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8D2T
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BU of 8d2t by Molmil
Zebrafish MFSD2A isoform B in inward open ligand-free conformation
Descriptor: DODECYL-BETA-D-MALTOSIDE, FAB heavy chain, FAB light chain, ...
Authors:Nguyen, C, Lei, H.T, Lai, L.T.F, Gallentino, M.J, Mu, X, Matthies, D, Gonen, T.
Deposit date:2022-05-30
Release date:2023-05-10
Last modified:2023-05-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Lipid flipping in the omega-3 fatty-acid transporter.
Nat Commun, 14, 2023
8D2X
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BU of 8d2x by Molmil
Zebrafish MFSD2A isoform B in inward open ligand 3C conformation
Descriptor: DODECYL-BETA-D-MALTOSIDE, FAB heavy chain, FAB light chain, ...
Authors:Nguyen, C, Lei, H.T, Lai, L.T.F, Gallentino, M.J, Mu, X, Matthies, D, Gonen, T.
Deposit date:2022-05-30
Release date:2023-05-10
Last modified:2023-05-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Lipid flipping in the omega-3 fatty-acid transporter.
Nat Commun, 14, 2023
8D9H
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BU of 8d9h by Molmil
gRAMP-TPR-CHAT match PFS target RNA(Craspase)
Descriptor: CHAT domain protein, PHOSPHATE ION, RAMP superfamily protein, ...
Authors:Hu, C, Nam, K.H, Schuler, G, Ke, A.
Deposit date:2022-06-09
Release date:2023-06-14
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Craspase is a CRISPR RNA-guided, RNA-activated protease.
Science, 377, 2022
8D9E
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BU of 8d9e by Molmil
gRAMP-match PFS target
Descriptor: RAMP superfamily protein, RNA (36-MER), RNA (5'-R(P*UP*CP*CP*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*GP*GP*UP*A)-3'), ...
Authors:Hu, C, Nam, K.H, Schuler, G, Ke, A.
Deposit date:2022-06-09
Release date:2023-06-14
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Craspase is a CRISPR RNA-guided, RNA-activated protease.
Science, 377, 2022
6U2K
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BU of 6u2k by Molmil
EM structure of MPEG-1 (L425K, alpha conformation) soluble pre-pore complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Macrophage-expressed gene 1 protein
Authors:Pang, S.S, Bayly-Jones, C.
Deposit date:2019-08-20
Release date:2019-09-25
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:The cryo-EM structure of the acid activatable pore-forming immune effector Macrophage-expressed gene 1.
Nat Commun, 10, 2019
8D97
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BU of 8d97 by Molmil
Apo gRAMP
Descriptor: RAMP superfamily protein, RNA (42-MER), ZINC ION
Authors:Hu, C, Nam, K.H, Schuler, G, Ke, A.
Deposit date:2022-06-09
Release date:2023-06-14
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Craspase is a CRISPR RNA-guided, RNA-activated protease.
Science, 377, 2022
8D9F
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BU of 8d9f by Molmil
gRAMP-TPR-CHAT (Craspase)
Descriptor: CHAT domain protein, RAMP superfamily protein, RNA (33-MER), ...
Authors:Hu, C, Nam, K.H, Schuler, G, Ke, A.
Deposit date:2022-06-09
Release date:2023-06-14
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Craspase is a CRISPR RNA-guided, RNA-activated protease.
Science, 377, 2022
8D9G
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BU of 8d9g by Molmil
gRAMP-TPR-CHAT Non match PFS target RNA(Craspase)
Descriptor: CHAT domain protein, RAMP superfamily protein, RNA (36-MER), ...
Authors:Hu, C, Nam, K.H, Schuler, G, Ke, A.
Deposit date:2022-06-09
Release date:2023-06-14
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Craspase is a CRISPR RNA-guided, RNA-activated protease.
Science, 377, 2022
8D9I
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BU of 8d9i by Molmil
gRAMP non-matching PFS-with Mg
Descriptor: RAMP superfamily protein, RNA (35-MER), RNA (5'-R(P*UP*CP*CP*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*GP*A)-3'), ...
Authors:Hu, C, Nam, K.H, Schuler, G, Ke, A.
Deposit date:2022-06-09
Release date:2023-06-14
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Craspase is a CRISPR RNA-guided, RNA-activated protease.
Science, 377, 2022
8D0Y
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BU of 8d0y by Molmil
Crystal Structure of HIV-1 BG505 SOSIPv8 Trimer in Complex with CD4bs targeting antibody 21N13 and interface targeting antibody 35O22 at 4.7 Angstrom
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22scFv Heavy Chain Variable, ...
Authors:Xian, Y, Wilson, I.A.
Deposit date:2022-05-26
Release date:2023-07-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (4.7 Å)
Cite:The domain-swaped dimer of the HIV-1 CD4bs targeting antibody 21N13
To Be Published
8DS5
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BU of 8ds5 by Molmil
X-ray structure of the MK5890 Fab - CD27 antibody-antigen complex
Descriptor: CADMIUM ION, CD27 antigen, MK-5890 Fab heavy chain, ...
Authors:Fischmann, T.O.
Deposit date:2022-07-21
Release date:2022-09-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.926 Å)
Cite:Preclinical characterization and clinical translation of pharmacodynamic markers for MK-5890: a human CD27 activating antibody for cancer immunotherapy.
J Immunother Cancer, 10, 2022
7OVU
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BU of 7ovu by Molmil
Crystal structure of Arabidopsis thaliana NAT9 in complex with AcCoA
Descriptor: ACETYL COENZYME *A, Acyl-CoA N-acyltransferases (NAT) superfamily protein
Authors:Layer, D, Weyer, F.A, Kopp, J, Sinning, I.
Deposit date:2021-06-15
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of the Arabidopsis thaliana N-acetyltransferase 9
To Be Published
7PHG
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BU of 7phg by Molmil
MaP OF P5C3RBD Interface
Descriptor: Heavy ChaIn variable, Light ChaIn, Surface glycoprotein
Authors:Perez, L.
Deposit date:2021-08-17
Release date:2021-10-13
Last modified:2021-10-27
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:A highly potent antibody effective against SARS-CoV-2 variants of concern.
Cell Rep, 37, 2021
4TSX
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BU of 4tsx by Molmil
HIV-1 Integrase Catalytic Core Domain Mutant Complexed with Allosteric Inhibitor
Descriptor: (2S)-tert-butoxy[4-(3,4-dihydro-2H-chromen-6-yl)-2-methylquinolin-3-yl]ethanoic acid, Integrase, SULFATE ION
Authors:Feng, L, Kvaratskhelia, M.
Deposit date:2014-06-19
Release date:2014-12-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:The mechanism of H171T resistance reveals the importance of N -protonated His171 for the binding of allosteric inhibitor BI-D to HIV-1 integrase.
Retrovirology, 11, 2014
7Q03
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BU of 7q03 by Molmil
Ketol-acid reductoisomerase from Methanothermococcus thermolithotrophicus in the close state with NADP and Mg2+
Descriptor: 1,2-ETHANEDIOL, 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL, GLYCEROL, ...
Authors:Lemaire, O.N, Mueller, M, Wagner, T.
Deposit date:2021-10-14
Release date:2021-12-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Rearrangements of a Dodecameric Ketol-Acid Reductoisomerase Isolated from a Marine Thermophilic Methanogen.
Biomolecules, 11, 2021
7Q07
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BU of 7q07 by Molmil
Ketol-acid reductoisomerase from Methanothermococcus thermolithotrophicus in the open state with NADP and tartrate
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Ketol-Acid Reductoisomerase from Methanothermococcus thermolithotrophicus, ...
Authors:Lemaire, O.N, Mueller, M, Wagner, T.
Deposit date:2021-10-14
Release date:2021-12-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Rearrangements of a Dodecameric Ketol-Acid Reductoisomerase Isolated from a Marine Thermophilic Methanogen.
Biomolecules, 11, 2021
5FWP
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BU of 5fwp by Molmil
Atomic cryoEM structure of Hsp90-Cdc37-Cdk4 complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CYCLIN-DEPENDENT KINASE 4, HEAT SHOCK PROTEIN HSP 90 BETA, ...
Authors:Verba, K.A, Wang, R.Y.R, Arakawa, A, Liu, Y, Yokoyama, S, Agard, D.A.
Deposit date:2016-02-18
Release date:2016-10-26
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Atomic Structure of Hsp90:Cdc37:Cdk4 Reveals that Hsp90 Traps and Stabilizes an Unfolded Kinase.
Science, 352, 2016
2FYL
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BU of 2fyl by Molmil
Haddock model of the complex between double module of LRP, CR56, and first domain of receptor associated protein, RAP-d1.
Descriptor: Alpha-2-macroglobulin receptor-associated protein, CALCIUM ION, Low-density lipoprotein receptor-related protein 1
Authors:Jensen, G.A, Andersen, O.M, Bonvin, A.M, Bjerrum-Bohr, I, Etzerodt, M, O'shea, C, Poulsen, F.M, Kragelund, B.B.
Deposit date:2006-02-08
Release date:2006-10-10
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Binding Site Structure of One LRP-RAP Complex:Implications for a Common Ligand-Receptor Binding Motif.
J.Mol.Biol., 362, 2006
7Q39
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BU of 7q39 by Molmil
Ribonucleotide Reductase R2_genomic protein from Aquifex aeolicus
Descriptor: FE (III) ION, Ribonucleoside-diphosphate reductase subunit beta
Authors:Scaletti, E, Rehling, D, Stenmark, P.
Deposit date:2021-10-27
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Biochemical Investigation of Class I Ribonucleotide Reductase from the Hyperthermophile Aquifex aeolicus.
Biochemistry, 61, 2022
1BA5
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BU of 1ba5 by Molmil
DNA-BINDING DOMAIN OF HUMAN TELOMERIC PROTEIN, HTRF1, NMR, 18 STRUCTURES
Descriptor: HTRF1
Authors:Nishikawa, T, Nagadoi, A, Yoshimura, S, Aimoto, S, Nishimura, Y.
Deposit date:1998-04-22
Release date:1999-04-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the DNA-binding domain of human telomeric protein, hTRF1.
Structure, 6, 1998
7Q3C
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BU of 7q3c by Molmil
Ribonucleotide Reductase AaR2 protein from Aquifex aeolicus
Descriptor: FE (III) ION, Ribonucleoside-diphosphate reductase subunit beta
Authors:Scaletti, E.R, Rehling, D, Stenmark, P.
Deposit date:2021-10-27
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and Biochemical Investigation of Class I Ribonucleotide Reductase from the Hyperthermophile Aquifex aeolicus.
Biochemistry, 61, 2022
7B93
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BU of 7b93 by Molmil
Cryo-EM structure of mitochondrial complex I from Mus musculus inhibited by IACS-2858 at 3.0 A
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, 1-[[3-(4-methylsulfonylpiperidin-1-yl)phenyl]methyl]-5-[3-[4-(trifluoromethyloxy)phenyl]-1,2,4-oxadiazol-5-yl]pyridin-2-one, ...
Authors:Chung, I, Hirst, J.
Deposit date:2020-12-14
Release date:2021-05-26
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Cork-in-bottle mechanism of inhibitor binding to mammalian complex I.
Sci Adv, 7, 2021
8G7U
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BU of 8g7u by Molmil
Cryo-EM structure of Riplet:RIG-I:dsRNA complex (end-semi-closed end)
Descriptor: Antiviral innate immune response receptor RIG-I, E3 ubiquitin-protein ligase RNF135, ZINC ION, ...
Authors:Wang, W, Pyle, A.M.
Deposit date:2023-02-17
Release date:2023-11-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The E3 ligase Riplet promotes RIG-I signaling independent of RIG-I oligomerization.
Nat Commun, 14, 2023
8G7T
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BU of 8g7t by Molmil
Cryo-EM structure of Riplet:RIG-I:dsRNA complex (end-end)
Descriptor: Antiviral innate immune response receptor RIG-I, E3 ubiquitin-protein ligase RNF135, ZINC ION, ...
Authors:Wang, W, Pyle, A.M.
Deposit date:2023-02-17
Release date:2023-11-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The E3 ligase Riplet promotes RIG-I signaling independent of RIG-I oligomerization.
Nat Commun, 14, 2023
8G7V
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BU of 8g7v by Molmil
Cryo-EM structure of Riplet:RIG-I:dsRNA complex (end-inter)
Descriptor: Antiviral innate immune response receptor RIG-I, E3 ubiquitin-protein ligase RNF135, ZINC ION, ...
Authors:Wang, W, Pyle, A.M.
Deposit date:2023-02-17
Release date:2023-11-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:The E3 ligase Riplet promotes RIG-I signaling independent of RIG-I oligomerization.
Nat Commun, 14, 2023

223532

PDB entries from 2024-08-07

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