PDB: 2561 resultsInfo pagesStatus searchChemie searchBIRD

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1DV2	The structure of biotin carboxylase, mutant E288K, complexed with ATP Descriptor: ADENOSINE-5'-TRIPHOSPHATE, BIOTIN CARBOXYLASE Authors: Thoden, J.B, Blanchard, C.Z, Holden, H.M, Waldrop, G.L. Deposit date: 2000-01-19 Release date: 2000-06-09 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Movement of the biotin carboxylase B-domain as a result of ATP binding. J.Biol.Chem., 275, 2000
7MO6	Guanosine Monophosphate Synthase from Aspergillus fumigatus Af293 Descriptor: GMP synthase [glutamine-hydrolyzing] Authors: Nguyen, S, Bruning, J.B. Deposit date: 2021-05-01 Release date: 2022-02-16 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural insights into the antifungal drug target guanosine monophosphate synthase from Aspergillus fumigatus. Acta Crystallogr D Struct Biol, 78, 2022
3GDE	The closed conformation of ATP-dependent DNA ligase from Archaeoglobus fulgidus Descriptor: DNA ligase, PHOSPHATE ION Authors: Kim, D.J, Kim, H.-W, Kim, O, Kim, H.S, Lee, S.J, Suh, S.W. Deposit date: 2009-02-24 Release date: 2009-12-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.3 Å) Cite: ATP-dependent DNA ligase from Archaeoglobus fulgidus displays a tightly closed conformation Acta Crystallogr.,Sect.F, 65, 2009
6QCL	Citryl-CoA lyase core module of Chlorobium limicola ATP citrate lyase in complex with acetyl-CoA and L-malate Descriptor: (2S)-2-hydroxybutanedioic acid, ACETYL COENZYME *A, ATP-citrate lyase alpha-subunit, ... Authors: Verstraete, K, Verschueren, K. Deposit date: 2018-12-28 Release date: 2019-04-10 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structure of ATP citrate lyase and the origin of citrate synthase in the Krebs cycle. Nature, 568, 2019
6Y87	Crystal Structure of the Homospermidine Synthase (HSS) from Pseudomonas aeruginosa in Complex with NAD and PUT Descriptor: 1,4-DIAMINOBUTANE, Homospermidine synthase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE Authors: Helfrich, F, Scheidig, A.J. Deposit date: 2020-03-03 Release date: 2021-03-31 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Structural and catalytic characterization of Blastochloris viridis and Pseudomonas aeruginosa homospermidine synthases supports the essential role of cation-pi interaction. Acta Crystallogr D Struct Biol, 77, 2021
1YID	Crystal structure of tryptophanyl tRNA synthetase II from Deinococcus radiodurans in complex with ATP. Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, tryptophanyl-tRNA synthetase Authors: Buddha, M.R, Crane, B.R. Deposit date: 2005-01-11 Release date: 2005-08-02 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structures of tryptophanyl-tRNA synthetase II from Deinococcus radiodurans bound to ATP and tryptophan. Insight into subunit cooperativity and domain motions linked to catalysis J.Biol.Chem., 280, 2005
3M0N	Plasmodium vivax 6-pyruvoyltetrahydropterin synthase (PTPS), E37A catalytic residue mutant Descriptor: PTERINE, Putative 6-pyruvoyl tetrahydrobiopterin synthase, ZINC ION Authors: Larson, E.T, Merritt, E.A, Medical Structural Genomics of Pathogenic Protozoa (MSGPP) Deposit date: 2010-03-03 Release date: 2010-04-07 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural analysis of the dual-functional 6-pyruvoyltetrahydropterin synthase from Malaria parasites. to be published
3LZE	Plasmodium vivax 6-pyruvoyltetrahydropterin synthase (PTPS), E37C catalytic residue mutant Descriptor: PTERINE, Putative 6-pyruvoyl tetrahydrobiopterin synthase, ZINC ION Authors: Larson, E.T, Merritt, E.A, Medical Structural Genomics of Pathogenic Protozoa (MSGPP) Deposit date: 2010-03-01 Release date: 2010-04-07 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural analysis of the dual-functional 6-pyruvoyltetrahydropterin synthase from Malaria parasites. to be published
2OBM	Structural and biochemical analysis of a prototypical ATPase from the type III secretion system of pathogenic bacteria Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, EscN Authors: Zarivach, R, Vuckovic, M, Deng, W, Finlay, B.B, Strynadka, N.C.J. Deposit date: 2006-12-19 Release date: 2007-01-30 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Structural analysis of a prototypical ATPase from the type III secretion system. Nat.Struct.Mol.Biol., 14, 2007
3LX3	Plasmodium vivax 6-pyruvoyltetrahydropterin synthase (PTPS) in complex with xanthopterin Descriptor: 2-amino-1,5-dihydropteridine-4,6-dione, 6-pyruvoyl tetrahydrobiopterin synthase, ZINC ION Authors: Larson, E.T, Merritt, E.A, Medical Structural Genomics of Pathogenic Protozoa (MSGPP) Deposit date: 2010-02-24 Release date: 2010-03-09 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Structural analysis of the dual-functional 6-pyruvoyltetrahydropterin synthase from Malaria parasites. to be published
3MW8	Crystal structure of an UROPORPHYRINOGEN-III SYNTHASE (Sama_3255) from SHEWANELLA AMAZONENSIS SB2B at 1.65 A resolution Descriptor: 1,2-ETHANEDIOL, Uroporphyrinogen-III synthase Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2010-05-05 Release date: 2010-05-19 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Crystal structure of an UROPORPHYRINOGEN-III SYNTHASE (Sama_3255) from SHEWANELLA AMAZONENSIS SB2B at 1.65 A resolution To be published
3TSY	4-Coumaroyl-CoA Ligase::Stilbene Synthase fusion protein Descriptor: Fusion Protein 4-coumarate--CoA ligase 1, Resveratrol synthase Authors: Yi, H, Jez, J.M. Deposit date: 2011-09-13 Release date: 2011-12-14 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structural and Kinetic Analysis of the Unnatural Fusion Protein 4-Coumaroyl-CoA Ligase::Stilbene Synthase. J.Am.Chem.Soc., 133, 2011
7RMC	Yeast CTP Synthase (Ura7) filament bound to CTP at low pH Descriptor: CTP synthase 1, CYTIDINE-5'-TRIPHOSPHATE Authors: Hansen, J.M, Lynch, E.M, Farrell, D.P, DiMaio, F, Quispe, J, Kollman, J.M. Deposit date: 2021-07-27 Release date: 2021-11-24 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Cryo-EM structures of CTP synthase filaments reveal mechanism of pH-sensitive assembly during budding yeast starvation. Elife, 10, 2021
7AT1	CRYSTAL STRUCTURES OF ASPARTATE CARBAMOYLTRANSFERASE LIGATED WITH PHOSPHONOACETAMIDE, MALONATE, AND CTP OR ATP AT 2.8-ANGSTROMS RESOLUTION AND NEUTRAL P*H Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ASPARTATE CARBAMOYLTRANSFERASE (R STATE), CATALYTIC CHAIN, ... Authors: Gouaux, J.E, Stevens, R.C, Lipscomb, W.N. Deposit date: 1989-09-22 Release date: 1990-10-15 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Crystal structures of aspartate carbamoyltransferase ligated with phosphonoacetamide, malonate, and CTP or ATP at 2.8-A resolution and neutral pH. Biochemistry, 29, 1990
3PFF	Truncated human atp-citrate lyase with ADP and tartrate bound Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-citrate synthase, L(+)-TARTARIC ACID, ... Authors: Fraser, M.E, Sun, T. Deposit date: 2010-10-28 Release date: 2011-10-12 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.3 Å) Cite: ADP-Mg2+ bound to the ATP-grasp domain of ATP-citrate lyase. Acta Crystallogr.,Sect.F, 67, 2011
8G2P	Structure of Ternary Complex of cGAS with dsDNA and Bound ATP and GTP Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, GUANOSINE-5'-TRIPHOSPHATE, ... Authors: Wu, S, Sohn, J. Deposit date: 2023-02-06 Release date: 2024-06-19 Method: X-RAY DIFFRACTION (2.521 Å) Cite: Structure of Ternary Complex of cGAS with dsDNA and Bound ATP and GTP To Be Published
3UJN	Formyl Glycinamide Ribonucleotide Amidotransferase from Salmonella Typhimurium : Role of the ATP complexation and glutaminase domain in catalytic coupling Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Phosphoribosylformylglycinamidine synthase, ... Authors: Anand, R, Morar, M, Tanwar, A.S, Panjikar, S. Deposit date: 2011-11-08 Release date: 2012-06-06 Last modified: 2013-09-11 Method: X-RAY DIFFRACTION (2.98 Å) Cite: Formylglycinamide ribonucleotide amidotransferase from Salmonella typhimurium: role of ATP complexation and the glutaminase domain in catalytic coupling Acta Crystallogr.,Sect.D, 68, 2012
3UMM	Formylglycinamide ribonucleotide amidotransferase from Salmonella typhimurium: Role of the ATP complexation and glutaminase domain in catalytic coupling Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... Authors: Anand, R, Morar, M, Tanwar, A.S, Panjikar, S. Deposit date: 2011-11-14 Release date: 2012-06-06 Last modified: 2013-09-11 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Formylglycinamide ribonucleotide amidotransferase from Salmonella typhimurium: role of ATP complexation and the glutaminase domain in catalytic coupling Acta Crystallogr.,Sect.D, 68, 2012
4K8V	Structure of cyclic GMP-AMP Synthase (cGAS) Descriptor: Cyclic GMP-AMP synthase, ZINC ION Authors: Gao, P, Wu, Y, Patel, D.J. Deposit date: 2013-04-18 Release date: 2013-05-15 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2 Å) Cite: Cyclic [G(2',5')pA(3',5')p] is the metazoan second messenger produced by DNA-activated cyclic GMP-AMP synthase. Cell(Cambridge,Mass.), 153, 2013
4AT1	STRUCTURAL CONSEQUENCES OF EFFECTOR BINDING TO THE T STATE OF ASPARTATE CARBAMOYLTRANSFERASE. CRYSTAL STRUCTURES OF THE UNLIGATED AND ATP-, AND CTP-COMPLEXED ENZYMES AT 2.6-ANGSTROMS RESOLUTION Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ASPARTATE CARBAMOYLTRANSFERASE (T STATE), CATALYTIC CHAIN, ... Authors: Stevens, R.C, Gouaux, J.E, Lipscomb, W.N. Deposit date: 1990-04-26 Release date: 1990-10-15 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural consequences of effector binding to the T state of aspartate carbamoyltransferase: crystal structures of the unligated and ATP- and CTP-complexed enzymes at 2.6-A resolution. Biochemistry, 29, 1990
6ABW	Crystal structure of citrate synthase (Msed_0281) from Metallosphaera sedula in complex with acetyl-CoA Descriptor: ACETYL COENZYME *A, Citrate synthase, GLYCEROL Authors: Lee, S.-H, Kim, K.-J. Deposit date: 2018-07-24 Release date: 2019-01-16 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.72 Å) Cite: Crystal structure and biochemical properties of msed_0281, the citrate synthase from Metallosphaera sedula. Biochem. Biophys. Res. Commun., 509, 2019
6ABV	Crystal structure of citrate synthase (Msed_0281) from Metallosphaera sedula Descriptor: Citrate synthase, GLYCEROL Authors: Lee, S.-H, Kim, K.-J. Deposit date: 2018-07-24 Release date: 2019-01-16 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure and biochemical properties of msed_0281, the citrate synthase from Metallosphaera sedula. Biochem. Biophys. Res. Commun., 509, 2019
3UGJ	Formyl Glycinamide ribonucletide amidotransferase from Salmonella Typhimurum: Role of the ATP complexation and glutaminase domain in catalytic coupling Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Phosphoribosylformylglycinamidine synthase, ... Authors: Morar, M, Tanwar, A.S, Panjikar, S, Anand, R. Deposit date: 2011-11-02 Release date: 2012-06-06 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Formylglycinamide ribonucleotide amidotransferase from Salmonella typhimurium: role of ATP complexation and the glutaminase domain in catalytic coupling Acta Crystallogr.,Sect.D, 68, 2012
5VDU	Human cyclic GMP-AMP synthase (cGAS) in complex with Compound F2 Descriptor: 2-(pyridin-2-yl)pyrimidine, Cyclic GMP-AMP synthase, ZINC ION Authors: Byrnes, L.J, Hall, J.D. Deposit date: 2017-04-03 Release date: 2017-09-27 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.729 Å) Cite: The catalytic mechanism of cyclic GMP-AMP synthase (cGAS) and implications for innate immunity and inhibition. Protein Sci., 26, 2017
5VDV	Human cyclic GMP-AMP synthase (cGAS) in complex with Compound F3 Descriptor: Cyclic GMP-AMP synthase, SULFATE ION, ZINC ION, ... Authors: Byrnes, L.J, Hall, J.D. Deposit date: 2017-04-03 Release date: 2017-09-27 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.998 Å) Cite: The catalytic mechanism of cyclic GMP-AMP synthase (cGAS) and implications for innate immunity and inhibition. Protein Sci., 26, 2017

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