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8I9X
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BU of 8i9x by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1
Descriptor: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8I9T
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BU of 8i9t by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1
Descriptor: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8I9Z
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BU of 8i9z by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4
Descriptor: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8I9R
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BU of 8i9r by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP
Descriptor: 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, 60S ribosomal protein L16-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8I9V
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BU of 8i9v by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2
Descriptor: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8IA0
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BU of 8ia0 by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6
Descriptor: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8I9W
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BU of 8i9w by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3
Descriptor: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8I9Y
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BU of 8i9y by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2
Descriptor: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8IDF
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BU of 8idf by Molmil
Crystal structure of human TUT1 complexed with U6 snRNA
Descriptor: RNA (53-MER), Speckle targeted PIP5K1A-regulated poly(A) polymerase, ZINC ION
Authors:Yamashita, S, Tomita, K.
Deposit date:2023-02-13
Release date:2023-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Mechanism of U6 snRNA oligouridylation by human TUT1.
Nat Commun, 14, 2023
8INF
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BU of 8inf by Molmil
human nuclear pre-60S ribosomal particle - State F'
Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Zhang, Y, Gao, N.
Deposit date:2023-03-09
Release date:2023-08-09
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
Cell Res., 33, 2023
8INE
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BU of 8ine by Molmil
human nuclear pre-60S ribosomal particle - State G'
Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Zhang, Y, Gao, N.
Deposit date:2023-03-09
Release date:2023-08-09
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
Cell Res., 33, 2023
8IR3
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BU of 8ir3 by Molmil
human nuclear pre-60S ribosomal particle - State B'
Descriptor: 28S rRNA, 5.8S rRNA, 5S RNA, ...
Authors:Zhang, Y, Gao, N.
Deposit date:2023-03-17
Release date:2023-08-09
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
Cell Res., 33, 2023
8IPY
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BU of 8ipy by Molmil
human nuclear pre-60S ribosomal particle - State D'
Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Zhang, Y, Gao, N.
Deposit date:2023-03-15
Release date:2023-08-09
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
Cell Res., 33, 2023
8IPX
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BU of 8ipx by Molmil
human nuclear pre-60S ribosomal particle - State C'
Descriptor: 28S rRNA, 5.8S rRNA, 5S RNA, ...
Authors:Zhang, Y, Gao, N.
Deposit date:2023-03-15
Release date:2023-08-09
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
Cell Res., 33, 2023
8W2O
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BU of 8w2o by Molmil
Yeast U1 snRNP with humanized U1C Zinc-Finger domain
Descriptor: 56 kDa U1 small nuclear ribonucleoprotein component, ACT1 pre-mRNA, Pre-mRNA-processing factor 39, ...
Authors:Shi, S.S, Kuang, Z.L, Zhao, R.
Deposit date:2024-02-20
Release date:2024-05-15
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Selected humanization of yeast U1 snRNP leads to global suppression of pre-mRNA splicing and mitochondrial dysfunction in the budding yeast.
Rna, 30, 2024
8Y7E
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BU of 8y7e by Molmil
Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U12 snRNP part
Descriptor: PHD finger-like domain-containing protein 5A, Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, ...
Authors:Bai, R, Yuan, M, Zhang, P, Luo, T, Shi, Y, Wan, R.
Deposit date:2024-02-04
Release date:2024-03-13
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.66 Å)
Cite:Structural basis of U12-type intron engagement by the fully assembled human minor spliceosome.
Science, 383, 2024
8XXM
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BU of 8xxm by Molmil
Cryo-EM structure of the human 40S ribosome with PDCD4 and eIF3G
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Ye, X, Huang, Z, Li, Y, Wang, M, Cheng, J.
Deposit date:2024-01-18
Release date:2024-05-01
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Human tumor suppressor PDCD4 directly interacts with ribosomes to repress translation.
Cell Res., 34, 2024
8XXN
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BU of 8xxn by Molmil
Cryo-EM structure of the human 43S ribosome with PDCD4
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Ye, X, Huang, Z, Li, Y, Wang, M, Cheng, J.
Deposit date:2024-01-18
Release date:2024-05-01
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Human tumor suppressor PDCD4 directly interacts with ribosomes to repress translation.
Cell Res., 34, 2024
8W8E
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BU of 8w8e by Molmil
human co-transcriptional RNA capping enzyme RNGTT
Descriptor: DNA (36-MER), DNA (45-MER), DNA-directed RNA polymerase II subunit E, ...
Authors:Li, Y, Wang, Q, Xu, Y, Li, Z.
Deposit date:2023-09-02
Release date:2024-04-10
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structures of co-transcriptional RNA capping enzymes on paused transcription complex.
Nat Commun, 15, 2024
8V84
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BU of 8v84 by Molmil
60S ribosome biogenesis intermediate (Dbp10 catalytic structure - Overall map)
Descriptor: 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
Authors:Cruz, V.E, Weirich, C.S, Peddada, N, Erzberger, J.P.
Deposit date:2023-12-04
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:The DEAD-box ATPase Dbp10/DDX54 initiates peptidyl transferase center formation during 60S ribosome biogenesis.
Nat Commun, 15, 2024
8V83
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BU of 8v83 by Molmil
60S ribosome biogenesis intermediate (Dbp10 pre-catalytic structure - Overall map)
Descriptor: 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
Authors:Cruz, V.E, Weirich, C.S, Peddada, N, Erzberger, J.P.
Deposit date:2023-12-04
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:The DEAD-box ATPase Dbp10/DDX54 initiates peptidyl transferase center formation during 60S ribosome biogenesis.
Nat Commun, 15, 2024
8V87
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BU of 8v87 by Molmil
60S ribosome biogenesis intermediate (Dbp10 post-catalytic structure - Overall map)
Descriptor: 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 25S ribosomal RNA, 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase, ...
Authors:Cruz, V.E, Weirich, C.S, Peddada, N, Erzberger, J.P.
Deposit date:2023-12-04
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:The DEAD-box ATPase Dbp10/DDX54 initiates peptidyl transferase center formation during 60S ribosome biogenesis.
Nat Commun, 15, 2024
2M0G
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BU of 2m0g by Molmil
Structure, phosphorylation and U2AF65 binding of the Nterminal Domain of splicing factor 1 during 3 splice site Recognition
Descriptor: Splicing factor 1, Splicing factor U2AF 65 kDa subunit
Authors:Madl, T, Sattler, M, Zhang, Y, Bagdiul, I, Kern, T, Kang, H, Zou, P, Maeusbacher, N, Sieber, S.A, Kraemer, A.
Deposit date:2012-10-25
Release date:2013-01-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure, phosphorylation and U2AF65 binding of the N-terminal domain of splicing factor 1 during 3'-splice site recognition.
Nucleic Acids Res., 41, 2013
2M88
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BU of 2m88 by Molmil
NMR structure of a two-domain RNA-binding fragment of Nrd1
Descriptor: Protein NRD1
Authors:Bacikova, V, Pasulka, J, Kubicek, K, Stefl, R.
Deposit date:2013-05-08
Release date:2014-05-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and semi-sequence-specific RNA binding of Nrd1.
Nucleic Acids Res., 42, 2014
2MJU
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BU of 2mju by Molmil
Solution structure of a C terminal fragment of the neuronal isoform of the polypyrimidine tract binding protein (nPTB)
Descriptor: Polypyrimidine tract-binding protein 2
Authors:Esteve, V, Blatter, M, Allain, F.H.-T.
Deposit date:2014-01-16
Release date:2014-02-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution and crystal structures of a C-terminal fragment of the neuronal isoform of the polypyrimidine tract binding protein (nPTB).
PeerJ, 2, 2014

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PDB entries from 2024-09-18

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