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6LD0
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BU of 6ld0 by Molmil
Structure of Bifidobacterium dentium beta-glucuronidase complexed with C6-hexyl uronic isofagomine
Descriptor: (2~{S},3~{S},4~{R},5~{R})-2-hexyl-4,5-bis(oxidanyl)piperidine-3-carboxylic acid, LacZ1 Beta-galactosidase
Authors:Lin, H.-Y, Hsieh, T.-J, Lin, C.-H.
Deposit date:2019-11-20
Release date:2021-01-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Entropy-driven binding of gut bacterial beta-glucuronidase inhibitors ameliorates irinotecan-induced toxicity.
Commun Biol, 4, 2021
6KUZ
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BU of 6kuz by Molmil
E.coli beta-galactosidase (E537Q) in complex with fluorescent probe KSL01
Descriptor: 3-(1,3-benzothiazol-2-yl)-2-[[4-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxyphenyl]methoxy]-5-methyl-benzaldehyde, Beta-galactosidase, DIMETHYL SULFOXIDE, ...
Authors:Chen, X, Hu, Y.L, Li, X.K, Guo, Y, Li, J.
Deposit date:2019-09-03
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:First-generation species-selective chemical probes for fluorescence imaging of human senescence-associated beta-galactosidase.
Chem Sci, 11, 2020
6JZ8
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BU of 6jz8 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro 1,5-lactone
Descriptor: (2S,3S,4S,5R)-3,4,5-trihydroxy-6-oxo-oxane-2-carboxylic acid, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.583 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ7
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BU of 6jz7 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with N1-substituted uronic isofagomine
Descriptor: (3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)-1-propyl-piperidine-3-carboxylic acid, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ6
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BU of 6jz6 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with C6-substituted uronic isofagomine
Descriptor: (2~{S},3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)-2-propyl-piperidine-3-carboxylic acid, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.605 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ5
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BU of 6jz5 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with D-glucuronic acid
Descriptor: Beta-glucuronidase, beta-D-glucopyranuronic acid
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ4
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BU of 6jz4 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro-d-lactam
Descriptor: (2S,3R,4S,5R)-3,4,5-trihydroxy-6-oxopiperidine-2-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-03
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.712 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ3
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BU of 6jz3 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with uronic deoxynojirimycin
Descriptor: (2~{S},3~{R},4~{R},5~{S})-3,4,5-tris(oxidanyl)piperidine-2-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-05-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ2
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BU of 6jz2 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with uronic isofagomine at 1.3 Angstroms resolution
Descriptor: (3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ1
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BU of 6jz1 by Molmil
Apo structure of b-glucuronidase from Ruminococcus gnavus at 1.7 Angstrom resolution
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6HPD
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BU of 6hpd by Molmil
The structure of a beta-glucuronidase from glycoside hydrolase family 2
Descriptor: BROMIDE ION, Beta-galactosidase (GH2), MAGNESIUM ION
Authors:Robb, C.S, Gerlach, N, Reisky, L, Bornshoeru, U, Hehemann, J.H.
Deposit date:2018-09-20
Release date:2019-07-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:A marine bacterial enzymatic cascade degrades the algal polysaccharide ulvan.
Nat.Chem.Biol., 15, 2019
6ED2
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BU of 6ed2 by Molmil
Faecalibacterium prausnitzii beta-glucuronidase
Descriptor: FORMIC ACID, GLYCEROL, Glycosyl hydrolase family 2, ...
Authors:Pellock, S.J, Biernat, K.A, Redinbo, M.R.
Deposit date:2018-08-08
Release date:2019-02-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure, function, and inhibition of drug reactivating human gut microbial beta-glucuronidases.
Sci Rep, 9, 2019
6ED1
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BU of 6ed1 by Molmil
Bacteroides dorei Beta-glucuronidase
Descriptor: Glycosyl hydrolase family 2, sugar binding domain protein, SODIUM ION
Authors:Biernat, K.A, Redinbo, M.R.
Deposit date:2018-08-08
Release date:2019-02-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure, function, and inhibition of drug reactivating human gut microbial beta-glucuronidases.
Sci Rep, 9, 2019
6ECA
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BU of 6eca by Molmil
Lactobacillus rhamnosus Beta-glucuronidase
Descriptor: Beta-glucuronidase, CHLORIDE ION, GLYCEROL
Authors:Biernat, K.A, Pellock, S.J, Bhatt, A.P, Bivins, M.M, Walton, W.G, Tran, B.N.T, Wei, L, Snider, M.C, Cesmat, A.P, Tripathy, A, Erie, D.A, Redinbo, M.R.R.
Deposit date:2018-08-07
Release date:2019-02-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.853 Å)
Cite:Structure, function, and inhibition of drug reactivating human gut microbial beta-glucuronidases.
Sci Rep, 9, 2019
6EC6
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BU of 6ec6 by Molmil
Ruminococcus gnavus Beta-glucuronidase
Descriptor: Beta-glucuronidase, CHLORIDE ION, GLYCEROL
Authors:Biernat, K.A, Redinbo, M.R.
Deposit date:2018-08-07
Release date:2019-02-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure, function, and inhibition of drug reactivating human gut microbial beta-glucuronidases.
Sci Rep, 9, 2019
6DRV
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BU of 6drv by Molmil
Beta-galactosidase
Descriptor: Beta-galactosidase
Authors:Cianfrocco, M.A, Lahiri, I, DiMaio, F, Leschziner, A.E.
Deposit date:2018-06-13
Release date:2018-07-11
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:cryoem-cloud-tools: A software platform to deploy and manage cryo-EM jobs in the cloud.
J. Struct. Biol., 203, 2018
6D8K
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BU of 6d8k by Molmil
Bacteroides multiple species beta-glucuronidase
Descriptor: Glycosyl hydrolase family 2, sugar binding domain protein
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-26
Release date:2018-10-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6D8G
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BU of 6d8g by Molmil
D341A D367A calcium binding mutant of Bacteroides uniformis beta-glucuronidase 2
Descriptor: Glycosyl hydrolases family 2, sugar binding domain protein, SODIUM ION
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-26
Release date:2018-10-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6D89
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BU of 6d89 by Molmil
Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion
Descriptor: Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, CITRIC ACID
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-26
Release date:2018-10-17
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6D7J
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BU of 6d7j by Molmil
The Crystal Structure of Parabacteroides merdae Beta-Glucuronidase (GUS) with Glycerol in Active-Site
Descriptor: Beta-Glucuronidase, GLYCEROL, POTASSIUM ION, ...
Authors:Little, M.S, Redinbo, M.R.
Deposit date:2018-04-24
Release date:2019-05-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Active site flexibility revealed in crystal structures of Parabacteroides merdae beta-glucuronidase from the human gut microbiome.
Protein Sci., 27, 2018
6D7F
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BU of 6d7f by Molmil
Bacteroides uniformis beta-glucuronidase 1 bound to thiophenyl-beta-D-glucuronide
Descriptor: Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, GLYCEROL, ...
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-24
Release date:2018-10-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6D6W
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BU of 6d6w by Molmil
Bacteroides uniformis beta-glucuronidase 1 bound to glucuronate
Descriptor: Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, GLYCEROL, ...
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-23
Release date:2018-10-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6D50
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BU of 6d50 by Molmil
Bacteroides uniforms beta-glucuronidase 2 bound to D-glucaro-1,5-lactone
Descriptor: (2S,3S,4S,5R)-3,4,5-trihydroxy-6-oxo-oxane-2-carboxylic acid, CALCIUM ION, Glycosyl hydrolases family 2, ...
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-19
Release date:2018-10-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6D4O
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BU of 6d4o by Molmil
Eubacterium eligens beta-glucuronidase bound to an amoxapine-glucuronide conjugate
Descriptor: (5aR,9aR)-2-chloro-11-(4-beta-D-glucopyranuronosylpiperazin-1-yl)-5a,6,9,9a-tetrahydrodibenzo[b,f][1,4]oxazepine, Beta-glucuronidase, CHLORIDE ION, ...
Authors:Pellock, S.J, Walton, W.G, Redinbo, M.R.
Deposit date:2018-04-18
Release date:2018-07-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Gut Microbial beta-Glucuronidase Inhibition via Catalytic Cycle Interception.
ACS Cent Sci, 4, 2018
6D41
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BU of 6d41 by Molmil
Bacteriodes uniformis beta-glucuronidase 1 bound to D-glucaro-1,5-lactone
Descriptor: (2S,3S,4S,5R)-3,4,5-trihydroxy-6-oxo-oxane-2-carboxylic acid, Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, ...
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-17
Release date:2018-10-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018

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