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3KMT
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BU of 3kmt by Molmil
Crystal structure of vSET/SAH/H3 ternary complex
Descriptor: A612L protein, Histone H3, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Wei, H, Zhou, M.M.
Deposit date:2009-11-11
Release date:2010-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Dimerization of a viral SET protein endows its function.
Proc.Natl.Acad.Sci.USA, 107, 2010
3NDK
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BU of 3ndk by Molmil
RB69 DNA Polymerase (Y567A) Ternary Complex with dCTP Opposite dG
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*(DOC))-3'), ...
Authors:Wang, M, Wang, J, Konigsberg, W.H.
Deposit date:2010-06-07
Release date:2011-01-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Variation in Mutation Rates Caused by RB69pol Fidelity Mutants Can Be Rationalized on the Basis of Their Kinetic Behavior and Crystal Structures.
J.Mol.Biol., 406, 2011
3NE6
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BU of 3ne6 by Molmil
RB69 DNA Polymerase (S565G/Y567A) Ternary Complex with dCTP Opposite dG
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*(DOC))-3'), ...
Authors:Wang, M, Wang, J, Konigsberg, W.H.
Deposit date:2010-06-08
Release date:2011-01-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Variation in Mutation Rates Caused by RB69pol Fidelity Mutants Can Be Rationalized on the Basis of Their Kinetic Behavior and Crystal Structures.
J.Mol.Biol., 406, 2011
4DWW
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BU of 4dww by Molmil
Crystal Structure of Nattokinase from Bacillus subtilis natto
Descriptor: CALCIUM ION, Subtilisin NAT
Authors:Chatake, T, Yanagisawa, Y.
Deposit date:2012-02-27
Release date:2012-03-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Purification, crystallization and preliminary X-ray diffraction experiment of nattokinase from Bacillus subtilis natto
Acta Crystallogr.,Sect.F, 66, 2010
4DXD
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BU of 4dxd by Molmil
Staphylococcal Aureus FtsZ in complex with 723
Descriptor: 3-[(6-chloro[1,3]thiazolo[5,4-b]pyridin-2-yl)methoxy]-2,6-difluorobenzamide, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
Authors:Lu, J, Soisson, S.M.
Deposit date:2012-02-27
Release date:2012-05-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Restoring methicillin-resistant Staphylococcus aureus susceptibility to beta-lactam antibiotics.
Sci Transl Med, 4, 2012
4LTA
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BU of 4lta by Molmil
The crystal structure of the P132R, Y133G mutant of Pyrococcus furiosus phosphoglucose isomerase in complex with manganese and 5-phospho-D-arabinonate.
Descriptor: 1,2-ETHANEDIOL, 5-PHOSPHOARABINONIC ACID, Glucose-6-phosphate isomerase, ...
Authors:Baker, P.J, Almourfi, F.M.
Deposit date:2013-07-23
Release date:2014-07-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Correlated mutation analysis as a tool for smart library design to improve protein performance.
To be Published
4DU4
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BU of 4du4 by Molmil
RB69 DNA Polymerase Ternary Complex with dATP Opposite dT with 3-Deaza-adenine at the N-3 Position of Primer Strand
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-02-21
Release date:2012-05-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Probing minor groove hydrogen bonding interactions between RB69 DNA polymerase and DNA.
Biochemistry, 51, 2012
4LST
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BU of 4lst by Molmil
Crystal structure of broadly and potently neutralizing antibody VRC01 in complex with HIV-1 clade C strain ZM176.66 gp120
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ENVELOPE GLYCOPROTEIN GP120 of HIV-1 clade C, HEAVY CHAIN OF ANTIBODY VRC01, ...
Authors:Zhou, T, Moquin, S, Kwong, P.D.
Deposit date:2013-07-23
Release date:2013-08-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Multidonor Analysis Reveals Structural Elements, Genetic Determinants, and Maturation Pathway for HIV-1 Neutralization by VRC01-Class Antibodies.
Immunity, 39, 2013
4DU1
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BU of 4du1 by Molmil
RB69 DNA Polymerase Ternary Complex with dATP Opposite dT
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-02-21
Release date:2012-05-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Probing minor groove hydrogen bonding interactions between RB69 DNA polymerase and DNA.
Biochemistry, 51, 2012
4DUW
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BU of 4duw by Molmil
E. coli (lacZ) beta-galactosidase (G974A) in complex with allolactose
Descriptor: Beta-galactosidase, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
Authors:Wheatley, R.W, Lo, S, Janzcewicz, L.J, Dugdale, M.L, Huber, R.E.
Deposit date:2012-02-22
Release date:2013-03-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Explanation for Allolactose (lac operon inducer) Synthesis by lacZ beta-Galactosidase and the Evolutionary Relationship between Allolactose synthesis and the lac Repressor
J.Biol.Chem., 288, 2013
6CE9
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BU of 6ce9 by Molmil
Insulin Receptor ectodomain in complex with two insulin molecules
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Scapin, G, Dandey, V.P, Zhang, Z, Strickland, C, Potter, C.S, Carragher, B.
Deposit date:2018-02-11
Release date:2018-03-14
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure of the insulin receptor-insulin complex by single-particle cryo-EM analysis.
Nature, 556, 2018
4MQ2
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BU of 4mq2 by Molmil
The crystal structure of DYRK1a with a bound pyrido[2,3-d]pyrimidine inhibitor
Descriptor: Dual specificity tyrosine-phosphorylation-regulated kinase 1A, PENTAETHYLENE GLYCOL, SULFATE ION, ...
Authors:Lukacs, C.M, Janson, C.A, Garvie, C, Liang, L.
Deposit date:2013-09-15
Release date:2013-12-11
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Pyrido[2,3-d]pyrimidines: Discovery and preliminary SAR of a novel series of DYRK1B and DYRK1A inhibitors.
Bioorg.Med.Chem.Lett., 23, 2013
2BUS
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BU of 2bus by Molmil
SOLUTION CONFORMATION OF PROTEINASE INHIBITOR IIA FROM BULL SEMINAL PLASMA BY 1H NUCLEAR MAGNETIC RESONANCE AND DISTANCE GEOMETRY
Descriptor: PROTEINASE INHIBITOR IIA
Authors:Guntert, P, Williamson, M.P, Havel, T.F, Wuthrich, K.
Deposit date:1990-05-14
Release date:1991-04-15
Last modified:2019-12-25
Method:SOLUTION NMR
Cite:Solution conformation of proteinase inhibitor IIA from bull seminal plasma by 1H nuclear magnetic resonance and distance geometry.
J.Mol.Biol., 182, 1985
1APO
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BU of 1apo by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE APO FORM OF THE N-TERMINAL EGF-LIKE MODULE OF BLOOD COAGULATION FACTOR X AS DETERMINED BY NMR SPECTROSCOPY AND SIMULATED FOLDING
Descriptor: EGF-LIKE MODULE OF BLOOD COAGULATION FACTOR X, HYDROXIDE ION
Authors:Ullner, M, Selander, M, Persson, E, Stenflo, J, Drakenberg, T, Teleman, O.
Deposit date:1992-04-21
Release date:1994-01-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Three-dimensional structure of the apo form of the N-terminal EGF-like module of blood coagulation factor X as determined by NMR spectroscopy and simulated folding.
Biochemistry, 31, 1992
6CEB
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BU of 6ceb by Molmil
Insulin Receptor ectodomain in complex with two insulin molecules - C1 symmetry
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Scapin, G, Dandey, V.P, Zhang, Z, Strickland, C, Potter, C.S, Carragher, B.
Deposit date:2018-02-11
Release date:2018-03-14
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Structure of the insulin receptor-insulin complex by single-particle cryo-EM analysis.
Nature, 556, 2018
2CCY
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BU of 2ccy by Molmil
STRUCTURE OF FERRICYTOCHROME C(PRIME) FROM RHODOSPIRILLUM MOLISCHIANUM AT 1.67 ANGSTROMS RESOLUTION
Descriptor: CYTOCHROME C, HEME C
Authors:Finzel, B.C, Weber, P.C, Hardman, K.D, Salemme, F.R.
Deposit date:1985-08-27
Release date:1986-01-21
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structure of ferricytochrome c' from Rhodospirillum molischianum at 1.67 A resolution.
J.Mol.Biol., 186, 1985
7BNR
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BU of 7bnr by Molmil
Crystal structure of a ParB Q52A mutant from Myxococcus xanthus bound to CTPyS
Descriptor: Cytosine 5'-[gamma-thio]triphosphate, GLYCEROL, MAGNESIUM ION, ...
Authors:Altegoer, F, Bange, G.
Deposit date:2021-01-22
Release date:2021-09-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The CTPase activity of ParB determines the size and dynamics of prokaryotic DNA partition complexes.
Mol.Cell, 81, 2021
7BNK
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BU of 7bnk by Molmil
Crystal structure of ParB from Myxococcus xanthus bound to CDP and Monothiophosphate
Descriptor: CYTIDINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Altegoer, F, Bange, G.
Deposit date:2021-01-22
Release date:2021-09-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The CTPase activity of ParB determines the size and dynamics of prokaryotic DNA partition complexes.
Mol.Cell, 81, 2021
8IP8
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BU of 8ip8 by Molmil
Wheat 80S ribosome stalled on AUG-Stop boron dependently
Descriptor: 18S ribosomal RNA, 40S ribosomal protein eL8, 40S ribosomal protein eS1, ...
Authors:Yokoyama, T, Tanaka, M, Saito, H, Nishimoto, M, Tsuda, K, Sotta, N, Shigematsu, H, Shirouzu, M, Iwasaki, S, Ito, T, Fujiwara, T.
Deposit date:2023-03-14
Release date:2024-02-21
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1.
Nat.Chem.Biol., 20, 2024
7E15
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BU of 7e15 by Molmil
Protein ternary complex working for DNA replication initiation
Descriptor: DNA polymerase II small subunit, Gins51, SsDNA-specific exonuclease
Authors:Oyama, T, Ishino, Y.
Deposit date:2021-01-30
Release date:2021-10-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Family D DNA polymerase interacts with GINS to promote CMG-helicase in the archaeal replisome.
Nucleic Acids Res., 50, 2022
8K2C
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BU of 8k2c by Molmil
Cryo-EM structure of the human 80S ribosome with Tigecycline
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Li, X, Wang, M, Cheng, J.
Deposit date:2023-07-12
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline.
Nat Commun, 15, 2024
6CE7
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BU of 6ce7 by Molmil
Insulin Receptor ectodomain in complex with one insulin molecule
Descriptor: Insulin A chain, Insulin B chain, Insulin receptor, ...
Authors:Scapin, G, Dandey, V.P, Zhang, Z, Strickland, C, Potter, C.S, Carragher, B.
Deposit date:2018-02-11
Release date:2018-03-14
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:Structure of the insulin receptor-insulin complex by single-particle cryo-EM analysis.
Nature, 556, 2018
8XSX
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BU of 8xsx by Molmil
Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Li, X, Wang, M, Cheng, J.
Deposit date:2024-01-10
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline.
Nat Commun, 15, 2024
8YOO
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BU of 8yoo by Molmil
Cryo-EM structure of the human 80S ribosome with 100 um Tigecycline
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Li, X, Wang, M, Denk, T, Cheng, J.
Deposit date:2024-03-13
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (2 Å)
Cite:Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline.
Nat Commun, 15, 2024
8YOP
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BU of 8yop by Molmil
Cryo-EM structure of the human 80S ribosome with 4 um Tigecycline
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Li, X, Wang, M, Denk, T, Cheng, J.
Deposit date:2024-03-13
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline.
Nat Commun, 15, 2024

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