PDB: 665 resultsInfo pagesStatus searchChemie searchBIRD

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3GDU	Crystal structure of DegS H198P/D320A mutant modified by DFP and in complex with YRF peptide Descriptor: DegS protease, YRF peptide Authors: Sohn, J, Grant, R.A, Sauer, R.T. Deposit date: 2009-02-24 Release date: 2009-03-31 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (3 Å) Cite: OMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism. Structure, 17, 2009
3GCN	Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with OMP peptide (YQF) Descriptor: Protease degS, YQF peptide Authors: Sohn, J, Sauer, R.T, Grant, R.A. Deposit date: 2009-02-22 Release date: 2009-03-31 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (3.002 Å) Cite: Mechanisms of allosteric activation of the DegS protease by OMP-peptide binding and protein-substrate binding To be Published
3GDV	Crystal structure of DegS H198P/D320A mutant modified by DFP and in complex with YQF peptide Descriptor: DegS protease, YQF peptide Authors: Sohn, J, Grant, R.A, Sauer, R.T. Deposit date: 2009-02-24 Release date: 2009-03-31 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2.489 Å) Cite: OMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism. Structure, 17, 2009
3GCO	Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with DNRDGNVYQF OMP peptide Descriptor: DNRDGNVYQF peptide, Protease degS Authors: Sohn, J, Grant, R.A, Sauer, R.T. Deposit date: 2009-02-22 Release date: 2009-03-31 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2.798 Å) Cite: OMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism. Structure, 17, 2009
3GDS	Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with DNRDGNVYYF peptide Descriptor: DNRDGNVYYF peptide, Protease degS Authors: Sohn, J, Grant, R.A, Sauer, R.T. Deposit date: 2009-02-24 Release date: 2009-03-31 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2.85 Å) Cite: OMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism. Structure, 17, 2009
1NF3	Structure of Cdc42 in a complex with the GTPase-binding domain of the cell polarity protein, Par6 Descriptor: G25K GTP-binding protein, placental isoform, MAGNESIUM ION, ... Authors: Garrard, S.M, Capaldo, C.T, Gao, L, Rosen, M.K, Macara, I.G, Tomchick, D.R. Deposit date: 2002-12-12 Release date: 2003-03-04 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure of Cdc42 in a complex with the GTPase-binding domain of the cell polarity protein, Par6 Embo J., 22, 2003
7QQL	The PDZ domain of SNTG2 complexed with the phosphorylated PDZ-binding motif of RSK1 Descriptor: CALCIUM ION, GLYCEROL, Gamma-2-syntrophin,Annexin A2, ... Authors: Cousido-Siah, A, Trave, G, Gogl, G. Deposit date: 2022-01-10 Release date: 2022-04-20 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (2.44 Å) Cite: A scalable strategy to solve structures of PDZ domains and their complexes. Acta Crystallogr D Struct Biol, 78, 2022
7QQN	The PDZ domain of SNTG1 complexed with the acetylated PDZ-binding motif of TRPV3 Descriptor: CALCIUM ION, GLYCEROL, Gamma-1-syntrophin,Annexin A2, ... Authors: Cousido-Siah, A, Trave, G, Gogl, G. Deposit date: 2022-01-10 Release date: 2022-04-20 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.45 Å) Cite: A scalable strategy to solve structures of PDZ domains and their complexes. Acta Crystallogr D Struct Biol, 78, 2022
7QQM	The PDZ domain of LRRC7 fused with ANXA2 Descriptor: CALCIUM ION, GLYCEROL, Leucine-rich repeat-containing protein 7,Annexin A2 Authors: Cousido-Siah, A, Trave, G, Gogl, G. Deposit date: 2022-01-10 Release date: 2022-04-20 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.6 Å) Cite: A scalable strategy to solve structures of PDZ domains and their complexes. Acta Crystallogr D Struct Biol, 78, 2022
5F3X	Crystal structure of Harmonin NPDZ1 in complex with ANKS4B SAM-PBM Descriptor: Ankyrin repeat and SAM domain-containing protein 4B, CHLORIDE ION, Harmonin Authors: Li, J, He, Y, Lu, Q, Zhang, M. Deposit date: 2015-12-03 Release date: 2016-03-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.649 Å) Cite: Mechanistic Basis of Organization of the Harmonin/USH1C-Mediated Brush Border Microvilli Tip-Link Complex Dev.Cell, 36, 2016
8AEL	SYNJ2BP complex with a synthetic Vangl2 peptide (3mer). Descriptor: CALCIUM ION, GLY-GLY-GLY-THR-SER-VAL, GLYCEROL, ... Authors: Carrasco, K, Cousido Siah, A, Gogl, G, Betzi, S, McEwen, A, Kostmann, C, Trave, G. Deposit date: 2022-07-13 Release date: 2023-08-16 Last modified: 2024-09-04 Method: X-RAY DIFFRACTION (2.2 Å) Cite: SYNJ2BP PDZ domain in complex with a synthetic Vangl2 peptide. To Be Published
2R3Y	Crystal structure of the DegS protease in complex with the YWF activating peptide Descriptor: Protease degS, Synthetic peptide YWF Authors: Clausen, T, Hasselblatt, H. Deposit date: 2007-08-30 Release date: 2007-11-27 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Regulation of the sigmaE stress response by DegS: how the PDZ domain keeps the protease inactive in the resting state and allows integration of different OMP-derived stress signals upon folding stress. Genes Dev., 21, 2007
1SOZ	Crystal Structure of DegS protease in complex with an activating peptide Descriptor: Protease degS, activating peptide Authors: Wilken, C, Kitzing, K, Kurzbauer, R, Ehrmann, M, Clausen, T. Deposit date: 2004-03-16 Release date: 2004-06-08 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Crystal structure of the DegS stress sensor: How a PDZ domain recognizes misfolded protein and activates a protease Cell(Cambridge,Mass.), 117, 2004
1VCW	Crystal structure of DegS after backsoaking the activating peptide Descriptor: Protease degS Authors: Wilken, C, Kitzing, K, Kurzbauer, R, Ehrmann, M, Clausen, T. Deposit date: 2004-03-16 Release date: 2004-06-08 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (3.05 Å) Cite: Crystal structure of the DegS stress sensor: How a PDZ domain recognizes misfolded protein and activates a protease. Cell(Cambridge,Mass.), 117, 2004
1TE0	Structural analysis of DegS, a stress sensor of the bacterial periplasm Descriptor: Protease degS Authors: Ravelli, R.B.G, Zeth, K. Deposit date: 2004-05-24 Release date: 2004-11-30 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural analysis of DegS, a stress sensor of the bacterial periplasm. FEBS Lett., 569, 2004

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