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8VRT
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BU of 8vrt by Molmil
The structure of LSD1-CoREST-HDAC1 in complex with KBTBD4R313PRR mutant
Descriptor: Histone deacetylase 1, INOSITOL HEXAKISPHOSPHATE, Kelch repeat and BTB domain-containing protein 4, ...
Authors:Xie, X, Liau, B, Zheng, N.
Deposit date:2024-01-22
Release date:2024-11-27
Last modified:2025-06-11
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Converging mechanism of UM171 and KBTBD4 neomorphic cancer mutations.
Nature, 639, 2025
7SU3
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BU of 7su3 by Molmil
CryoEM structure of DNA-PK complex VII
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*AP*GP*CP*AP*GP*TP*AP*GP*AP*G)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*CP*TP*CP*TP*AP*CP*TP*GP*CP*TP*TP*CP*GP*AP*TP*AP*TP*CP*G)-3'), ...
Authors:Chen, X, Liu, L, Gellert, M, Yang, W.
Deposit date:2021-11-16
Release date:2022-01-12
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Autophosphorylation transforms DNA-PK from protecting to processing DNA ends.
Mol.Cell, 82, 2022
7SGL
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BU of 7sgl by Molmil
DNA-PK complex of DNA end processing
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA-dependent protein kinase catalytic subunit, Hairpin_1, ...
Authors:Liu, L, Li, J, Chen, X, Yang, W, Gellert, M.
Deposit date:2021-10-06
Release date:2022-01-12
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Autophosphorylation transforms DNA-PK from protecting to processing DNA ends.
Mol.Cell, 82, 2022
9E8O
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BU of 9e8o by Molmil
Nub1/Fat10-processing human 26S proteasome bound to Txnl1 with Rpt2 at top of spiral staircase and partially unfolded Eos
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 8, 26S proteasome complex subunit SEM1, ...
Authors:Arkinson, C, Gee, C.L, Martin, A.
Deposit date:2024-11-05
Release date:2024-12-04
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural landscape of AAA+ ATPase motor states in the substrate-degrading human 26S proteasome reveals conformation-specific binding of TXNL1.
Biorxiv, 2024
7ZI4
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BU of 7zi4 by Molmil
Cryo-EM structure of the human INO80 complex bound to a WT nucleosome
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-related protein 5, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Vance, N.R, Ayala, R, Willhoft, O, Tvardovskiy, A, McCormack, E.A, Bartke, T, Zhang, X, Wigley, D.B.
Deposit date:2022-04-07
Release date:2023-04-19
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of the human INO80 complex bound to a WT nucleosome
To Be Published
3WA9
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BU of 3wa9 by Molmil
The nucleosome containing human H2A.Z.1
Descriptor: DNA (146-MER), Histone H2A.Z, Histone H2B type 1-J, ...
Authors:Horikoshi, N, Sato, K, Shimada, K, Arimura, Y, Osakabe, A, Tachiwana, H, Iwasaki, W, Kagawa, W, Harata, M, Kimura, H, Kurumizaka, H.
Deposit date:2013-04-30
Release date:2013-12-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Structural polymorphism in the L1 loop regions of human H2A.Z.1 and H2A.Z.2
Acta Crystallogr.,Sect.D, 69, 2013
2HYE
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BU of 2hye by Molmil
Crystal Structure of the DDB1-Cul4A-Rbx1-SV5V Complex
Descriptor: Cullin-4A, DNA damage-binding protein 1, Nonstructural protein V, ...
Authors:Angers, S, Li, T, Yi, X, MacCoss, M.J, Moon, R.T, Zheng, N.
Deposit date:2006-08-05
Release date:2006-10-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Molecular architecture and assembly of the DDB1-CUL4A ubiquitin ligase machinery.
Nature, 443, 2006
7S0U
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BU of 7s0u by Molmil
PRMT5/MEP50 crystal structure with MTA and phthalazinone fragment bound
Descriptor: 1,2-ETHANEDIOL, 4-(aminomethyl)phthalazin-1(2H)-one, 5'-DEOXY-5'-METHYLTHIOADENOSINE, ...
Authors:Gunn, R.J, Thomas, N.C, Lawson, J.D, Ivetac, A, Smith, C.R, Kulyk, S, Marx, M.A.
Deposit date:2021-08-31
Release date:2022-01-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Fragment-Based Discovery of MRTX1719, a Synthetic Lethal Inhibitor of the PRMT5•MTA Complex for the Treatment of MTAP -Deleted Cancers.
J.Med.Chem., 65, 2022
7S1R
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BU of 7s1r by Molmil
PRMT5/MEP50 crystal structure with MTA and a phthalazinone inhibitor bound (compound (M)-31)
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Methylosome protein 50, Protein arginine N-methyltransferase 5, ...
Authors:Gunn, R.J, Thomas, N.C, Lawson, J.D, Ivetac, A, Kulyk, S, Smith, C.R, Marx, M.A.
Deposit date:2021-09-02
Release date:2022-01-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Fragment-Based Discovery of MRTX1719, a Synthetic Lethal Inhibitor of the PRMT5•MTA Complex for the Treatment of MTAP -Deleted Cancers.
J.Med.Chem., 65, 2022
7S1S
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BU of 7s1s by Molmil
PRMT5/MEP50 crystal structure with MTA and MRTX-1719 bound
Descriptor: (7-{(5M)-5-[3-chloro-6-cyano-5-(cyclopropyloxy)-2-fluorophenyl]-1-methyl-1H-pyrazol-4-yl}-4-oxo-3,4-dihydrophthalazin-1-yl)methanaminium, 5'-DEOXY-5'-METHYLTHIOADENOSINE, Methylosome protein 50, ...
Authors:Gunn, R.J, Thomas, N.C, Lawson, J.D, Ivetac, A, Kulyk, S, Smith, C.R, Marx, M.A.
Deposit date:2021-09-02
Release date:2022-01-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Fragment-Based Discovery of MRTX1719, a Synthetic Lethal Inhibitor of the PRMT5•MTA Complex for the Treatment of MTAP -Deleted Cancers.
J.Med.Chem., 65, 2022
8B7W
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BU of 8b7w by Molmil
Complex IL-17A/anti-IL-17A-76
Descriptor: CHLORIDE ION, GLYCEROL, Interleukin-17A, ...
Authors:Kostareva, O.S, Svoeglazova, A, Kolyadenko, I.A, Dzhus, U.F, Tishchenko, S.V, Gabdulkhakov, A.G.
Deposit date:2022-10-03
Release date:2022-12-28
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Two Epitope Regions Revealed in the Complex of IL-17A and Anti-IL-17A V H H Domain.
Int J Mol Sci, 23, 2022
4XMN
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BU of 4xmn by Molmil
Structure of the yeast coat nucleoporin complex, space group P212121
Descriptor: Antibody 87 heavy chain, Antibody 87 light chain, Nucleoporin NUP120, ...
Authors:Stuwe, T, Correia, A.R, Lin, D.H, Paduch, M, Lu, V.T, Kossiakoff, A.A, Hoelz, A.
Deposit date:2015-01-14
Release date:2015-03-25
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (7.6 Å)
Cite:Nuclear pores. Architecture of the nuclear pore complex coat.
Science, 347, 2015
4XMM
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BU of 4xmm by Molmil
Structure of the yeast coat nucleoporin complex, space group C2
Descriptor: Antibody 57 heavy chain, Antibody 57 light chain, Nucleoporin NUP120, ...
Authors:Stuwe, T, Correia, A.R, Lin, D.H, Paduch, M, Lu, V.T, Kossiakoff, A.A, Hoelz, A.
Deposit date:2015-01-14
Release date:2015-03-25
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (7.384 Å)
Cite:Nuclear pores. Architecture of the nuclear pore complex coat.
Science, 347, 2015
8USB
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BU of 8usb by Molmil
Non-substrate-engaged human 26S proteasome with Nub1/FAT10 bound to Rpn1
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 8, 26S proteasome complex subunit SEM1, ...
Authors:Arkinson, C, Gee, C.L, Martin, A.
Deposit date:2023-10-27
Release date:2024-11-06
Last modified:2025-04-23
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:NUB1 traps unfolded FAT10 for ubiquitin-independent degradation by the 26S proteasome.
Nat.Struct.Mol.Biol., 2025
9E8N
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BU of 9e8n by Molmil
Nub1/Fat10-processing human 26S proteasome bound to Txnl1 with Rpt3 at top of spiral staircase
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 8, 26S proteasome complex subunit SEM1, ...
Authors:Arkinson, C, Gee, C.L, Martin, A.
Deposit date:2024-11-05
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Structural landscape of AAA+ ATPase motor states in the substrate-degrading human 26S proteasome reveals conformation-specific binding of TXNL1.
Biorxiv, 2024
8J07
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BU of 8j07 by Molmil
96nm repeat of human respiratory doublet microtubule and associated axonemal complexes
Descriptor: ACTA2, Axonemal dynein light intermediate polypeptide 1, Calaxin, ...
Authors:Gui, M, Brown, A.
Deposit date:2023-04-09
Release date:2023-07-26
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Axonemal structures reveal mechanoregulatory and disease mechanisms.
Nature, 618, 2023
9E8J
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BU of 9e8j by Molmil
Nub1/Fat10-processing human 26S proteasome bound to Txnl1 with Rpt1 at top of spiral staircase
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 8, 26S proteasome complex subunit SEM1, ...
Authors:Arkinson, C, Gee, C.L, Martin, A.
Deposit date:2024-11-05
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Structural landscape of AAA+ ATPase motor states in the substrate-degrading human 26S proteasome reveals conformation-specific binding of TXNL1.
Biorxiv, 2024
9E8I
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BU of 9e8i by Molmil
Human proteasome in resting state conformation bound to TXNL1 in Forward conformation
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 8, 26S proteasome complex subunit SEM1, ...
Authors:Arkinson, C, Gee, C.L, Martin, A.
Deposit date:2024-11-05
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Structural landscape of AAA+ ATPase motor states in the substrate-degrading human 26S proteasome reveals conformation-specific binding of TXNL1.
Biorxiv, 2024
9E8Q
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BU of 9e8q by Molmil
Nub1/Fat10-processing human 26S proteasome with Rpt2 at top of spiral staircase
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 8, 26S proteasome complex subunit SEM1, ...
Authors:Arkinson, C, Gee, C.L, Martin, A.
Deposit date:2024-11-05
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Structural landscape of AAA+ ATPase motor states in the substrate-degrading human 26S proteasome reveals conformation-specific binding of TXNL1.
Biorxiv, 2024
9E8H
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BU of 9e8h by Molmil
Human proteasome in resting state conformation bound to TXNL1 in backward conformation
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 8, 26S proteasome complex subunit SEM1, ...
Authors:Arkinson, C, Gee, C.L, Martin, A.
Deposit date:2024-11-05
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural landscape of AAA+ ATPase motor states in the substrate-degrading human 26S proteasome reveals conformation-specific binding of TXNL1.
Biorxiv, 2024
5A5B
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BU of 5a5b by Molmil
Structure of the 26S proteasome-Ubp6 complex
Descriptor: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ...
Authors:Aufderheide, A, Beck, F, Stengel, F, Hartwig, M, Schweitzer, A, Pfeifer, G, Goldberg, A.L, Sakata, E, Baumeister, W, Foerster, F.
Deposit date:2015-06-17
Release date:2015-07-22
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Structural Characterization of the Interaction of Ubp6 with the 26S Proteasome.
Proc.Natl.Acad.Sci.USA, 112, 2015
7SUD
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BU of 7sud by Molmil
CryoEM structure of DNA-PK complex VIII
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA-dependent protein kinase catalytic subunit, MAGNESIUM ION, ...
Authors:Chen, X, Liu, L, Gellert, M, Yang, W.
Deposit date:2021-11-16
Release date:2022-01-12
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Autophosphorylation transforms DNA-PK from protecting to processing DNA ends.
Mol.Cell, 82, 2022
9E8K
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BU of 9e8k by Molmil
Nub1/Fat10-processing human 26S proteasome bound to Txnl1 with Rpt6 at top of spiral staircase
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 8, 26S proteasome complex subunit SEM1, ...
Authors:Arkinson, C, Gee, C.L, Martin, A.
Deposit date:2024-11-05
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (4.08 Å)
Cite:Structural landscape of AAA+ ATPase motor states in the substrate-degrading human 26S proteasome reveals conformation-specific binding of TXNL1.
Biorxiv, 2024
7UD5
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BU of 7ud5 by Molmil
Complex between MLL1-WRAD and an H2B-ubiquitinated nucleosome
Descriptor: 601 DNA (146-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Niklas, H.A, Rahman, S, Worden, E.J, Wolberger, C.
Deposit date:2022-03-18
Release date:2022-09-21
Last modified:2024-12-25
Method:ELECTRON MICROSCOPY (4.25 Å)
Cite:Multistate structures of the MLL1-WRAD complex bound to H2B-ubiquitinated nucleosome.
Proc.Natl.Acad.Sci.USA, 119, 2022
7C4J
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BU of 7c4j by Molmil
Cryo-EM structure of the yeast Swi/Snf complex in a nucleosome free state
Descriptor: Actin-like protein ARP9, Actin-related protein 7, Regulator of Ty1 transposition protein 102, ...
Authors:Wang, C.C, Guo, Z.Y, Zhan, X.C, Zhang, X.F.
Deposit date:2020-05-18
Release date:2020-07-15
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Structure of the yeast Swi/Snf complex in a nucleosome free state
Nat Commun, 2020

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PDB entries from 2025-07-09

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