PDB: 7404 resultsInfo pagesStatus searchChemie searchBIRD

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8CEH	Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... Authors: Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. Deposit date: 2023-02-01 Release date: 2023-09-20 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.05 Å) Cite: mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024
6O90	Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05 Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Jogl, G, Khayat, R. Deposit date: 2019-03-12 Release date: 2020-09-23 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.49 Å) Cite: Cryo-electron microscopy structure of the 70S ribosome from Enterococcus faecalis. Sci Rep, 10, 2020
6O8Y	Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class03 Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Jogl, G, Khayat, R. Deposit date: 2019-03-12 Release date: 2020-09-23 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (4.14 Å) Cite: Cryo-electron microscopy structure of the 70S ribosome from Enterococcus faecalis. Sci Rep, 10, 2020
6O8W	Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01 Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Jogl, G, Khayat, R. Deposit date: 2019-03-12 Release date: 2020-09-23 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.53 Å) Cite: Cryo-electron microscopy structure of the 70S ribosome from Enterococcus faecalis. Sci Rep, 10, 2020
7PJT	Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Petrychenko, V, Peng, B.Z, Schwarzer, A.C, Peske, F, Rodnina, M.V, Fischer, N. Deposit date: 2021-08-24 Release date: 2021-10-20 Last modified: 2024-10-16 Method: ELECTRON MICROSCOPY (6 Å) Cite: Structural mechanism of GTPase-powered ribosome-tRNA movement. Nat Commun, 12, 2021
7PJX	Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Petrychenko, V, Peng, B.Z, Schwarzer, A.C, Peske, F, Rodnina, M.V, Fischer, N. Deposit date: 2021-08-24 Release date: 2021-10-20 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (6.5 Å) Cite: Structural mechanism of GTPase-powered ribosome-tRNA movement. Nat Commun, 12, 2021
7PJW	Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Petrychenko, V, Peng, B.Z, Schwarzer, A.C, Peske, F, Rodnina, M.V, Fischer, N. Deposit date: 2021-08-24 Release date: 2021-10-20 Last modified: 2024-10-16 Method: ELECTRON MICROSCOPY (4 Å) Cite: Structural mechanism of GTPase-powered ribosome-tRNA movement. Nat Commun, 12, 2021
8CKU	Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... Authors: Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. Deposit date: 2023-02-16 Release date: 2023-09-20 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.11 Å) Cite: mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024
8CIV	Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... Authors: Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. Deposit date: 2023-02-10 Release date: 2023-09-20 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.47 Å) Cite: mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024
7PJZ	Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Petrychenko, V, Peng, B.Z, Schwarzer, A.C, Peske, F, Rodnina, M.V, Fischer, N. Deposit date: 2021-08-24 Release date: 2021-10-20 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (6 Å) Cite: Structural mechanism of GTPase-powered ribosome-tRNA movement. Nat Commun, 12, 2021
8CMJ	Translocation intermediate 4 (TI-4*) of 80S S. cerevisiae ribosome with eEF2 in the absence of sordarin Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... Authors: Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. Deposit date: 2023-02-20 Release date: 2023-09-20 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.79 Å) Cite: mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024
8CG8	Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... Authors: Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. Deposit date: 2023-02-03 Release date: 2023-09-20 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.57 Å) Cite: mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024
6O8Z	Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04 Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Jogl, G, Khayat, R. Deposit date: 2019-03-12 Release date: 2020-09-16 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.49 Å) Cite: Cryo-electron microscopy structure of the 70S ribosome from Enterococcus faecalis. Sci Rep, 10, 2020
8CF5	Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... Authors: Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. Deposit date: 2023-02-02 Release date: 2023-09-20 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.71 Å) Cite: mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024
8CGN	Non-rotated 80S S. cerevisiae ribosome with ligands Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... Authors: Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. Deposit date: 2023-02-06 Release date: 2023-09-20 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.28 Å) Cite: mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024
7QWS	Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ... Authors: Jomaa, A, Gamerdinger, M, Hsieh, H, Wallisch, A, Chandrasekaran, V, Ulusoy, Z, Scaiola, A, Hegde, R, Shan, S, Ban, N, Deuerling, E. Deposit date: 2022-01-25 Release date: 2022-03-09 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Mechanism of signal sequence handover from NAC to SRP on ribosomes during ER-protein targeting. Science, 375, 2022
6O8X	Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02 Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Jogl, G, Khayat, R. Deposit date: 2019-03-12 Release date: 2020-09-23 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.68 Å) Cite: Cryo-electron microscopy structure of the 70S ribosome from Enterococcus faecalis. Sci Rep, 10, 2020
7NAS	Bacterial 30S ribosomal subunit assembly complex state A (multibody refinement for body domain of 30S ribosome) Descriptor: 16S rRNA, 30S ribosomal protein S11, 30S ribosomal protein S12, ... Authors: Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S. Deposit date: 2021-01-25 Release date: 2021-07-07 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.31 Å) Cite: A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit. Sci Adv, 7, 2021
487D	SEVEN RIBOSOMAL PROTEINS FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP OF THE LARGE 50S SUBUNIT AT 7.5 ANGSTROMS RESOLUTION Descriptor: 50S ribosomal protein L1, 50S ribosomal protein L11, 50S ribosomal protein L14, ... Authors: Brimacombe, R, Mueller, F. Deposit date: 2000-02-23 Release date: 2000-04-10 Last modified: 2023-06-07 Method: ELECTRON MICROSCOPY (7.5 Å) Cite: The 3D arrangement of the 23 S and 5 S rRNA in the Escherichia coli 50 S ribosomal subunit based on a cryo-electron microscopic reconstruction at 7.5 A resolution. J.Mol.Biol., 298, 2000
8OVJ	CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN Descriptor: 40S ribosomal protein S12, 40S ribosomal protein S14, 40S ribosomal protein S19-like protein, ... Authors: Rajan, K.S, Yonath, A. Deposit date: 2023-04-26 Release date: 2024-05-08 Last modified: 2024-10-16 Method: ELECTRON MICROSCOPY (2.4 Å) Cite: Structural and mechanistic insights into the function of Leishmania ribosome lacking a single pseudouridine modification. Cell Rep, 43, 2024
8B0X	Translating 70S ribosome in the unrotated state (P and E, tRNAs) Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Fromm, S.A, O'Connor, K.M, Purdy, M, Bhatt, P.R, Loughran, G, Atkins, J.F, Jomaa, A, Mattei, S. Deposit date: 2022-09-08 Release date: 2022-11-30 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (1.55 Å) Cite: The translating bacterial ribosome at 1.55 angstrom resolution generated by cryo-EM imaging services. Nat Commun, 14, 2023
6Z1P	Structure of the mitochondrial ribosome from Tetrahymena thermophila Descriptor: 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, ... Authors: Tobiasson, V, Amunts, A. Deposit date: 2020-05-14 Release date: 2020-06-24 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Ciliate mitoribosome illuminates evolutionary steps of mitochondrial translation. Elife, 9, 2020
6EML	Cryo-EM structure of a late pre-40S ribosomal subunit from Saccharomyces cerevisiae Descriptor: 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, 40S ribosomal protein S11-A, ... Authors: Heuer, A, Thomson, E, Schmidt, C, Berninghausen, O, Becker, T, Hurt, E, Beckmann, R. Deposit date: 2017-10-02 Release date: 2017-11-29 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Cryo-EM structure of a late pre-40S ribosomal subunit fromSaccharomyces cerevisiae. Elife, 6, 2017
8QOI	Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA Descriptor: 18S rRNA (1740-MER), 28S rRNA (3773-MER), 40S ribosomal protein S10, ... Authors: Holvec, S, Barchet, C, Frechin, L, Hazemann, I, von Loeffelholz, O, Klaholz, B.P. Deposit date: 2023-09-29 Release date: 2024-06-12 Last modified: 2024-08-28 Method: ELECTRON MICROSCOPY (1.9 Å) Cite: The structure of the human 80S ribosome at 1.9 angstrom resolution reveals the molecular role of chemical modifications and ions in RNA. Nat.Struct.Mol.Biol., 31, 2024
5ANB	Mechanism of eIF6 release from the nascent 60S ribosomal subunit Descriptor: 26S RIBOSOMAL RNA, 60S ACIDIC RIBOSOMAL PROTEIN P0, 60S RIBOSOMAL PROTEIN L10, ... Authors: Weis, F, Giudice, E, Churcher, M, Jin, L, Hilcenko, C, Wong, C.C, Traynor, D, Kay, R.R, Warren, A.J. Deposit date: 2015-09-06 Release date: 2015-10-21 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Mechanism of Eif6 Release from the Nascent 60S Ribosomal Subunit Nat.Struct.Mol.Biol., 22, 2015

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