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5J68
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Structure of Astrotactin-2, a conserved vertebrate-specific and perforin-like membrane protein involved in neuronal development
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Astrotactin-2, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, ...
Authors:Ni, T, Harlos, K, Gilbert, R.J.C.
Deposit date:2016-04-04
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (5.221 Å)
Cite:Structure of astrotactin-2: a conserved vertebrate-specific and perforin-like membrane protein involved in neuronal development.
Open Biology, 6, 2016
5J89
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Structure of human Programmed cell death 1 ligand 1 (PD-L1) with low molecular mass inhibitor
Descriptor: 1,2-ETHANEDIOL, N-{2-[({2-methoxy-6-[(2-methyl[1,1'-biphenyl]-3-yl)methoxy]pyridin-3-yl}methyl)amino]ethyl}acetamide, Programmed cell death 1 ligand 1
Authors:Zak, K.M, Grudnik, P, Guzik, K, Zieba, B.J, Musielak, B, Doemling, P, Dubin, G, Holak, T.A.
Deposit date:2016-04-07
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for small molecule targeting of the programmed death ligand 1 (PD-L1).
Oncotarget, 7, 2016
5JDR
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Structure of PD-L1
Descriptor: Programmed cell death 1 ligand 1
Authors:Zhou, A, Wei, H.
Deposit date:2016-04-17
Release date:2017-04-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of a novel PD-L1 nanobody for immune checkpoint blockade.
Cell Discov, 3, 2017
5JDS
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Crystal structure of PD-L1 complexed with a nanobody at 1.7 Angstron resolution
Descriptor: CHLORIDE ION, Nanobody, Programmed cell death 1 ligand 1, ...
Authors:Zhou, A, Wei, H.
Deposit date:2016-04-17
Release date:2017-04-12
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of a novel PD-L1 nanobody for immune checkpoint blockade.
Cell Discov, 3, 2017
5JIF
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BU of 5jif by Molmil
Crystal structure of mouse hepatitis virus strain DVIM Hemagglutinin-Esterase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Zeng, Q.H, Bakkers, M.J.G, Feitsma, L.J, de Groot, R.J, Huizinga, E.G.
Deposit date:2016-04-22
Release date:2016-05-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Coronavirus receptor switch explained from the stereochemistry of protein-carbohydrate interactions and a single mutation.
Proc.Natl.Acad.Sci.USA, 113, 2016
4QLC
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Crystal structure of chromatosome at 3.5 angstrom resolution
Descriptor: CITRIC ACID, DNA (167-mer), H5, ...
Authors:Jiang, J.S, Zhou, B.R, Xiao, T.S, Bai, Y.W.
Deposit date:2014-06-11
Release date:2015-07-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.503 Å)
Cite:Structural Mechanisms of Nucleosome Recognition by Linker Histones.
Mol.Cell, 33 Suppl 1, 2015
5JDB
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Binding specificity of P[8] VP8* proteins of rotavirus vaccine strains with histo-blood group antigens
Descriptor: Outer capsid protein VP4
Authors:Sun, X, Guo, N, Li, D, Zhou, Y, Jin, M, Xie, G, Pang, L, Zhang, Q, Cao, Y, Duan, Z.
Deposit date:2016-04-16
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Binding specificity of P[8] VP8* proteins of rotavirus vaccine strains with histo-blood group antigens.
Virology, 495, 2016
4Q74
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F241A Fc
Descriptor: Ig gamma-1 chain C region, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Ahmed, A.A, Giddens, J, Pincetic, A, Lomino, J.V, Ravetch, J.V, Wang, L.X, Bjorkman, P.J.
Deposit date:2014-04-24
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structural characterization of anti-inflammatory immunoglobulin g fc proteins.
J.Mol.Biol., 426, 2014
4PVZ
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Structure of yeast importin a bound to the membrane protein Nuclear Localization Signal sequence of INM protein Heh2
Descriptor: Importin subunit alpha, Inner nuclear membrane protein HEH2
Authors:Lokareddy, R.K, Hapsari, A.R, van Rheenen, M, Bhardwaj, A, Veenhoff, L.M, Cingolani, C.
Deposit date:2014-03-18
Release date:2015-08-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Distinctive Properties of the Nuclear Localization Signals of Inner Nuclear Membrane Proteins Heh1 and Heh2.
Structure, 23, 2015
5JIH
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Crystal structure of HER2 binding IgG1-Fc (Fcab STAB19)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region
Authors:Humm, A, Lobner, E, Mlynek, G, Obinger, C, Djinovic-Carugo, K.
Deposit date:2016-04-22
Release date:2017-04-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.663 Å)
Cite:Fcab-HER2 Interaction: a Menage a Trois. Lessons from X-Ray and Solution Studies.
Structure, 25, 2017
5JIW
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BU of 5jiw by Molmil
Crystal structure of Thermus aquaticus amylomaltase (GH77) in complex with a 34-meric cycloamylose
Descriptor: 1,2-ETHANEDIOL, 4-alpha-glucanotransferase, CARBONATE ION, ...
Authors:Roth, C, Bexten, N, Weizenmann, N, Saenger, T, Maier, T, Zimmermann, W, Straeter, N.
Deposit date:2016-04-22
Release date:2017-01-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Amylose recognition and ring-size determination of amylomaltase.
Sci Adv, 3, 2017
4Q4B
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BU of 4q4b by Molmil
Crystal structure of LIMP-2 (space group C2221)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lysosome membrane protein 2, ...
Authors:Zhao, Y, Ren, J, Padilla-Parra, S, Fry, L.E, Stuart, D.I.
Deposit date:2014-04-14
Release date:2014-07-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Lysosome sorting of beta-glucocerebrosidase by LIMP-2 is targeted by the mannose 6-phosphate receptor.
Nat Commun, 5, 2014
4Q7D
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BU of 4q7d by Molmil
Wild type Fc (wtFc)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region
Authors:Ahmed, A.A, Giddens, J, Pincetic, A, Lomino, J.V, Ravetch, J.V, Wang, L.X, Bjorkman, P.J.
Deposit date:2014-04-24
Release date:2014-07-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural characterization of anti-inflammatory immunoglobulin g fc proteins.
J.Mol.Biol., 426, 2014
4QL0
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BU of 4ql0 by Molmil
Crystal Structure Analysis of the Membrane Transporter FhaC (double mutant V169T, I176N)
Descriptor: DI(HYDROXYETHYL)ETHER, Filamentous hemagglutinin transporter protein FhaC, HEXAETHYLENE GLYCOL, ...
Authors:Maier, T, Clantin, B, Gruss, F, Dewitte, F, Delattre, A.S, Jacob-Dubuisson, F, Hiller, S, Villeret, V.
Deposit date:2014-06-10
Release date:2015-06-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Conserved Omp85 lid-lock structure and substrate recognition in FhaC
Nat Commun, 6, 2015
4QGT
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BU of 4qgt by Molmil
The Crystal Structure of Human IgG Fc Domain with Enhanced Aromatic Sequon
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Kong, L, Connelly, S.C, Wilson, I.A.
Deposit date:2014-05-25
Release date:2015-04-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Stabilizing the CH2 Domain of an Antibody by Engineering in an Enhanced Aromatic Sequon.
Acs Chem.Biol., 11, 2016
4QKY
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BU of 4qky by Molmil
Crystal Structure Analysis of the Membrane Transporter FhaC
Descriptor: Filamentous hemagglutinin transporter protein FhaC, PHOSPHATE ION
Authors:Maier, T, Clantin, B, Gruss, F, Dewitte, F, Delattre, A.S, Jacob-Dubuisson, F, Hiller, S, Villeret, V.
Deposit date:2014-06-10
Release date:2014-10-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Conserved Omp85 lid-lock structure and substrate recognition in FhaC
Nat Commun, 6, 2015
7F59
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BU of 7f59 by Molmil
DNQX-bound GluK2-1xNeto2 complex
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor ionotropic, ...
Authors:He, L.L, Gao, Y.W, Li, B, Zhao, Y.
Deposit date:2021-06-21
Release date:2021-09-29
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Kainate receptor modulation by NETO2.
Nature, 599, 2021
7F56
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DNQX-bound GluK2-1xNeto2 complex, with asymmetric LBD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor ionotropic, kainate 2, ...
Authors:He, L.L, Gao, Y.W, Li, B, Zhao, Y.
Deposit date:2021-06-21
Release date:2021-09-29
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Kainate receptor modulation by NETO2.
Nature, 599, 2021
7F57
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Kainate-bound GluK2-1xNeto2 complex, at the desensitized state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor ionotropic, kainate 2, ...
Authors:He, L.L, Gao, Y.W, Li, B, Zhao, Y.
Deposit date:2021-06-21
Release date:2021-09-29
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Kainate receptor modulation by NETO2.
Nature, 599, 2021
7F5B
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BU of 7f5b by Molmil
LBD-TMD focused reconstruction of DNQX-bound GluK2-1xNeto2 complex
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:He, L.L, Gao, Y.W, Li, B, Zhao, Y.
Deposit date:2021-06-21
Release date:2021-09-29
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Kainate receptor modulation by NETO2.
Nature, 599, 2021
7F5A
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BU of 7f5a by Molmil
DNQX-bound GluK2-2xNeto2 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor ionotropic, kainate 2, ...
Authors:He, L.L, Gao, Y.W, Li, B, Zhao, Y.
Deposit date:2021-06-21
Release date:2021-09-29
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Kainate receptor modulation by NETO2.
Nature, 599, 2021
6Z7P
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BU of 6z7p by Molmil
Composite model of the Caulobacter crescentus S-layer bound to the O-antigen of lipopolysaccharide
Descriptor: 4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose, CALCIUM ION, S-layer protein
Authors:Bharat, T.A.M, von Kugelgen, A.
Deposit date:2020-06-01
Release date:2020-07-15
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:In Situ Structure of an Intact Lipopolysaccharide-Bound Bacterial Surface Layer.
Cell, 180, 2020
6YT7
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BU of 6yt7 by Molmil
GLYCOSYLATED KNOB/DUMMY-HOLE FC FRAGMENT
Descriptor: Ig gamma-1 chain C region, Immunoglobulin gamma-1 heavy chain, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Kuglstatter, A, Leibrock, L, Benz, J.
Deposit date:2020-04-24
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Format chain exchange (FORCE) for high-throughput generation of bispecific antibodies in combinatorial binder-format matrices.
Nat Commun, 11, 2020
6YTB
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BU of 6ytb by Molmil
GLYCOSYLATED KNOB/DUMMY-HOLE/DUMMY FC FRAGMENT
Descriptor: Immunoglobulin gamma-1 heavy chain, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Kuglstatter, A, Leibrock, L, Benz, J.
Deposit date:2020-04-24
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Format chain exchange (FORCE) for high-throughput generation of bispecific antibodies in combinatorial binder-format matrices.
Nat Commun, 11, 2020
7ESV
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BU of 7esv by Molmil
Structure and mutation analysis of the hexameric P4 from Pseudomonas aeruginosa phage phiYY
Descriptor: D(-)-TARTARIC ACID, Packaging NTPase
Authors:Zhang, C.Y, Jin, T.C.
Deposit date:2021-05-11
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structure and mutation analysis of the hexameric P4 from Pseudomonas aeruginosa phage phiYY.
Int.J.Biol.Macromol., 194, 2022

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