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6DCC
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BU of 6dcc by Molmil
Structure of methylphosphate capping enzyme methyltransferase domain in complex with 5' end of 7SK RNA
Descriptor: 7SK snRNA methylphosphate capping enzyme, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ...
Authors:Yang, Y, Eichhorn, C, Cascio, D, Feigon, J.
Deposit date:2018-05-04
Release date:2018-12-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of 7SK RNA 5'-gamma-phosphate methylation and retention by MePCE.
Nat. Chem. Biol., 15, 2019
6DCJ
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BU of 6dcj by Molmil
LpoA N-terminal domain from Haemophilus influenzae; monoclinic form at 1.35 A resolution
Descriptor: CHLORIDE ION, Penicillin-binding protein activator LpoA
Authors:Vijayalakshmi, J, Saper, M.A.
Deposit date:2018-05-07
Release date:2019-05-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structures of the amino-terminal domain of LpoA from Escherichia coli and Haemophilus influenzae.
Acta Crystallogr.,Sect.F, 75, 2019
6DD0
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BU of 6dd0 by Molmil
Crystal structure of VIM-2 complexed with compound 8
Descriptor: ACETATE ION, Beta-lactamase class B VIM-2, ZINC ION, ...
Authors:Pemberton, O.A, Chen, Y.
Deposit date:2018-05-08
Release date:2019-05-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases.
J.Med.Chem., 62, 2019
6DPD
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BU of 6dpd by Molmil
Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 16 mM Mn2+ and 200 mM K+ for 40 s at 21 C
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*AP*TP*GP*T)-3'), GLYCEROL, ...
Authors:Samara, N.L, Yang, W.
Deposit date:2018-06-09
Release date:2018-08-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol., 25, 2018
6DDM
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BU of 6ddm by Molmil
Crystal Structure Analysis of the Epitope of an Anti-MICA Antibody
Descriptor: Anti-MICA Fab fragment heavy chain clone 1D5, Anti-MICA Fab fragment light chain clone 1D5, MHC class I polypeptide-related sequence A
Authors:Matsumoto, M.L.
Deposit date:2018-05-10
Release date:2018-10-24
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High-resolution glycosylation site-engineering method identifies MICA epitope critical for shedding inhibition activity of anti-MICA antibodies.
MAbs, 11, 2019
6DDV
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BU of 6ddv by Molmil
Crystal Structure Analysis of the Epitope of an Anti-MICA Antibody
Descriptor: Anti-MICA Fab fragment heavy chain clone 6E1, Anti-MICA Fab fragment light chain clone 6E1, MHC class I chain-related protein A
Authors:Matsumoto, M.L.
Deposit date:2018-05-10
Release date:2018-10-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:High-resolution glycosylation site-engineering method identifies MICA epitope critical for shedding inhibition activity of anti-MICA antibodies.
MAbs, 11, 2019
6DPS
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BU of 6dps by Molmil
Crystal Structure of Neisseria meningitidis DsbD n-terminal domain in the oxidised form
Descriptor: Thiol:disulfide interchange protein DsbD, ZINC ION
Authors:Heras, B, Smith, R.P, Paxman, J.J.
Deposit date:2018-06-09
Release date:2018-09-12
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.556 Å)
Cite:Structural and biochemical insights into the disulfide reductase mechanism of DsbD, an essential enzyme for neisserial pathogens.
J. Biol. Chem., 293, 2018
6DQY
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BU of 6dqy by Molmil
Crystal Structure analysis of Superoxide Dismutase from Trichoderma reesei
Descriptor: MANGANESE (II) ION, Superoxide dismutase
Authors:Mendoza, E.R, Stelmastchuk, L.B.F, Ferreira Junior, J.R.S, Garratt, R.C.
Deposit date:2018-06-11
Release date:2018-12-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Superoxide Dismutase from Trichoderma reesei
To Be Published
6DSI
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BU of 6dsi by Molmil
Anti recombinant prolactin receptor scFv
Descriptor: Anti-TN-C scFv
Authors:Langley, D.B, Rouet, R, Christ, D.
Deposit date:2018-06-14
Release date:2019-06-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Anti recombinant prolactin receptor scFv
To Be Published
6DTC
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BU of 6dtc by Molmil
Dihydrofolate Reductase (DHFR) of Aspergillus flavus in complex with a small molecule inhibitor
Descriptor: (3R)-3-methyl-4-[3-(1H-tetrazol-5-yl)phenoxy]-2,3-dihydrofuro[2,3-f]quinazoline-7,9-diamine, Dihydrofolate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Bensen, D.C, Fortier, J.M, Akers-Rodriguez, S, Tari, L.W.
Deposit date:2018-06-15
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Prospecting for broad-spectrum inhibitors of fungal dihydrofolate reductase using a structure guided approach.
To be published
6DGS
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BU of 6dgs by Molmil
Crystal Structure of Leishmania major dihydroorotate dehydrogenase mutant Y142A
Descriptor: Dihydroorotate dehydrogenase (fumarate), FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Reis, R.A.G, Pinheiro, M.P, Nonato, M.C.
Deposit date:2018-05-18
Release date:2019-05-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of Leishmania major dihydroorotate dehydrogenase mutant Y142A
To Be Published
6DTI
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BU of 6dti by Molmil
Structure of the Thermus thermophilus 30S ribosomal subunit complexed with an unmodifed anticodon stem loop (ASL) of Escherichia coli transfer RNA Arginine 2 (TRNAARG2) bound to an mRNA with an CGU-codon in the A-site and paromomycin
Descriptor: 16s rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Cantara, W.A, DeMirci, H, Agris, P.F.
Deposit date:2018-06-16
Release date:2019-04-24
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.54 Å)
Cite:A Structural Basis for Restricted Codon Recognition Mediated by 2-thiocytidine in tRNA Containing a Wobble Position Inosine.
J.Mol.Biol., 432, 2020
6DHH
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BU of 6dhh by Molmil
RT XFEL structure of Photosystem II 400 microseconds after the second illumination at 2.2 Angstrom resolution
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Kern, J, Chatterjee, R, Young, I.D, Fuller, F.D, Lassalle, L, Ibrahim, M, Gul, S, Fransson, T, Brewster, A.S, Alonso-Mori, R, Hussein, R, Zhang, M, Douthit, L, de Lichtenberg, C, Cheah, M.H, Shevela, D, Wersig, J, Seufert, I, Sokaras, D, Pastor, E, Weninger, C, Kroll, T, Sierra, R.G, Aller, P, Butryn, A, Orville, A.M, Liang, M, Batyuk, A, Koglin, J.E, Carbajo, S, Boutet, S, Moriarty, N.W, Holton, J.M, Dobbek, H, Adams, P.D, Bergmann, U, Sauter, N.K, Zouni, A, Messinger, J, Yano, J, Yachandra, V.K.
Deposit date:2018-05-20
Release date:2018-11-21
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of the intermediates of Kok's photosynthetic water oxidation clock.
Nature, 563, 2018
7S2S
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BU of 7s2s by Molmil
nanobody bound to Interleukin-2Rbeta
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, IL2Rb-binding nanobody, Interleukin-2 receptor subunit beta, ...
Authors:Glassman, C.R, Jude, K.M, Yen, M, Garcia, K.C.
Deposit date:2021-09-03
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Facile discovery of surrogate cytokine agonists.
Cell, 185, 2022
7S2R
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BU of 7s2r by Molmil
nanobody bound to IL-2Rg
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cytokine receptor common subunit gamma, ...
Authors:Glassman, C.R, Jude, K.M, Yen, M, Garcia, K.C.
Deposit date:2021-09-03
Release date:2022-03-30
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Facile discovery of surrogate cytokine agonists.
Cell, 185, 2022
5LXS
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BU of 5lxs by Molmil
Tubulin-KS-1-199-32 complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Prota, A.E, Steinmetz, M.O.
Deposit date:2016-09-22
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis of Microtubule Stabilization by Discodermolide.
Chembiochem, 18, 2017
8OXD
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BU of 8oxd by Molmil
Structure of the human LYVE-1 (lymphatic vessel endothelial receptor-1) hyaluronan binding domain bound with decasaccharide hyaluronan.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid, Lymphatic vessel endothelial hyaluronic acid receptor 1
Authors:Ni, T, Banerji, N, Jackson, D.J, Gilbert, R.J.C.
Deposit date:2023-05-01
Release date:2024-11-13
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structure of the murine LYVE-1 (lymphatic vessel endothelial receptor-1) hyaluronan binding domain in an unliganded state
Nature Communications, 2025
5LFW
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BU of 5lfw by Molmil
Lambda-[Ru(phen)2(dppz)]2+ bound to a short substituted DNA sequence
Descriptor: BARIUM ION, DNA (5'-D(*(CBR)P*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*G)-3'), ...
Authors:Hall, J.P, Cardin, C.J.
Deposit date:2016-07-04
Release date:2017-02-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Guanine Can Direct Binding Specificity of Ru-dipyridophenazine (dppz) Complexes to DNA through Steric Effects.
Chemistry, 23, 2017
1E1C
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BU of 1e1c by Molmil
METHYLMALONYL-COA MUTASE H244A Mutant
Descriptor: COBALAMIN, DESULFO-COENZYME A, METHYLMALONYL-COA MUTASE ALPHA CHAIN, ...
Authors:Evans, P.R, Thoma, N.H.
Deposit date:2000-04-30
Release date:2000-05-07
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Protection of Radical Intermediates at the Active Site of Adenosylcobalamin-Dependent Methylmalonyl-Coa Mutase
Biochemistry, 39, 2000
5LFZ
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BU of 5lfz by Molmil
T48 deacetylase
Descriptor: ArCE4A, NICKEL (II) ION
Authors:Rothweiler, U.
Deposit date:2016-07-05
Release date:2017-08-02
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.561 Å)
Cite:Structure and function of a CE4 deacetylase isolated from a marine environment.
PLoS ONE, 12, 2017
1DVG
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BU of 1dvg by Molmil
CRYSTAL STRUCTURE OF RAT HEME OXYGENASE-1 IN COMPLEX WITH HEME; SELELENO-METHIONINE DERIVATIVE, MUTATED AT M51T,M93L,M155L,M191L.
Descriptor: HEME OXYGENASE-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sugishima, M, Omata, Y, Kakuta, Y, Sakamoto, H, Noguchi, M, Fukuyama, K.
Deposit date:2000-01-20
Release date:2000-04-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of rat heme oxygenase-1 in complex with heme.
FEBS Lett., 471, 2000
1DQX
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BU of 1dqx by Molmil
CRYSTAL STRUCTURE OF OROTIDINE 5'-PHOSPHATE DECARBOXYLASE COMPLEXED TO 6-HYDROXYURIDINE 5'-PHOSPHATE (BMP)
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, OROTIDINE 5'-PHOSPHATE DECARBOXYLASE
Authors:Milburn, M.V, Miller, B.G, Hassell, A.M, Wolfenden, R, Short, S.A.
Deposit date:2000-01-05
Release date:2000-03-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Anatomy of a proficient enzyme: the structure of orotidine 5'-monophosphate decarboxylase in the presence and absence of a potential transition state analog.
Proc.Natl.Acad.Sci.USA, 97, 2000
5LZH
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BU of 5lzh by Molmil
Cholera toxin classical B-pentamer in complex with inhibitor PC262
Descriptor: (2~{R},4~{S},5~{R},6~{R})-5-acetamido-2-[4-[3-[2-[(2~{S},3~{R},4~{R},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]ethylamino]-3-oxidanylidene-propyl]-1,2,3-triazol-1-yl]-4-oxidanyl-6-[(1~{R},2~{R})-1,2,3-tris(oxidanyl)propyl]oxane-2-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Heggelund, J.E, Martinsen, T, Krengel, U.
Deposit date:2016-09-29
Release date:2017-05-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Towards new cholera prophylactics and treatment: Crystal structures of bacterial enterotoxins in complex with GM1 mimics.
Sci Rep, 7, 2017
1DS8
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BU of 1ds8 by Molmil
PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER SPHAEROIDES IN THE CHARGE-NEUTRAL DQAQB STATE WITH THE PROTON TRANSFER INHIBITOR CD2+
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CADMIUM ION, ...
Authors:Axelrod, H.L, Abresch, E.C, Paddock, M.L, Okamura, M.Y, Feher, G.
Deposit date:2000-01-07
Release date:2000-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Determination of the binding sites of the proton transfer inhibitors Cd2+ and Zn2+ in bacterial reaction centers.
Proc.Natl.Acad.Sci.USA, 97, 2000
1DVL
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BU of 1dvl by Molmil
CRYSTAL STRUCTURE OF THE 1:1 NETROPSIN-DECAMER D(CCIICICCII)2 COMPLEX WITH ONLY ONE DRUG BOUND AT ONE END
Descriptor: 5'-D(*CP*CP*IP*IP*CP*IP*CP*CP*IP*I)-3', NETROPSIN
Authors:Shi, K, Mitra, S.N, Sundaralingam, M.
Deposit date:2000-01-21
Release date:2002-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the 1:1 netropsin-decamer d(CCIICICCII)2 complex with a single bound netropsin.
Acta Crystallogr.,Sect.D, 58, 2002

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