PDB: 910 resultsInfo pagesStatus searchChemie searchBIRD

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7YV5	genetically encoded pH sensor Lime at pH6 Descriptor: Lime Authors: Wen, Y, Shen, Y, Campbell, R, Lemieux, M.J. Deposit date: 2022-08-18 Release date: 2023-08-16 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.85 Å) Cite: Rational Engineering of an Improved Genetically Encoded pH Sensor Based on Superecliptic pHluorin. ACS Sens, 8, 2023
7YV3	genetically encoded pH sensor Lime at pH10 Descriptor: Lime Authors: Wen, Y, Shen, Y, Campbell, R, Lemieux, M.J. Deposit date: 2022-08-18 Release date: 2023-08-16 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2 Å) Cite: Rational Engineering of an Improved Genetically Encoded pH Sensor Based on Superecliptic pHluorin. ACS Sens, 8, 2023
8ARM	Crystal structure of LSSmScarlet2 Descriptor: LSSmScarlet2, SULFATE ION Authors: Samygina, V.R, Subach, O.M, Vlaskina, A.V, Subach, F.V. Deposit date: 2022-08-17 Release date: 2022-11-02 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.41 Å) Cite: LSSmScarlet2 and LSSmScarlet3, Chemically Stable Genetically Encoded Red Fluorescent Proteins with a Large Stokes' Shift. Int J Mol Sci, 23, 2022
7YRE	Crystal structure of a bright green fluorescent protein (StayGold) with triple mutations (N137A, Q140S, Y187F) in jellyfish Cytaeis uchidae from Biortus Descriptor: 1,2-ETHANEDIOL, staygold(N137A,Q140S,Y187F) Authors: Wu, J, Wang, F, Gui, W, Cheng, W, Yang, Y. Deposit date: 2022-08-09 Release date: 2023-08-16 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal structure of a bright green fluorescent protein (StayGold) with triple mutations (N137A, Q140S, Y187F) in jellyfish Cytaeis uchidae from Biortus To Be Published
8AM4	Cl-rsEGFP2 Long Wavelength Structure Descriptor: Green fluorescent protein Authors: Orr, C.M, Fadini, A, van Thor, J. Deposit date: 2022-08-02 Release date: 2023-08-02 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 2023
8DTA	Metal sensitive GFP (mseGFP) complexed with phenylarsine oxide. Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Green fluorescent protein, ... Authors: Rosenbaum, J.C, Carlson, A.E. Deposit date: 2022-07-25 Release date: 2023-07-05 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.81 Å) Cite: Glutathione modulates metal binding to proteins. TBD
8AHB	rsEGFP2 photoswitched to its off-state at room temperature and back-switched to its on-state at 100K Descriptor: Green fluorescent protein, SULFATE ION Authors: Mantovanelli, A, Adam, V. Deposit date: 2022-07-21 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Photophysical Studies at Cryogenic Temperature Reveal a Novel Photoswitching Mechanism of rsEGFP2. J.Am.Chem.Soc., 145, 2023
8AHA	rsEGFP2 photoswitched to its off-state at 100K Descriptor: Green fluorescent protein, SULFATE ION Authors: Mantovanelli, A, Adam, V. Deposit date: 2022-07-21 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.38 Å) Cite: Photophysical Studies at Cryogenic Temperature Reveal a Novel Photoswitching Mechanism of rsEGFP2. J.Am.Chem.Soc., 145, 2023
8DPD	superfolder GFP Tyr74pCNPhe mutant Descriptor: 1,2-ETHANEDIOL, CARBON DIOXIDE, DI(HYDROXYETHYL)ETHER, ... Authors: Phillips-Piro, C.M, Papoutsis, B, Piacentini, J. Deposit date: 2022-07-15 Release date: 2022-08-31 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.51 Å) Cite: Superfolder GFP Tyr74pCNPhe mutant To Be Published
8DN5	Cryo-EM structure of human Glycine Receptor alpha1-beta heteromer, glycine-bound state1(open state) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DECANE, GLYCINE, ... Authors: Liu, X, Wang, W. Deposit date: 2022-07-10 Release date: 2023-10-11 Last modified: 2023-11-01 Method: ELECTRON MICROSCOPY (3.63 Å) Cite: Asymmetric gating of a human hetero-pentameric glycine receptor. Nat Commun, 14, 2023
8DN3	Cryo-EM structure of human Glycine Receptor alpha1-beta heteromer, apo state Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, DECANE, ... Authors: Liu, X, Wang, W. Deposit date: 2022-07-10 Release date: 2023-10-11 Last modified: 2023-11-01 Method: ELECTRON MICROSCOPY (3.55 Å) Cite: Asymmetric gating of a human hetero-pentameric glycine receptor. Nat Commun, 14, 2023
8DN2	Cryo-EM structure of human Glycine Receptor alpha1-beta heteromer, glycine-bound state 2(expanded open) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DECANE, GLYCINE, ... Authors: Liu, X, Wang, W. Deposit date: 2022-07-10 Release date: 2023-10-11 Last modified: 2023-11-01 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Asymmetric gating of a human hetero-pentameric glycine receptor. Nat Commun, 14, 2023
8DN4	Cryo-EM structure of human Glycine Receptor alpha-1 beta heteromer, glycine-bound state3(desensitized state) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycine receptor subunit alpha-1, Glycine receptor subunit beta,Green fluorescent protein,Glycine receptor beta, ... Authors: Liu, X, Wang, W. Deposit date: 2022-07-10 Release date: 2023-10-11 Last modified: 2023-11-01 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Asymmetric gating of a human hetero-pentameric glycine receptor. Nat Commun, 14, 2023
7YEU	Superfolder green fluorescent protein with phosphine unnatural amino acid P3BF Descriptor: Superfolder green fluorescent protein Authors: Hu, C, Duan, H.Z, Liu, X.H, Chen, Y.X, Wang, J.Y. Deposit date: 2022-07-06 Release date: 2023-07-26 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Genetically Encoded Phosphine Ligand for Metalloprotein Design. J.Am.Chem.Soc., 144, 2022
7YDQ	Structure of PfNT1(Y190A)-GFP in complex with GSK4 Descriptor: 5-methyl-N-[2-(2-oxidanylideneazepan-1-yl)ethyl]-2-phenyl-1,3-oxazole-4-carboxamide, Nucleoside transporter 1,Green fluorescent protein Authors: Wang, C, Yu, L.Y, Li, J.L, Ren, R.B, Deng, D. Deposit date: 2022-07-04 Release date: 2023-04-26 Method: ELECTRON MICROSCOPY (4.04 Å) Cite: Structural basis of the substrate recognition and inhibition mechanism of Plasmodium falciparum nucleoside transporter PfENT1. Nat Commun, 14, 2023
8AAB	S148F mutant of blue-to-red fluorescent timer mRubyFT Descriptor: mRubyFT S148F mutant of blue-to-red fluorescent timer Authors: Boyko, K.M, Nikolaeva, A.Y, Vlaskina, A.V, Dorovatovskii, P.V, Subach, O.M, Popov, V.O, Subach, F.V. Deposit date: 2022-06-30 Release date: 2022-08-17 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.6 Å) Cite: mRubyFT/S147I, a mutant of blue-to-red fluorescent timer Crystallography Reports, 2022
8DHR	An ester mutant of SfGFP Descriptor: Green fluorescent protein Authors: Reddi, R, Valiyaveetil, F.I. Deposit date: 2022-06-28 Release date: 2024-01-17 Method: X-RAY DIFFRACTION (1.75 Å) Cite: A facile approach for incorporating tyrosine esters to probe ion-binding sites and backbone hydrogen bonds. J.Biol.Chem., 300, 2023
7YAO	Crystal structure of a bright green fluorescent protein (oxStayGold) in jellyfish Cytaeis uchidae from Biortus Descriptor: oxstaygold Authors: Wu, J, Wang, F, Gui, W, Cheng, W, Yang, Y. Deposit date: 2022-06-28 Release date: 2023-07-19 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Crystal structure of a bright green fluorescent protein (oxStayGold) in jellyfish Cytaeis uchidae from Biortus To Be Published
7Y96	Crystal structure of the carboxy-terminal domain of a coronavirus M protein fused with a split GFP Descriptor: Green fluorescent protein,Membrane protein Authors: Wang, X, Sun, Z, Zhou, X. Deposit date: 2022-06-24 Release date: 2022-08-17 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (3.415 Å) Cite: Crystal structure of the membrane (M) protein from a bat betacoronavirus. Pnas Nexus, 2, 2023
8DFL	Structure of human Kv1.3 with A0194009G09 nanobodies (alternate conformation) Descriptor: Nanobody A0194009G09, POTASSIUM ION, Potassium voltage-gated channel subfamily A member 3,Green fluorescent protein fusion Authors: Meyerson, J.R, Selvakumar, P. Deposit date: 2022-06-22 Release date: 2022-07-13 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3.25 Å) Cite: Structures of the T cell potassium channel Kv1.3 with immunoglobulin modulators. Nat Commun, 13, 2022
8A83	rsEGFP2 with a chlorinated chromophore in the fluorescent ON-state in a crystal dehydrated after illumination Descriptor: Green fluorescent protein, SULFATE ION Authors: Fadini, A, van Thor, J, Chang, J. Deposit date: 2022-06-21 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.81 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A7V	Room temperature rsEGFP2 in its OFF-state obtained with SFX Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-21 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.46 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6S	Room temperature rsEGFP2 with a chlorinated chromophore 1 microsecond after Photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-19 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6O	Room temperature rsEGFP2 with a chlorinated chromophore 600 fs after Photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6P	Room temperature rsEGFP2 with a chlorinated chromophore 900 fs after photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023

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