Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7WJ2
DownloadVisualize
BU of 7wj2 by Molmil
Crystal structure of HLA-C*1402 complexed with 8-mer HIV gag peptide
Descriptor: 1,2-ETHANEDIOL, 8-mer peptide, ACETATE ION, ...
Authors:Kuroha, J, Morita, D, Asa, M, Sugita, M.
Deposit date:2022-01-05
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Crystal structures of N-myristoylated lipopeptide-bound HLA class I complexes indicate reorganization of B-pocket architecture upon ligand binding.
J.Biol.Chem., 298, 2022
6UCF
DownloadVisualize
BU of 6ucf by Molmil
N123-VRC34_pI4 HIV neutralizing antibody in complex with HIV fusion peptide residue 512-519
Descriptor: HIV fusion peptide, N123-VRC34_pI4 heavy chain, N123-VRC34_pI4 light chain
Authors:Xu, K, Kwong, P.D.
Deposit date:2019-09-16
Release date:2020-03-18
Last modified:2020-04-22
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:VRC34-Antibody Lineage Development Reveals How a Required Rare Mutation Shapes the Maturation of a Broad HIV-Neutralizing Lineage.
Cell Host Microbe, 27, 2020
3TV3
DownloadVisualize
BU of 3tv3 by Molmil
Crystal structure of broad and potent HIV-1 neutralizing antibody PGT128 in complex with Man9
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AMYLAMINE, GLYCEROL, ...
Authors:Pejchal, R, Wilson, I.A.
Deposit date:2011-09-19
Release date:2011-10-19
Last modified:2021-04-28
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:A potent and broad neutralizing antibody recognizes and penetrates the HIV glycan shield.
Science, 334, 2011
3LN4
DownloadVisualize
BU of 3ln4 by Molmil
Crystal structure of HLA-B*4103 in complex with a 16mer self-peptide derived from heterogeneous nuclear ribonucleoproteins C1/C2
Descriptor: 16-mer peptide from Heterogeneous nuclear ribonucleoproteins C1/C2, ACETATE ION, Beta-2-microglobulin, ...
Authors:Theodossis, A, Gras, S, Rossjohn, J.
Deposit date:2010-02-01
Release date:2010-10-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.296 Å)
Cite:The impact of human leukocyte antigen (HLA) micropolymorphism on ligand specificity within the HLA-B*41 allotypic family
Haematologica, 96, 2011
1NCW
DownloadVisualize
BU of 1ncw by Molmil
Cationic Cyclization Antibody 4C6 in Complex with Benzoic Acid
Descriptor: BENZOIC ACID, GLYCEROL, IMMUNOGLOBULIN IGG2A
Authors:Zhu, X, Wilson, I.A.
Deposit date:2002-12-05
Release date:2003-05-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Basis for Antibody Catalysis of a Cationic Cyclization Reaction
J.Mol.Biol., 329, 2003
6DDM
DownloadVisualize
BU of 6ddm by Molmil
Crystal Structure Analysis of the Epitope of an Anti-MICA Antibody
Descriptor: Anti-MICA Fab fragment heavy chain clone 1D5, Anti-MICA Fab fragment light chain clone 1D5, MHC class I polypeptide-related sequence A
Authors:Matsumoto, M.L.
Deposit date:2018-05-10
Release date:2018-10-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High-resolution glycosylation site-engineering method identifies MICA epitope critical for shedding inhibition activity of anti-MICA antibodies.
MAbs, 11, 2019
6V2P
DownloadVisualize
BU of 6v2p by Molmil
HLA-B*57:03 presenting the peptide ASLNLPAVSW
Descriptor: ACETATE ION, Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, ...
Authors:Maclachlan, B, Rossjohn, J, Vivian, J.P.
Deposit date:2019-11-25
Release date:2020-05-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The molecular basis of how buried human leukocyte antigen polymorphism modulates natural killer cell function.
Proc.Natl.Acad.Sci.USA, 117, 2020
3MRG
DownloadVisualize
BU of 3mrg by Molmil
Crystal Structure of MHC class I HLA-A2 molecule complexed with HCV NS3-1073-1081 nonapeptide
Descriptor: 9-meric peptide from Serine protease/NTPase/helicase NS3, Beta-2-microglobulin, CITRIC ACID, ...
Authors:Gras, S, Reiser, J.-B, Echasserieau, K, Saulquin, X, Bonneville, M, Housset, D.
Deposit date:2010-04-29
Release date:2011-05-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Analysis of Relationships between Peptide/MHC Structural Features and Naive T Cell Frequency in Humans.
J.Immunol., 193, 2014
3D25
DownloadVisualize
BU of 3d25 by Molmil
Crystal structure of HA-1 minor histocompatibility antigen bound to human class I MHC HLA-A2
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
Authors:Nicholls, S, Piper, K.P, Mohammed, F, Dafforn, T.R, Tenzer, S, Salim, M, Mahendra, P, Craddock, C, van Endert, P, Schild, H, Cobbold, M, Engelhard, V.H, Moss, P.A.H, Willcox, B.E.
Deposit date:2008-05-07
Release date:2009-02-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Secondary anchor polymorphism in the HA-1 minor histocompatibility antigen critically affects MHC stability and TCR recognition
Proc.Natl.Acad.Sci.USA, 106, 2009
3SPV
DownloadVisualize
BU of 3spv by Molmil
Crystal structure of a peptide-HLA complex
Descriptor: ACETATE ION, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Gras, S, Rossjohn, J.
Deposit date:2011-07-04
Release date:2012-07-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of a peptide-HLA complex
To be Published
3BWA
DownloadVisualize
BU of 3bwa by Molmil
Crystal Structure of HLA B*3508 in complex with a HCMV 8-mer peptide from the pp65 protein
Descriptor: Beta-2-microglobulin, FPT peptide from 65 kDa lower matrix phosphoprotein, HLA class I histocompatibility antigen, ...
Authors:Wynn, K.K, Marland, Z, Cooper, L, Silins, S.L, Gras, S, Archbold, J.K, Tynan, F.E, Miles, J.J, McCluskey, J, Burrows, S.R, Rossjohn, J, Khanna, R.
Deposit date:2008-01-08
Release date:2008-04-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Impact of clonal competition for peptide-MHC complexes on the CD8+ T-cell repertoire selection in a persistent viral infection
Blood, 111, 2008
4JVU
DownloadVisualize
BU of 4jvu by Molmil
IgM C2-domain from mouse
Descriptor: Ig mu chain C region membrane-bound form
Authors:Mueller, R, Graewert, A.M, Kern, T, Madl, T, Peschek, J, Sattler, M, Groll, M, Buchner, J.
Deposit date:2013-03-26
Release date:2013-06-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High-resolution structures of the IgM Fc domains reveal principles of its hexamer formation.
Proc.Natl.Acad.Sci.USA, 110, 2013
7WZZ
DownloadVisualize
BU of 7wzz by Molmil
Crystal structure of peptide KAGQVVTIW in complex with HLA-B5801
Descriptor: Beta-2-microglobulin, GLYCEROL, LYS-ALA-GLY-GLN-VAL-VAL-THR-ILE-TRP, ...
Authors:Huan, X, Ren, E.C.
Deposit date:2022-02-20
Release date:2023-05-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.305 Å)
Cite:Allopurinol non-covalently facilitates binding of unconventional peptides to HLA-B*58:01.
Sci Rep, 13, 2023
6MT6
DownloadVisualize
BU of 6mt6 by Molmil
Crystal Structure of HLA-B*37:01 in complex with NP338 influenza peptide
Descriptor: ACETATE ION, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Gras, S.
Deposit date:2018-10-19
Release date:2019-02-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Broad CD8+T cell cross-recognition of distinct influenza A strains in humans.
Nat Commun, 9, 2018
3P73
DownloadVisualize
BU of 3p73 by Molmil
Crystal Structures of the Chicken YF1*7.1 molecule
Descriptor: ACETATE ION, Beta-2-microglobulin, CETYL-TRIMETHYL-AMMONIUM, ...
Authors:Hee, C.S, Gao, S, Loll, B, Miller, M.M, Uchanska-Ziegler, B, Daumke, O, Ziegler, A.
Deposit date:2010-10-12
Release date:2010-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structure of a Classical MHC Class I Molecule That Binds "Non-Classical" Ligands.
Plos Biol., 8, 2010
5NI9
DownloadVisualize
BU of 5ni9 by Molmil
Crystal structure of HLA-DRB1*04:01 with the alpha-enolase peptide 326-340
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, Alpha-enolase, ...
Authors:Gerstner, C, Dubnovitsky, A.
Deposit date:2017-03-23
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Memory T cells specific to citrullinated alpha-enolase are enriched in the rheumatic joint.
J. Autoimmun., 92, 2018
4X5W
DownloadVisualize
BU of 4x5w by Molmil
HLA-DR1 with CLIP102-120(M107W)
Descriptor: HLA class II histocompatibility antigen gamma chain, HLA class II histocompatibility antigen, DR alpha chain, ...
Authors:Guenther, S, Freund, C.
Deposit date:2014-12-06
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:MHC class II complexes sample intermediate states along the peptide exchange pathway.
Nat Commun, 7, 2016
7KGQ
DownloadVisualize
BU of 7kgq by Molmil
Crystal Structure of HLA-A*0201in complex with SARS-CoV-2 N222-230
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, CADMIUM ION, ...
Authors:Szeto, C, Chatzileontiadou, D.S.M, Riboldi-Tunnicliffe, A, Gras, S.
Deposit date:2020-10-18
Release date:2021-01-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:The presentation of SARS-CoV-2 peptides by the common HLA-A * 02:01 molecule.
Iscience, 24, 2021
6TRN
DownloadVisualize
BU of 6trn by Molmil
Crystal structure of HLA A2*01-AVYDGREHTV
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, MAGE-A4 peptide (amino acids 230-239) variant, ...
Authors:Coles, C.H, McMurran, C, Lloyd, A, Hibbert, L, Lupardus, P.J, Cole, D.K, Harper, S.
Deposit date:2019-12-19
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:T cell receptor interactions with human leukocyte antigen govern indirect peptide selectivity for the cancer testis antigen MAGE-A4.
J.Biol.Chem., 295, 2020
2BVP
DownloadVisualize
BU of 2bvp by Molmil
Structures of Three HIV-1 HLA-B5703-Peptide Complexes and Identification of Related HLAs Potentially Associated with Long-Term Non-Progression
Descriptor: BETA-2-MICROGLOBULIN, HIV-P24, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ...
Authors:Stewart-Jones, G.B, Gillespie, G, Overton, I.M, Kaul, R, Roche, P, Mcmichael, A.J, Rowland-Jones, S, Jones, E.Y.
Deposit date:2005-07-01
Release date:2005-09-07
Last modified:2019-10-09
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structures of three HIV-1 HLA-B*5703-peptide complexes and identification of related HLAs potentially associated with long-term nonprogression.
J Immunol., 175, 2005
4UDT
DownloadVisualize
BU of 4udt by Molmil
T cell receptor (TRAV22,TRBV7-9) structure
Descriptor: GLYCEROL, PROTEIN TRBV7-9, T-CELL RECEPTOR BETA-2 CHAIN C REGION, ...
Authors:Rodstrom, K.E.J, Regenthal, P, Lindkvist-Petersson, K.
Deposit date:2014-12-11
Release date:2015-06-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of Staphylococcal Enterotoxin E in Complex with Tcr Defines the Role of Tcr Loop Positioning in Superantigen Recognition.
Plos One, 10, 2015
5NIG
DownloadVisualize
BU of 5nig by Molmil
Crystal structure of HLA-DRB1*04:01 with modified alpha-enolase peptide 326-340 (arginine 327 to citrulline)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Alpha-enolase, HLA class II histocompatibility antigen, ...
Authors:Gerstner, C, Dubnovitsky, A.
Deposit date:2017-03-24
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Memory T cells specific to citrullinated alpha-enolase are enriched in the rheumatic joint.
J. Autoimmun., 92, 2018
6MTL
DownloadVisualize
BU of 6mtl by Molmil
Crystal Structure of HLA-B*44:05 in complex with NP338 influenza peptide
Descriptor: ACETATE ION, Beta-2-microglobulin, MHC class I antigen, ...
Authors:Gras, S.
Deposit date:2018-10-19
Release date:2019-02-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Broad CD8+T cell cross-recognition of distinct influenza A strains in humans.
Nat Commun, 9, 2018
6JOZ
DownloadVisualize
BU of 6joz by Molmil
Crystal structure of BRLF peptide from EBV in complex with HLA-A1101.
Descriptor: ALA-THR-ILE-GLY-THR-ALA-MET-TYR-LYS, Beta-2-microglobulin, GLYCEROL, ...
Authors:Huan, X, Xiao, Z, Tadwal, V.S, Ren, E.C.
Deposit date:2019-03-25
Release date:2020-01-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of suboptimal viral fragments of Epstein Barr Virus Rta peptide-HLA complex that stimulate CD8 T cell response.
Sci Rep, 9, 2019
1LK2
DownloadVisualize
BU of 1lk2 by Molmil
1.35A crystal structure of H-2Kb complexed with the GNYSFYAL peptide
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Luz, J.G, Rudolph, M.G, Wilson, I.A, Eisen, H.
Deposit date:2002-04-23
Release date:2003-11-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A peptide that antagonizes TCR-mediated reactions with both syngeneic and allogeneic agonists: functional and structural aspects.
J.Immunol., 172, 2004

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon