Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3MKJ
DownloadVisualize
BU of 3mkj by Molmil
Methionine gamma-lyase from Citrobacter freundii with pyridoximine-5'-phosphate
Descriptor: Methionine gamma-lyase, [5-hydroxy-4-(iminomethyl)-6-methyl-pyridin-3-yl]methyl dihydrogen phosphate
Authors:Revtovich, S.V, Nikulin, A.D, Morozova, E.A, Demidkina, T.V.
Deposit date:2010-04-15
Release date:2010-08-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Exploring methionine gamma-lyase structure-function relationship via microspectrophotometry and X-ray crystallography
Biochim.Biophys.Acta, 1814, 2011
4V7P
DownloadVisualize
BU of 4v7p by Molmil
Recognition of the amber stop codon by release factor RF1.
Descriptor: 16S rRNA (1504-MER), 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Korostelev, A, Zhu, J, Asahara, H, Noller, H.F.
Deposit date:2010-04-29
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.62 Å)
Cite:Recognition of the amber UAG stop codon by release factor RF1.
Embo J., 29, 2010
6EDD
DownloadVisualize
BU of 6edd by Molmil
Crystal structure of a GNAT Superfamily PA3944 acetyltransferase in complex with CoA (P1 space group)
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Acetyltransferase PA3944, ...
Authors:Czub, M.P, Porebski, P.J, Majorek, K.A, Satchell, K.J, Joachimiak, A, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-08-09
Release date:2018-08-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A Gcn5-Related N-Acetyltransferase (GNAT) Capable of Acetylating Polymyxin B and Colistin Antibiotics in Vitro.
Biochemistry, 57, 2018
7O56
DownloadVisualize
BU of 7o56 by Molmil
X-ray Structure of Interferon Regulatory Factor 4 DNA binding domain bound to an interferon-stimulated response element solved by Phosphorus and Sulphur SAD methods
Descriptor: DNA (5'-D(P*AP*AP*TP*AP*AP*AP*AP*GP*AP*AP*AP*CP*CP*GP*AP*AP*AP*GP*TP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*AP*CP*TP*TP*TP*CP*GP*GP*TP*TP*TP*CP*TP*TP*TP*TP*AP*T)-3'), Interferon regulatory factor 4
Authors:El Omari, K, Agnarelli, A, Duman, R, Wagner, A, Mancini, E.J.
Deposit date:2021-04-07
Release date:2021-05-12
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Phosphorus and sulfur SAD phasing of the nucleic acid-bound DNA-binding domain of interferon regulatory factor 4.
Acta Crystallogr.,Sect.F, 77, 2021
4V9N
DownloadVisualize
BU of 4v9n by Molmil
Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.
Descriptor: 16S rRNA (1504-MER), 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Santos, N, Zhu, J, Donohue, J.P, Korostelev, A.A, Noller, H.F.
Deposit date:2013-04-26
Release date:2014-07-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal Structure of the 70S Ribosome Bound with the Q253P Mutant Form of Release Factor RF2.
Structure, 21, 2013
4V85
DownloadVisualize
BU of 4v85 by Molmil
Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Zhou, J, Lancaster, L, Trakhanov, S, Noller, H.F.
Deposit date:2011-06-13
Release date:2014-07-09
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of release factor RF3 trapped in the GTP state on a rotated conformation of the ribosome.
Rna, 18, 2012
4V89
DownloadVisualize
BU of 4v89 by Molmil
Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Zhou, J, Lancaster, L, Trakhanov, S, Noller, H.F.
Deposit date:2011-11-17
Release date:2014-07-09
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Crystal structure of release factor RF3 trapped in the GTP state on a rotated conformation of the ribosome.
Rna, 18, 2012
7U2E
DownloadVisualize
BU of 7u2e by Molmil
Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody ADI-55688
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADI-55688 heavy chain, ADI-55688 light chain, ...
Authors:Yuan, M, Zhu, X, Wilson, I.A.
Deposit date:2022-02-23
Release date:2022-05-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:A broad and potent neutralization epitope in SARS-related coronaviruses.
Proc.Natl.Acad.Sci.USA, 119, 2022
7U2D
DownloadVisualize
BU of 7u2d by Molmil
Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody ADG20
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADG20 heavy chain, ADG20 light chain, ...
Authors:Zhu, X, Yuan, M, Wilson, I.A.
Deposit date:2022-02-23
Release date:2022-05-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:A broad and potent neutralization epitope in SARS-related coronaviruses.
Proc.Natl.Acad.Sci.USA, 119, 2022
5BVL
DownloadVisualize
BU of 5bvl by Molmil
Crystal structure of a de novo designed TIM-barrel
Descriptor: designed TIM barrel sTIM11
Authors:Feldmeier, K, Hocker, B.
Deposit date:2015-06-05
Release date:2015-11-18
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.992 Å)
Cite:De novo design of a four-fold symmetric TIM-barrel protein with atomic-level accuracy.
Nat.Chem.Biol., 12, 2016
4V67
DownloadVisualize
BU of 4v67 by Molmil
Crystal structure of a translation termination complex formed with release factor RF2.
Descriptor: 16S RRNA, 23S RRNA, 30S ribosomal protein S10, ...
Authors:Korostelev, A, Asahara, H, Lancaster, L, Laurberg, M, Hirschi, A, Noller, H.F.
Deposit date:2008-10-27
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of a translation termination complex formed with release factor RF2.
Proc.Natl.Acad.Sci.USA, 105, 2008
6I3Y
DownloadVisualize
BU of 6i3y by Molmil
Crystal structure of the human mitochondrial PRELID1K58V-TRIAP1 complex with PS
Descriptor: DODECYL-BETA-D-MALTOSIDE, O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine, PRELI domain-containing protein 1, ...
Authors:Miliara, X, Berry, J.-L, Morgan, R.M.L, Matthews, S.J.
Deposit date:2018-11-08
Release date:2019-03-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Structural determinants of lipid specificity within Ups/PRELI lipid transfer proteins.
Nat Commun, 10, 2019
6I4Y
DownloadVisualize
BU of 6i4y by Molmil
X-ray structure of the human mitochondrial PRELID3b-TRIAP1 complex
Descriptor: Maltose transport system, substrate-binding protein,TP53-regulated inhibitor of apoptosis 1, PRELI domain containing protein 3B, ...
Authors:Miliara, X, Berry, J.-L, Morgan, R.M.L, Matthews, S.J.
Deposit date:2018-11-12
Release date:2019-03-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Structural determinants of lipid specificity within Ups/PRELI lipid transfer proteins.
Nat Commun, 10, 2019
2E9L
DownloadVisualize
BU of 2e9l by Molmil
Crystal Structure of human Cytosolic Neutral beta-Glycosylceramidase (Klotho-related Prote:KLrP) complex with Glucose and fatty acids
Descriptor: Cytosolic beta-glucosidase, GLYCEROL, OLEIC ACID, ...
Authors:Kakuta, Y, Hayashi, Y, Okino, N, Ito, M.
Deposit date:2007-01-25
Release date:2007-09-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Klotho-related protein is a novel cytosolic neutral beta-glycosylceramidase.
J.Biol.Chem., 282, 2007
2E9M
DownloadVisualize
BU of 2e9m by Molmil
Crystal Structure of human Cytosolic Neutral beta-Glycosylceramidase (Klotho-related Prote:KLrP) complex with Galactose and fatty acids
Descriptor: Cytosolic beta-glucosidase, OLEIC ACID, PALMITIC ACID, ...
Authors:Kakuta, Y, Hayashi, Y, Okino, N, Ito, M.
Deposit date:2007-01-25
Release date:2007-09-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Klotho-related protein is a novel cytosolic neutral beta-glycosylceramidase.
J.Biol.Chem., 282, 2007
7R5O
DownloadVisualize
BU of 7r5o by Molmil
1.58 A STRUCTURE OF HUMAN APOFERRITIN OBTAINED FROM TITAN KRIOS 2 AT eBIC, DLS UNDER COMMISSIONING SESSION CM26464-2
Descriptor: Ferritin heavy chain, N-terminally processed, SODIUM ION
Authors:Clare, D.K.
Deposit date:2022-02-11
Release date:2022-06-22
Last modified:2023-07-05
Method:ELECTRON MICROSCOPY (1.6 Å)
Cite:Application of super-resolution and correlative double sampling in cryo-electron microscopy.
Faraday Disc.Chem.Soc, 240, 2022
7UUP
DownloadVisualize
BU of 7uup by Molmil
SARS-CoV-2 Main Protease S144A (Mpro S144A) in Complex with Nirmatrelvir (PF-07321332)
Descriptor: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5, CHLORIDE ION
Authors:Westberg, M, Fernandez, D, Lin, M.Z.
Deposit date:2022-04-28
Release date:2023-10-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:An orally bioavailable SARS-CoV-2 main protease inhibitor exhibits improved affinity and reduced sensitivity to mutations.
Sci Transl Med, 16, 2024
4HKS
DownloadVisualize
BU of 4hks by Molmil
Calcium release-activated calcium (CRAC) channel ORAI, K163W mutant
Descriptor: CALCIUM ION, Calcium release-activated calcium channel protein 1, ZINC ION
Authors:Long, S.B, Hou, X.
Deposit date:2012-10-15
Release date:2012-11-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.3516 Å)
Cite:Crystal structure of the calcium release-activated calcium channel Orai.
Science, 338, 2012
4HKR
DownloadVisualize
BU of 4hkr by Molmil
Calcium release-activated calcium (CRAC) channel ORAI
Descriptor: BARIUM ION, Calcium release-activated calcium channel protein 1, FE (III) ION, ...
Authors:Long, S.B, Hou, X.
Deposit date:2012-10-15
Release date:2012-11-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.3511 Å)
Cite:Crystal structure of the calcium release-activated calcium channel Orai.
Science, 338, 2012
1B41
DownloadVisualize
BU of 1b41 by Molmil
HUMAN ACETYLCHOLINESTERASE COMPLEXED WITH FASCICULIN-II, GLYCOSYLATED PROTEIN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, ...
Authors:Kryger, G, Harel, M, Shafferman, A, Silman, I, Sussman, J.L.
Deposit date:1999-01-05
Release date:2001-01-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Structures of recombinant native and E202Q mutant human acetylcholinesterase complexed with the snake-venom toxin fasciculin-II.
Acta Crystallogr.,Sect.D, 56, 2000
3Q2U
DownloadVisualize
BU of 3q2u by Molmil
Structure of Human Glioma Pathogenesis-related Protein 1 Reveals Unique loops and surface motifs.
Descriptor: GLYCEROL, Glioma pathogenesis-related protein 1
Authors:Asojo, O.A.
Deposit date:2010-12-20
Release date:2011-10-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural studies of human glioma pathogenesis-related protein 1.
Acta Crystallogr.,Sect.D, 67, 2011
2GP7
DownloadVisualize
BU of 2gp7 by Molmil
Estrogen Related Receptor-gamma ligand binding domain
Descriptor: CALCIUM ION, Estrogen-related receptor gamma
Authors:Wang, L, Zuercher, W.J, Consler, T.G, Lambert, M.H, Miller, A.B, Osband-miller, L.A, McKee, D.D, Willson, T.M, Nolte, R.T.
Deposit date:2006-04-17
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:X-ray crystal structures of the estrogen-related receptor-gamma ligand binding domain in three functional states reveal the molecular basis of small molecule regulation.
J.Biol.Chem., 281, 2006
2VDY
DownloadVisualize
BU of 2vdy by Molmil
Crystal structure of the reactive loop cleaved Corticosteroid Binding Globulin complexed with Cortisol
Descriptor: (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione, CORTICOSTEROID-BINDING GLOBULIN
Authors:Zhou, A, Wei, Z, Read, R.J.
Deposit date:2007-10-13
Release date:2008-05-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The S-to-R Transition of Corticosteroid-Binding Globulin and the Mechanism of Hormone Release.
J.Mol.Biol., 380, 2008
4S2M
DownloadVisualize
BU of 4s2m by Molmil
Crystal Structure of OXA-163 complexed with iodide in the active site
Descriptor: Beta-lactamase, IODIDE ION
Authors:Stojanoski, V, Hu, L, Palzkill, T.G, Prasad, B.
Deposit date:2015-01-21
Release date:2015-07-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Structural Basis for Different Substrate Profiles of Two Closely Related Class D beta-Lactamases and Their Inhibition by Halogens.
Biochemistry, 54, 2015
2VDX
DownloadVisualize
BU of 2vdx by Molmil
Crystal Structure of the reactive loop Cleaved Corticosteroid Binding Globulin
Descriptor: CORTICOSTEROID-BINDING GLOBULIN, SODIUM ION
Authors:Zhou, A, Wei, Z, Read, R.J.
Deposit date:2007-10-13
Release date:2008-05-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:The S-to-R Transition of Corticosteroid-Binding Globulin and the Mechanism of Hormone Release.
J.Mol.Biol., 380, 2008

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon