease A complexed with adenylic and uridylic nucleotide inhibitors. Implications for structure-based design of ribonucleolytic inhibitors
PROTEIN SCI., 12, 2003
1R8W
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BU of 1r8w by Molmil
Native structure of the B12-independent glycerol dehydratase from clostridium butyricum
Descriptor: glycerol dehydratase
Authors:Lanzilotta, W.N, Soucaille, P, O'Brien, J.R, Raynaud, C.
Deposit date:2003-10-28
Release date:2004-06-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insight into the mechanism of the B12-independent glycerol dehydratase from Clostridium butyricum: preliminary biochemical and structural characterization.
Biochemistry, 43, 2004
4Y9J
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BU of 4y9j by Molmil
Crystal Structure of Caenorhabditis elegans ACDH-11 in complex with C11-CoA
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Protein ACDH-11, isoform b, ...
Authors:Li, Z.J, Sun, F.
Deposit date:2015-02-17
Release date:2015-06-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Acyl-CoA Dehydrogenase Drives Heat Adaptation by Sequestering Fatty Acids
Cell, 161, 2015
6YA0
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BU of 6ya0 by Molmil
Crystal structure of TSWV glycoprotein N ectodomain (Trypsin treated)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, AMMONIUM ION, ...
Authors:Dessau, M, Bahat, Y.
Deposit date:2020-03-11
Release date:2020-09-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Crystal structure of tomato spotted wilt virus G N reveals a dimer complex formation and evolutionary link to animal-infecting viruses
Proc.Natl.Acad.Sci.USA, 117, 2020
4YJQ
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BU of 4yjq by Molmil
SYK kinase domain in complex with inhibitor GTC000224
Descriptor: 3-[1H-indazol-4-yl(2-{[3-(4-methyl-1,3-oxazol-5-yl)phenyl]amino}pyrimidin-4-yl)amino]propan-1-ol, Tyrosine-protein kinase SYK
Authors:Somers, D.O, Neu, M, Stuckey, J.
Deposit date:2015-03-03
Release date:2015-09-30
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Discovery of GSK143, a highly potent, selective and orally efficacious spleen tyrosine kinase inhibitor.
Bioorg. Med. Chem. Lett., 21, 2011
1O0O
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BU of 1o0o by Molmil
Ribonuclease A in complex with adenosine-2',5'-diphosphate
Descriptor: ADENOSINE-2'-5'-DIPHOSPHATE, Ribonuclease pancreatic
Authors:Leonidas, D.D, Oikonomakos, N.G, Chrysina, E.D, Kosmopoulou, M.N, Vlassi, M.
Deposit date:2003-02-24
Release date:2003-12-09
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:High-resolution crystal structures of ribonuclease A complexed with adenylic and uridylic nucleotide inhibitors. Implications for structure-based design of ribonucleolytic inhibitors
PROTEIN SCI., 12, 2003
8CQO
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BU of 8cqo by Molmil
Crystal structure of Borrelia burgdorferi paralogous family 12 outer surface protein BBK01 (Se-Met data)
Descriptor: Lipoprotein, putative
Authors:Brangulis, K, Drunka, L, Matisone, S, Akopjana, I, Tars, K.
Deposit date:2023-03-06
Release date:2024-03-13
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Members of the paralogous gene family 12 from the Lyme disease agent Borrelia burgdorferi are non-specific DNA-binding proteins.
Plos One, 19, 2024
8CQN
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BU of 8cqn by Molmil
Crystal structure of Borrelia burgdorferi paralogous family 12 outer surface protein BBK01
Descriptor: Lipoprotein, putative
Authors:Brangulis, K, Drunka, L, Matisone, S, Akopjana, I, Tars, K.
Deposit date:2023-03-06
Release date:2024-03-13
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Members of the paralogous gene family 12 from the Lyme disease agent Borrelia burgdorferi are non-specific DNA-binding proteins.
Plos One, 19, 2024
4WKY
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BU of 4wky by Molmil
Streptomcyes albus JA3453 oxazolomycin ketosynthase domain OzmN KS2
Descriptor: 1,2-ETHANEDIOL, Beta-ketoacyl synthase, GLYCEROL, ...
Authors:Cuff, M.E, Mack, J.C, Endres, M, Babnigg, G, Bingman, C.A, Yennamalli, R, Lohman, J.R, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2014-10-03
Release date:2014-10-29
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and evolutionary relationships of "AT-less" type I polyketide synthase ketosynthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
2FMJ
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BU of 2fmj by Molmil
220-loop mutant of streptomyces griseus trypsin
Descriptor: CALCIUM ION, SULFATE ION, Trypsin
Authors:Page, M.J, Di Cera, E.
Deposit date:2006-01-09
Release date:2006-05-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Conversion of trypsin into a Na(+)-activated enzyme.
Biochemistry, 45, 2006
2JAE
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BU of 2jae by Molmil
The structure of L-amino acid oxidase from Rhodococcus opacus in the unbound state
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, L-AMINO ACID OXIDASE
Authors:Faust, A, Niefind, K, Hummel, W, Schomburg, D.
Deposit date:2006-11-27
Release date:2007-01-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The Structure of a Bacterial L-Amino Acid Oxidase from Rhodococcus Opacus Gives New Evidence for the Hydride Mechanism for Dehydrogenation.
J.Mol.Biol., 367, 2007
1O0N
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BU of 1o0n by Molmil
Ribonuclease A in complex with uridine-3'-phosphate
Descriptor: 3'-URIDINEMONOPHOSPHATE, Ribonuclease pancreatic
Authors:Leonidas, D.D, Oikonomakos, N.G, Chrysina, E.D, Kosmopoulou, M.N, Vlassi, M.
Deposit date:2003-02-24
Release date:2003-12-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High-resolution crystal structures of ribonuclease A complexed with adenylic and uridylic nucleotide inhibitors. Implications for structure-based design of ribonucleolytic inhibitors
PROTEIN SCI., 12, 2003
6YA2
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BU of 6ya2 by Molmil
Crystal structure of TSWV glycoprotein N ectodomain (Trypsin treated)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein
Authors:Dessau, M, Bahat, Y.
Deposit date:2020-03-11
Release date:2020-09-30
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of tomato spotted wilt virus G N reveals a dimer complex formation and evolutionary link to animal-infecting viruses
Proc.Natl.Acad.Sci.USA, 117, 2020
4YXC
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BU of 4yxc by Molmil
Complex of FliM(SPOA)::FliN fusion protein and FliH(APAR)::T4lysozyme fusion protein
Descriptor: Flagellar assembly protein H,Endolysin, Flagellar motor switch protein FliM,Flagellar motor switch protein FliN
Authors:Notti, R.Q, Stebbins, C.E.
Deposit date:2015-03-23
Release date:2015-06-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A common assembly module in injectisome and flagellar type III secretion sorting platforms.
Nat Commun, 6, 2015
8FEY
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BU of 8fey by Molmil
Solution structure of Pmu1a
Descriptor: Pmu1a toxin
Authors:Daly, N.L, Wilson, D.T.
Deposit date:2022-12-07
Release date:2023-03-29
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Pmu1a, a novel spider toxin with dual inhibitory activity at pain targets hNa V 1.7 and hCa V 3 voltage-gated channels.
Febs J., 290, 2023
2JPH
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BU of 2jph by Molmil
NMR solution structure of the Rho GTPase binding domain of human plexin-b1
Descriptor: Plexin-B1
Authors:Tong, Y, Buck, M.
Deposit date:2007-05-11
Release date:2008-03-18
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Insights into Oncogenic Mutations of Plexin-B1 Based on the Solution Structure of the Rho GTPase Binding Domain
Structure, 16, 2008
4YGO
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BU of 4ygo by Molmil
Dodecameric structure of spermidine N-acetyltransferase from Vibrio cholerae in intermediate state
Descriptor: CALCIUM ION, METHANOL, Spermidine n1-acetyltransferase
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-02-26
Release date:2015-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Substrate-Induced Allosteric Change in the Quaternary Structure of the Spermidine N-Acetyltransferase SpeG.
J.Mol.Biol., 427, 2015
4Y9L
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BU of 4y9l by Molmil
Crystal Structure of Caenorhabditis elegans ACDH-11
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Protein ACDH-11, isoform b
Authors:Li, Z.J, Zhai, Y.J, Zhang, K, Sun, F.
Deposit date:2015-02-17
Release date:2015-06-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Acyl-CoA Dehydrogenase Drives Heat Adaptation by Sequestering Fatty Acids
Cell, 161, 2015
4YJR
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BU of 4yjr by Molmil
SYK kinase domain in complex with inhibitor GTC000225
Descriptor: 3-(1H-indazol-4-yl{2-[(1-methyl-1H-indazol-5-yl)amino]pyrimidin-4-yl}amino)propan-1-ol, Tyrosine-protein kinase SYK
Authors:Somers, D.O, Neu, M, Stuckey, J.
Deposit date:2015-03-03
Release date:2015-09-30
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Discovery of GSK143, a highly potent, selective and orally efficacious spleen tyrosine kinase inhibitor.
Bioorg. Med. Chem. Lett., 21, 2011
6XNG
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BU of 6xng by Molmil
MHC-like protein complex structure
Descriptor: (3R)-N-[(2S,3R)-1-(alpha-D-galactopyranosyloxy)-3-hydroxyheptadecan-2-yl]-3-hydroxyheptadecanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
Authors:Thirunavukkarasu, P, Le Nours, J, Rossjohn, J.
Deposit date:2020-07-02
Release date:2021-11-10
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Host immunomodulatory lipids created by symbionts from dietary amino acids.
Nature, 600, 2021
4DOM
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BU of 4dom by Molmil
Crystal Structure of the TIR-domain of Human Myeloid Differentiation Primary Response protein (MyD88)
Descriptor: Myeloid differentiation primary response protein MyD88
Authors:Jiang, J.S, Snyder, G.A, Xiao, T.
Deposit date:2012-02-09
Release date:2013-04-10
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Molecular mechanisms for the subversion of MyD88 signaling by TcpC from virulent uropathogenic Escherichia coli.
Proc.Natl.Acad.Sci.USA, 110, 2013
6XEH
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BU of 6xeh by Molmil
Solution NMR Structure of DE NOVO DESIGNED Rossmann 2x3 Fold Protein r2x3_168, Northeast Structural Genomics Consortium (NESG) Target OR386
Descriptor: DE NOVO DESIGNED OR386
Authors:Liu, G, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2020-06-12
Release date:2020-08-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Role of backbone strain in de novo design of complex alpha/beta protein structures Accurate de novo design of asymetric alpha/beta proteins with ten or more secondary structure elements requires consideration of backbone strain Design principle proposed from designed larger alpha/beta-proteins not folded as designed: Consistency between local, non-local, and global structures
To Be Published
4YX5
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BU of 4yx5 by Molmil
SpaO(SPOA1,2)
Descriptor: CHLORIDE ION, Surface presentation of antigens protein SpaO
Authors:Notti, R.Q, Stebbins, C.E.
Deposit date:2015-03-22
Release date:2015-06-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9001 Å)
Cite:A common assembly module in injectisome and flagellar type III secretion sorting platforms.
Nat Commun, 6, 2015
4YXA
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BU of 4yxa by Molmil
Complex of SpaO(SPOA1,2 SeMet) and OrgB(APAR)::T4lysozyme fusion protein
Descriptor: Oxygen-regulated invasion protein OrgB,Endolysin, Surface presentation of antigens protein SpaO
Authors:Notti, R.Q, Stebbins, C.E.
Deposit date:2015-03-22
Release date:2015-06-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A common assembly module in injectisome and flagellar type III secretion sorting platforms.
Nat Commun, 6, 2015
8IPT
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BU of 8ipt by Molmil
Cryo-EM structure of heme transporter CydDC from Escherichia coli in the occluded ATP bound state
Descriptor: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC, ...
Authors:Zhu, C, Li, J.
Deposit date:2023-03-14
Release date:2023-06-14
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structures of a prokaryotic heme transporter CydDC.
Protein Cell, 14, 2023

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