PDB: 19228 resultsInfo pagesStatus searchChemie searchBIRD

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6ENJ	Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P) Descriptor: 16S ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... Authors: Huter, P, Wilson, D.N. Deposit date: 2017-10-05 Release date: 2017-11-22 Last modified: 2019-10-30 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Structural Basis for Polyproline-Mediated Ribosome Stalling and Rescue by the Translation Elongation Factor EF-P. Mol. Cell, 68, 2017
6EI3	Crystal structure of auto inhibited POT family peptide transporter Descriptor: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, Proton-dependent oligopeptide transporter family protein Authors: Newstead, S, Brinth, A, Vogeley, L, Caffrey, M. Deposit date: 2017-09-17 Release date: 2017-11-22 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Proton movement and coupling in the POT family of peptide transporters. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8J76	Human high-affinity choline transporter CHT1 in the inward-facing apo-open conformation Descriptor: High affinity choline transporter 1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose Authors: Gao, Y, Qiu, Y, Zhao, Y. Deposit date: 2023-04-27 Release date: 2024-04-10 Last modified: 2024-10-16 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Transport mechanism of presynaptic high-affinity choline uptake by CHT1. Nat.Struct.Mol.Biol., 31, 2024
6E9L	Crystal structure of Protein Kinase A in complex with the PKI peptide and a pyridinylbenzamide based inhibitor Descriptor: N-[(2,3-dihydro-1,4-benzodioxin-5-yl)methyl]-4-(pyridin-4-yl)benzamide, PKI peptide, cAMP-dependent protein kinase catalytic subunit alpha Authors: Judge, R.A, Hobson, A.D. Deposit date: 2018-08-01 Release date: 2018-11-14 Last modified: 2019-01-16 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Identification of Selective Dual ROCK1 and ROCK2 Inhibitors Using Structure Based Drug Design. J. Med. Chem., 61, 2018
4V4V	Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056 Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal subunit protein S10, ... Authors: Mitra, K, Frank, J. Deposit date: 2006-05-09 Release date: 2014-07-09 Last modified: 2024-02-28 Method: ELECTRON MICROSCOPY (15 Å) Cite: Elongation arrest by SecM via a cascade of ribosomal RNA rearrangements Mol.Cell, 22, 2006
4V6F	Elongation complex of the 70S ribosome with three tRNAs and mRNA. Descriptor: 16S ribosomal RNA, 23S RIBOSOMAL RNA, 23S RRNA, ... Authors: Jenner, L.B, Yusupova, G, Yusupov, M. Deposit date: 2009-07-09 Release date: 2014-07-09 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structural aspects of messenger RNA reading frame maintenance by the ribosome. Nat.Struct.Mol.Biol., 17, 2010
4V77	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Blau, C, Bock, L.V, Schroder, G.F, Davydov, I, Fischer, N, Stark, H, Rodnina, M.V, Vaiana, A.C, Grubmuller, H. Deposit date: 2013-10-14 Release date: 2014-07-09 Last modified: 2024-10-16 Method: ELECTRON MICROSCOPY (17 Å) Cite: Energy barriers and driving forces in tRNA translocation through the ribosome. Nat.Struct.Mol.Biol., 20, 2013
4N0M	Crystal structure of human C53A DJ-1 in complex with Cu Descriptor: 1,2-ETHANEDIOL, COPPER (II) ION, Protein DJ-1 Authors: Cendron, L, Girotto, S, Bisaglia, M, Tessari, I, Mammi, S, Zanotti, G, Bubacco, L. Deposit date: 2013-10-02 Release date: 2014-03-05 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.95 Å) Cite: DJ-1 Is a Copper Chaperone Acting on SOD1 Activation. J.Biol.Chem., 289, 2014
4V86	Structure-function Analysis of Receptor-binding in Adeno-Associated Virus Serotype 6 (AAV-6) Descriptor: Capsid protein VP1 Authors: Xie, Q. Deposit date: 2011-09-13 Release date: 2014-07-09 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (3.003 Å) Cite: Structure-function analysis of receptor-binding in adeno-associated virus serotype 6 (AAV-6). Virology, 420, 2011
4N0P	Crystal structure of a pilus assembly protein CpaE (CC_2943) from Caulobacter crescentus CB15 at 1.75 A resolution (PSI Community Target, Shapiro) Descriptor: Pilus assembly protein CpaE Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2013-10-02 Release date: 2013-11-27 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Crystal structure of a pilus assembly protein CpaE (CC_2943) from Caulobacter crescentus CB15 at 1.75 A resolution (PSI Community Target, Shapiro) To be published
4V9P	Control of ribosomal subunit rotation by elongation factor G Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Pulk, A, Cate, J.H.D. Deposit date: 2013-05-03 Release date: 2014-07-09 Last modified: 2014-12-17 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Control of ribosomal subunit rotation by elongation factor G. Science, 340, 2013
8J6L	Cryo-EM structure of thehydroxycarboxylic acid receptor 2-Gi protein complex bound niacin Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ... Authors: Yuan, Q, Zhu, S, Duan, J, Xu, H.E, Duan, X. Deposit date: 2023-04-26 Release date: 2024-04-03 Method: ELECTRON MICROSCOPY (3.05 Å) Cite: Molecular recognition of niacin and lipid-lowering drugs by the human hydroxycarboxylic acid receptor 2. Cell Rep, 42, 2023
8J74	Human high-affinity choline transporter CHT1 in the HC-3-bound outward-facing open conformation, dimeric state Descriptor: (2S,2'S)-2,2'-biphenyl-4,4'-diylbis(2-hydroxy-4,4-dimethylmorpholin-4-ium), CHOLESTEROL HEMISUCCINATE, HEXADECANE, ... Authors: Gao, Y, Qiu, Y, Zhao, Y. Deposit date: 2023-04-27 Release date: 2024-04-03 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Transport mechanism of presynaptic high-affinity choline uptake by CHT1. Nat.Struct.Mol.Biol., 31, 2024
6UFM	Cocrystal Structure of the Nocardia farcinica ileS T-box riboswitch in complex with its cognate tRNA Descriptor: RNA (77-MER), RNA (98-MER), SULFATE ION Authors: Suddala, K.C, Zhang, J. Deposit date: 2019-09-24 Release date: 2019-12-04 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.82 Å) Cite: High-affinity recognition of specific tRNAs by an mRNA anticodon-binding groove. Nat.Struct.Mol.Biol., 26, 2019
4V47	Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosome Descriptor: 16S RIBOSOMAL RNA, 23S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ... Authors: Gao, H, Sengupta, J, Valle, M, Korostelev, A, Eswar, N, Stagg, S.M, Van Roey, P, Agrawal, R.K, Harvey, S.T, Sali, A, Chapman, M.S, Frank, J. Deposit date: 2003-05-06 Release date: 2014-07-09 Last modified: 2024-02-28 Method: ELECTRON MICROSCOPY (12.3 Å) Cite: Study of the structural dynamics of the E. coli 70S ribosome using real space refinement Cell(Cambridge,Mass.), 113, 2003
8J29	Structures of the C-terminal subenzyme of the malonyl-CoA reductase from Chloroflexus aurantiacus Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Short-chain dehydrogenase/reductase SDR Authors: Ma, Q, Liu, C. Deposit date: 2023-04-14 Release date: 2024-04-17 Method: X-RAY DIFFRACTION (1.88 Å) Cite: Structures of the C-terminal subenzyme of the malonyl-CoA reductase from Chloroflexus aurantiacus To Be Published
8J2A	Structure of the C-terminal subenzyme of the malonyl-CoA reductase from Chloroflexus aurantiacus, in complex with NADP+ Descriptor: GLYCEROL, MAGNESIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... Authors: Ma, Q, Liu, C. Deposit date: 2023-04-14 Release date: 2024-04-17 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structures of the C-terminal subenzyme of the malonyl-CoA reductase from Chloroflexus aurantiacus To Be Published
8J2D	Structure of the C-terminal subenzyme of the malonyl-CoA reductase from Chloroflexus aurantiacus, mutant N940V/K1106W/S1114R in complex with NADP+ Descriptor: GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Short-chain dehydrogenase/reductase SDR Authors: Ma, Q, Liu, C. Deposit date: 2023-04-14 Release date: 2024-04-17 Method: X-RAY DIFFRACTION (2.21 Å) Cite: Structures of the C-terminal subenzyme of the malonyl-CoA reductase from Chloroflexus aurantiacus To Be Published
4N6Q	Crystal structure of VosA velvet domain Descriptor: IODIDE ION, NITRATE ION, VosA Authors: Ahmed, Y.L, Dickmanns, A, Neumann, P, Ficner, R. Deposit date: 2013-10-14 Release date: 2014-01-22 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.79 Å) Cite: The Velvet Family of Fungal Regulators Contains a DNA-Binding Domain Structurally Similar to NF-kappa B. Plos Biol., 11, 2013
8J2C	Structure of the C-terminal subenzyme of the malonyl-CoA reductase from Chloroflexus aurantiacus, mutant N940V/K1106W/S1114R Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Short-chain dehydrogenase/reductase SDR Authors: Ma, Q, Liu, C. Deposit date: 2023-04-14 Release date: 2024-04-17 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structures of the C-terminal subenzyme of the malonyl-CoA reductase from Chloroflexus aurantiacus To Be Published
8J2E	Structure of the C-terminal subenzyme of the malonyl-CoA reductase from Chloroflexus aurantiacus, mutant N940V/K1106W/S1114R in complex with NADP+ and malonate Descriptor: MALONIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Short-chain dehydrogenase/reductase SDR Authors: Ma, Q, Liu, C. Deposit date: 2023-04-14 Release date: 2024-04-17 Method: X-RAY DIFFRACTION (2.12 Å) Cite: Structures of the C-terminal subenzyme of the malonyl-CoA reductase from Chloroflexus aurantiacus To Be Published
4NAO	Crystal structure of EasH Descriptor: 2-OXOGLUTARIC ACID, FE (II) ION, HEXAETHYLENE GLYCOL, ... Authors: Janke, R, Havemann, J, Vogel, D, Keller, U, Loll, B. Deposit date: 2013-10-22 Release date: 2014-01-15 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.649 Å) Cite: Cyclolization of d-lysergic Acid alkaloid peptides. Chem.Biol., 21, 2014
8J2B	Structure of the C-terminal subenzyme of the malonyl-CoA reductase from Chloroflexus aurantiacus, in complex with NADP+ and malonate Descriptor: MALONIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Short-chain dehydrogenase/reductase SDR Authors: Ma, Q, Liu, C. Deposit date: 2023-04-14 Release date: 2024-04-17 Method: X-RAY DIFFRACTION (2.13 Å) Cite: Structures of the C-terminal subenzyme of the malonyl-CoA reductase from Chloroflexus aurantiacus To Be Published
6EPA	Structure of dNCS-1 bound to the NCS-1/Ric8a protein/protein interaction regulator IGS-1.76 Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, CALCIUM ION, FI18190p1, ... Authors: Sanchez-Barrena, M.J, Daniel, M, Infantes, L. Deposit date: 2017-10-11 Release date: 2018-08-29 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.82 Å) Cite: Deciphering the Inhibition of the Neuronal Calcium Sensor 1 and the Guanine Exchange Factor Ric8a with a Small Phenothiazine Molecule for the Rational Generation of Therapeutic Synapse Function Regulators. J. Med. Chem., 61, 2018
6U37	Structure of VX-phosphonylated hAChE in complex with oxime reactivator RS194B Descriptor: (2E)-N-[2-(azepan-1-yl)ethyl]-2-(hydroxyimino)acetamide, Acetylcholinesterase, GLYCEROL, ... Authors: Kovalevsky, A, Gerlits, O, Radic, Z. Deposit date: 2019-08-21 Release date: 2020-02-12 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Rational design, synthesis, and evaluation of uncharged, "smart" bis-oxime antidotes of organophosphate-inhibited human acetylcholinesterase. J.Biol.Chem., 295, 2020

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