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3F6Q
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BU of 3f6q by Molmil
Crystal structure of integrin-linked kinase ankyrin repeat domain in complex with PINCH1 LIM1 domain
Descriptor: IODIDE ION, Integrin-linked protein kinase, LIM and senescent cell antigen-like-containing domain protein 1, ...
Authors:Chiswell, B.P, Calderwood, D.A, Boggon, T.J.
Deposit date:2008-11-06
Release date:2008-12-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The structural basis of integrin-linked kinase-PINCH interactions.
Proc.Natl.Acad.Sci.USA, 105, 2008
7D83
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BU of 7d83 by Molmil
Crystal structure of HIV-1 integrase catalytic core domain in complex with 2-(tert-butoxy)-2-(2-(3-cyclohexylureido)-3,6-dimethyl-5-(5-methylchroman-6-yl)pyridin-4-yl)acetic acid
Descriptor: (2S)-2-[2-(cyclohexylcarbamoylamino)-3,6-dimethyl-5-(5-methyl-3,4-dihydro-2H-chromen-6-yl)pyridin-4-yl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid, Integrase, SULFATE ION
Authors:Sugiyama, S, Sekiguchi, Y.
Deposit date:2020-10-07
Release date:2021-01-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Discovery of novel HIV-1 integrase-LEDGF/p75 allosteric inhibitors based on a pyridine scaffold forming an intramolecular hydrogen bond.
Bioorg.Med.Chem.Lett., 33, 2020
2IVU
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BU of 2ivu by Molmil
Crystal structure of phosphorylated RET tyrosine kinase domain complexed with the inhibitor ZD6474
Descriptor: FORMIC ACID, PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RECEPTOR RET PRECURSOR, Vandetanib
Authors:Knowles, P.P, Murray-Rust, J, McDonald, N.Q.
Deposit date:2006-06-16
Release date:2006-08-10
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and chemical inhibition of the RET tyrosine kinase domain.
J. Biol. Chem., 281, 2006
7DEL
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BU of 7del by Molmil
Crystal structure of P.aeruginosa LpxC in complex with inhibitor
Descriptor: 3-[4-[2-[3-[[2-[(1~{S})-1-oxidanylethyl]imidazol-1-yl]methyl]-1,2-oxazol-5-yl]ethynyl]phenyl]propan-1-ol, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ZINC ION
Authors:Mima, M, Ushiyama, F, Tanaka-Yamamoto, N.
Deposit date:2020-11-04
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Lead optimization of 2-hydroxymethyl imidazoles as non-hydroxamate LpxC inhibitors: Discovery of TP0586532.
Bioorg.Med.Chem., 30, 2020
7DEM
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BU of 7dem by Molmil
Crystal structure of P.aeruginosa LpxC in complex with inhibitor
Descriptor: 5-[4-[3-[[2-[(1~{S})-1-oxidanylethyl]imidazol-1-yl]methyl]-1,2-oxazol-5-yl]phenyl]pent-4-yn-1-ol, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ZINC ION
Authors:Mima, M, Ushiyama, F, Matsuda, Y.
Deposit date:2020-11-04
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Lead optimization of 2-hydroxymethyl imidazoles as non-hydroxamate LpxC inhibitors: Discovery of TP0586532.
Bioorg.Med.Chem., 30, 2020
5O9Z
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BU of 5o9z by Molmil
Cryo-EM structure of a pre-catalytic human spliceosome primed for activation (B complex)
Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, Homo sapiens RNA, U6 small nuclear 1 (RNU6-1), ...
Authors:Bertram, K, Kastner, B.
Deposit date:2017-06-20
Release date:2017-08-16
Last modified:2025-07-09
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Cryo-EM Structure of a Pre-catalytic Human Spliceosome Primed for Activation.
Cell, 170, 2017
5O8O
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BU of 5o8o by Molmil
N. crassa Tom40 model based on cryo-EM structure of the TOM core complex at 6.8 A
Descriptor: Mitochondrial import receptor subunit tom40
Authors:Bausewein, T, Mills, D.J, Nussberger, S, Nitschke, B, Kuehlbrandt, W.
Deposit date:2017-06-13
Release date:2017-08-16
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Cryo-EM Structure of the TOM Core Complex from Neurospora crassa.
Cell, 170, 2017
7D6T
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BU of 7d6t by Molmil
X-ray structure of Clostridium perfringens sortase C with the C-terminal cell wall sorting motif.
Descriptor: Sortase family protein
Authors:Kamitori, S, Tamai, E.
Deposit date:2020-10-01
Release date:2021-06-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:X-ray structures of Clostridium perfringens sortase C with C-terminal cell wall sorting motif of LPST demonstrate role of subsite for substrate-binding and structural variations of catalytic site.
Biochem.Biophys.Res.Commun., 554, 2021
7BMT
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BU of 7bmt by Molmil
HEWL in sodium chloride
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme, ...
Authors:Koelmel, W, Kuper, J, Kisker, C.
Deposit date:2021-01-20
Release date:2021-10-06
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Cesium based phasing of macromolecules: a general easy to use approach for solving the phase problem.
Sci Rep, 11, 2021
2JIH
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BU of 2jih by Molmil
Crystal Structure of Human ADAMTS-1 catalytic Domain and Cysteine- Rich Domain (complex-form)
Descriptor: (2S,3R)-N~4~-[(1S)-2,2-dimethyl-1-(methylcarbamoyl)propyl]-N~1~,2-dihydroxy-3-(2-methylpropyl)butanediamide, ADAMTS-1, CADMIUM ION, ...
Authors:Gerhardt, S, Hassall, G, Hawtin, P, McCall, E, Flavell, L, Minshull, C, Hargreaves, D, Ting, A, Pauptit, R.A, Parker, A.E, Abbott, W.M.
Deposit date:2007-06-28
Release date:2008-01-15
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of human ADAMTS-1 reveal a conserved catalytic domain and a disintegrin-like domain with a fold homologous to cysteine-rich domains.
J. Mol. Biol., 373, 2007
2B90
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BU of 2b90 by Molmil
Crystal structure of the interleukin-4 variant T13DR85A
Descriptor: Interleukin-4, SULFATE ION
Authors:Kraich, M, Klein, M, Patino, E, Harrer, H, Sebald, W, Mueller, T.D.
Deposit date:2005-10-10
Release date:2006-05-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor
Bmc Biol., 4, 2006
2B91
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BU of 2b91 by Molmil
Crystal structure of the interleukin-4 variant F82DR85A
Descriptor: Interleukin-4, SULFATE ION
Authors:Kraich, M, Klein, M, Patino, E, Harrer, H, Sebald, W, Mueller, T.D.
Deposit date:2005-10-10
Release date:2006-05-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor
Bmc Biol., 4, 2006
2B8Z
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BU of 2b8z by Molmil
Crystal structure of the interleukin-4 variant R85A
Descriptor: Interleukin-4, SULFATE ION
Authors:Kraich, M, Klein, M, Patino, E, Harrer, H, Sebald, W, Mueller, T.D.
Deposit date:2005-10-10
Release date:2006-05-30
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor
Bmc Biol., 4, 2006
2LKB
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BU of 2lkb by Molmil
Evolutionary diversification of Mesobuthus alpha-scorpion toxins affecting sodium channels
Descriptor: Neurotoxin MeuNaTx-5
Authors:Zhu, S, Peigneur, S, Gao, B, Lu, X, Cao, C, Tytgat, J.
Deposit date:2011-10-09
Release date:2011-11-02
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Evolutionary diversification of Mesobuthus {alpha}-scorpion toxins affecting sodium channels
Mol.Cell Proteomics, 2011
2BZS
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BU of 2bzs by Molmil
Binding of anti-cancer prodrug CB1954 to the activating enzyme NQO2 revealed by the crystal structure of their complex.
Descriptor: 5-(AZIRIDIN-1-YL)-2,4-DINITROBENZAMIDE, FLAVIN-ADENINE DINUCLEOTIDE, NRH DEHYDROGENASE [QUINONE] 2, ...
Authors:Abu Khader, M.M, Heap, J.T, De Matteis, C, Kellam, B, Doughty, S.W, Minton, N, Paoli, M.
Deposit date:2005-08-22
Release date:2005-09-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Binding of the Anticancer Prodrug Cb1954 to the Activating Enzyme Nqo2 Revealed by the Crystal Structure of Their Complex.
J.Med.Chem., 48, 2005
7ECT
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BU of 7ect by Molmil
Crystal Structure of Aspergillus terreus Glutamate Dehydrogenase (AtGDH) Complexed With Tartrate and NADPH
Descriptor: GLYCEROL, Glutamate dehydrogenase, L(+)-TARTARIC ACID, ...
Authors:Godsora, B.K.J, Prakash, P, Punekar, N.S, Bhaumik, P.
Deposit date:2021-03-13
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Molecular insights into the inhibition of glutamate dehydrogenase by the dicarboxylic acid metabolites.
Proteins, 90, 2022
7ECR
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BU of 7ecr by Molmil
Crystal Structure of Aspergillus terreus Glutamate Dehydrogenase (AtGDH) Complexed With Succinate and ADP-ribose
Descriptor: GLYCEROL, Glutamate dehydrogenase, SUCCINIC ACID, ...
Authors:Godsora, B.K.J, Prakash, P, Punekar, N.S, Bhaumik, P.
Deposit date:2021-03-13
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Molecular insights into the inhibition of glutamate dehydrogenase by the dicarboxylic acid metabolites.
Proteins, 90, 2022
7ECS
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BU of 7ecs by Molmil
Crystal Structure of Aspergillus terreus Glutamate Dehydrogenase (AtGDH) Complexed With Malonate and NADPH
Descriptor: GLYCEROL, Glutamate dehydrogenase, MALONATE ION, ...
Authors:Godsora, B.K.J, Prakash, P, Punekar, N.S, Bhaumik, P.
Deposit date:2021-03-13
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Molecular insights into the inhibition of glutamate dehydrogenase by the dicarboxylic acid metabolites.
Proteins, 90, 2022
7EGU
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BU of 7egu by Molmil
Structure of human NNMT in complex with macrocyclic peptide X
Descriptor: Nicotinamide N-methyltransferase, macrocyclic peptide X
Authors:Hayashi, K, Mikamiyama, H, Uehara, S, Yamamoto, S, Cary, D, Nishikawa, J, Ueda, T, Ozasa, H, Mihara, K, Yoshimura, N, Kawai, T, Ono, T, Yamamoto, S, Fumoto, M.
Deposit date:2021-03-26
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Macrocyclic Peptides as a Novel Class of NNMT Inhibitors: A SAR Study Aimed at Inhibitory Activity in the Cell.
Acs Med.Chem.Lett., 12, 2021
7DCF
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BU of 7dcf by Molmil
Crystal structure of EHMT2 SET domain in complex with compound 10
Descriptor: 5'-methoxy-6'-(1-methyl-2,3,4,7-tetrahydroazepin-5-yl)spiro[cyclobutane-1,3'-indole]-2'-amine, Histone-lysine N-methyltransferase EHMT2, S-ADENOSYLMETHIONINE, ...
Authors:Suzuki, M, Katayama, K.
Deposit date:2020-10-26
Release date:2021-02-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of DS79932728: A Potent, Orally Available G9a/GLP Inhibitor for Treating beta-Thalassemia and Sickle Cell Disease.
Acs Med.Chem.Lett., 12, 2021
3G0V
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BU of 3g0v by Molmil
Crystal structure of the C-terminal domain from the Rous Sarcoma Virus capsid protein: mutant D179A
Descriptor: Gag polyprotein, NITRATE ION
Authors:Kingston, R.L.
Deposit date:2009-01-29
Release date:2009-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Proton-linked dimerization of a retroviral capsid protein initiates capsid assembly
Structure, 17, 2009
3FYD
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BU of 3fyd by Molmil
Crystal Structure of Dim1 from the thermophilic archeon, Methanocaldococcus jannaschi
Descriptor: Probable dimethyladenosine transferase, SULFATE ION
Authors:Scarsdale, J.N, Musayev, F.N, Rife, J.P.
Deposit date:2009-01-22
Release date:2009-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and functional divergence within the Dim1/KsgA family of rRNA methyltransferases.
J.Mol.Biol., 391, 2009
2JKC
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BU of 2jkc by Molmil
Crystal Structure of E346D of Tryptophan 7-Halogenase (PrnA)
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent tryptophan halogenase PrnA, ...
Authors:Zhu, X, Naismith, J.H.
Deposit date:2008-08-26
Release date:2008-09-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:New insights into the mechanism of enzymatic chlorination of tryptophan.
Angew. Chem. Int. Ed. Engl., 47, 2008
5O0H
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BU of 5o0h by Molmil
Crystal structure of Phosphopantetheine adenylyltransferase from Mycobacterium abcessus in complex with 2-(4-Chloro-3-nitrobenzoyl)benzoic acid (Fragment 6)
Descriptor: 2-(4-chloranyl-3-nitro-phenyl)carbonylbenzoic acid, Phosphopantetheine adenylyltransferase
Authors:Thomas, S.E, Kim, S.Y, Mendes, V, Blaszczyk, M, Blundell, T.L.
Deposit date:2017-05-16
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:Structural Biology and the Design of New Therapeutics: From HIV and Cancer to Mycobacterial Infections: A Paper Dedicated to John Kendrew.
J. Mol. Biol., 429, 2017
7EKZ
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BU of 7ekz by Molmil
Structural and functional insights into Hydra Actinoporin-Like Toxin 1 (HALT-1)
Descriptor: FORMIC ACID, GLYCEROL, HALT-1
Authors:Ker, D.S, Sha, X.H, Jonet, M.A, Hwang, J.S, Ng, C.L.
Deposit date:2021-04-07
Release date:2022-02-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Structural and functional analysis of Hydra Actinoporin-Like Toxin 1 (HALT-1).
Sci Rep, 11, 2021

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