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8B3E
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BU of 8b3e by Molmil
Variant Surface Glycoprotein VSG397
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Variant surface glycoprotein 397
Authors:Zeelen, J.P, Stebbins, C.E, Dakovic, S, Foti, K.
Deposit date:2022-09-16
Release date:2023-01-25
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Structural similarities between the metacyclic and bloodstream form variant surface glycoproteins of the African trypanosome.
Plos Negl Trop Dis, 17, 2023
8ZHB
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BU of 8zhb by Molmil
80S ribosome with A/A P/E tRNA and mRNA of WNV
Descriptor: 25S rRNA (3393-MER), 5.8S rRNA (158-MER), 5S rRNA (121-MER), ...
Authors:Wu, M, Yuan, S.
Deposit date:2024-05-10
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Flexibilities and conservations in the structural basis of viral -1 programmed ribosomal frameshifting
To Be Published
9AVB
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BU of 9avb by Molmil
Fis1 Wild type
Descriptor: CHLORIDE ION, Mitochondrial fission 1 protein
Authors:Mathews, I.I, Pokhrel, S, Wakatsuki, S.
Deposit date:2024-03-01
Release date:2025-05-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A hidden cysteine in Fis1 targeted to prevent excessive mitochondrial fission and dysfunction under oxidative stress.
Nat Commun, 16, 2025
5JJF
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BU of 5jjf by Molmil
Structure of the SRII/HtrII Complex in I212121 space group ("U" shape) - M state
Descriptor: EICOSANE, RETINAL, Sensory rhodopsin II transducer, ...
Authors:Ishchenko, A, Round, E, Borshchevskiy, V, Grudinin, S, Gushchin, I, Klare, J, Remeeva, A, Polovinkin, V, Utrobin, P, Balandin, T, Engelhard, M, Bueldt, G, Gordeliy, V.
Deposit date:2016-04-23
Release date:2017-02-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer Complex.
Sci Rep, 7, 2017
9AYD
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BU of 9ayd by Molmil
Mitochondrial fission 1 (Fis1) protein structure Y38E mutation 1.53A
Descriptor: ACETATE ION, Mitochondrial fission 1 protein, TRIETHYLENE GLYCOL
Authors:Mathews, I.I, Pokhrel, S, Wakatsuki, S.
Deposit date:2024-03-07
Release date:2025-05-21
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:A hidden cysteine in Fis1 targeted to prevent excessive mitochondrial fission and dysfunction under oxidative stress.
Nat Commun, 16, 2025
2I2D
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BU of 2i2d by Molmil
Crystal structure of LmNADK1
Descriptor: BIS{[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL} DIHYDROGEN DIPHOSPHATE, CITRIC ACID, Probable inorganic polyphosphate/ATP-NAD kinase 1
Authors:Poncet-Montange, G, Labesse, G.
Deposit date:2006-08-16
Release date:2007-08-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:NAD kinases use substrate-assisted catalysis for specific recognition of NAD.
J.Biol.Chem., 282, 2007
8I4T
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BU of 8i4t by Molmil
Structure of the asymmetric unit of SFTSV virion
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelopment polyprotein
Authors:Du, S, Peng, R, Qi, J, Li, C.
Deposit date:2023-01-21
Release date:2023-09-13
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:Cryo-EM structure of severe fever with thrombocytopenia syndrome virus.
Nat Commun, 14, 2023
2I30
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BU of 2i30 by Molmil
Human serum albumin complexed with myristate and salicylic acid
Descriptor: 2-HYDROXYBENZOIC ACID, MYRISTIC ACID, Serum albumin
Authors:Yang, F, Bian, C, Zhu, L, Zhao, G, Huang, Z, Huang, M.
Deposit date:2006-08-17
Release date:2006-12-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Effect of human serum albumin on drug metabolism: Structural evidence of esterase activity of human serum albumin
J.Struct.Biol., 157, 2007
8ZKA
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BU of 8zka by Molmil
Crystal structure of the Decarboxylase KDC4427 in complex with phenylpyruvic acid intermediate
Descriptor: 2-[(2~{E})-3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-2-(1-oxidanyl-2-phenyl-ethylidene)-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate, Indolepyruvate decarboxylase, MAGNESIUM ION
Authors:Dong, S, Liu, L, Zhang, H.
Deposit date:2024-05-15
Release date:2025-05-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of the Decarboxylase KDC4427 in complex with phenylpyruvic acid intermediate
To Be Published
8ZVQ
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BU of 8zvq by Molmil
Cryo-EM Structure of Human Hormone-sensitive Lipase (HSL)
Descriptor: Hormone-sensitive lipase
Authors:Peng, H, Xu, Q, Wu, J, Hu, Q.
Deposit date:2024-06-11
Release date:2025-04-23
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Molecular determinants for the association of human hormone-sensitive lipase with lipid droplets.
Nat Commun, 16, 2025
8ZTC
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BU of 8ztc by Molmil
Crystal structure of Mps1-AMP complex
Descriptor: ADENOSINE MONOPHOSPHATE, Mitogen-activated protein kinase MPS1
Authors:Kong, Z, Li, S, Zhang, X, Wang, D, Liu, J.
Deposit date:2024-06-07
Release date:2025-04-23
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Combinatorial Targeting of Common Docking and ATP Binding Sites on Mps1 MAPK for Management of Pathogenic Fungi.
J.Agric.Food Chem., 72, 2024
2I48
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BU of 2i48 by Molmil
Crystal structure of Bicarbonate Transport Protein CmpA from Synechocystis sp. PCC 6803 in complex with carbonic acid
Descriptor: Bicarbonate transporter, CARBONATE ION
Authors:Koropatkin, N.M, Smith, T.J, Pakrasi, H.B.
Deposit date:2006-08-21
Release date:2006-12-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA.
J.Biol.Chem., 282, 2007
8HND
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BU of 8hnd by Molmil
Cryo-EM structure of human OATP1B1 in complex with estrone-3-sulfate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Solute carrier organic anion transporter family member 1B1, ...
Authors:Shan, Z, Yang, X, Liu, H, Nan, J, Yuan, Y, Zhang, Y.
Deposit date:2022-12-07
Release date:2023-09-13
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Cryo-EM structures of human organic anion transporting polypeptide OATP1B1.
Cell Res., 33, 2023
5JJT
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BU of 5jjt by Molmil
Crystal structure of a type 5 serine/threonine protein phosphatase from Arabidopsis thaliana
Descriptor: NICKEL (II) ION, Serine/threonine-protein phosphatase 5
Authors:Li, H.M, Pu, H.
Deposit date:2016-04-25
Release date:2017-04-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Crystal structure of a type 5 serine/threonine protein phosphatase from Arabidopsis thaliana
To Be Published
8ZBB
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BU of 8zbb by Molmil
Cryo-EM structure of outward state Anhydromuropeptide permease (AmpG) G50W/L269W
Descriptor: Muropeptide transporter,Soluble cytochrome b562, anti-BRIL Fab Heavy chain, anti-BRIL Fab Light chain, ...
Authors:Yoo, Y, Chang, N, Kim, U, Kim, H, Cho, H.
Deposit date:2024-04-26
Release date:2025-04-30
Last modified:2025-06-11
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Cryo-EM structure of outward state Anhydromuropeptide permease (AmpG) G50W/L269W
To Be Published
5JK2
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BU of 5jk2 by Molmil
Crystal structure of Treponema pallidum Tp0751 (Pallilysin)
Descriptor: Tp0751
Authors:Parker, M.L, Boulanger, M.J.
Deposit date:2016-04-25
Release date:2016-10-12
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Structure of Treponema pallidum Tp0751 (Pallilysin) Reveals a Non-canonical Lipocalin Fold That Mediates Adhesion to Extracellular Matrix Components and Interactions with Host Cells.
Plos Pathog., 12, 2016
6KVP
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BU of 6kvp by Molmil
S. aureus FtsZ in complex with 3-(1-(5-bromo-4-(4-(trifluoromethyl)phenyl)oxazol-2-yl)ethoxy)-2,6-difluorobenzamide (compound 2)
Descriptor: 3-[(1R)-1-[5-bromanyl-4-[4-(trifluoromethyl)phenyl]-1,3-oxazol-2-yl]ethoxy]-2,6-bis(fluoranyl)benzamide, CALCIUM ION, Cell division protein FtsZ, ...
Authors:Ferrer-Gonzalez, E, Fujita, J, Yoshizawa, T, Nelson, J.M, Pilch, A.J, Hillman, E, Ozawa, M, Kuroda, N, Parhi, A.K, LaVoie, E.J, Matsumura, H, Pilch, D.S.
Deposit date:2019-09-05
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-Guided Design of a Fluorescent Probe for the Visualization of FtsZ in Clinically Important Gram-Positive and Gram-Negative Bacterial Pathogens.
Sci Rep, 9, 2019
8ZBC
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BU of 8zbc by Molmil
An acyltransferase with selective perhydrolytic activity
Descriptor: SGNH/GDSL hydrolase family protein
Authors:Yin, Z, Jing, W.
Deposit date:2024-04-26
Release date:2025-04-30
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:An acyltransferase with selective perhydrolytic activity
To Be Published
5JKD
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BU of 5jkd by Molmil
Crystal structure of human IZUMO1-JUNO complex (crystal form 2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Izumo sperm-egg fusion protein 1, ...
Authors:Ohto, U, Ishida, H, Shimizu, T.
Deposit date:2016-04-26
Release date:2016-06-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of IZUMO1-JUNO reveals sperm-oocyte recognition during mammalian fertilization
Nature, 534, 2016
8I91
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BU of 8i91 by Molmil
ACE2-SIT1 complex bound with proline
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Li, Y.N, Zhang, Y.Y, Shen, Y.P, Yan, R.H.
Deposit date:2023-02-06
Release date:2023-09-27
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insight into the substrate recognition and transport mechanism of amino acid transporter complex ACE2-B 0 AT1 and ACE2-SIT1.
Cell Discov, 9, 2023
8ZBI
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BU of 8zbi by Molmil
Cryo-EM structure of Somatostatin receptor 3 (SSTR3) with Gi1 complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Yun, J.H.
Deposit date:2024-04-26
Release date:2025-04-30
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:The structures of SSTR3 and SSTR5 provide insights into the specificity among somatostatin receptors
To Be Published
8ZBJ
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BU of 8zbj by Molmil
Cryo-EM structure of Somatostatin receptor 5 (SSTR5) with Gi1 complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Kim, Y, Yun, J.H.
Deposit date:2024-04-26
Release date:2025-04-30
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:The structure of SSTR3 and SSTR5 provide insights into the specificity among somatostatin receptos.
To Be Published
5JLA
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BU of 5jla by Molmil
Crystal Structure of Ribose-5-phosphate Isomerase from Brucella melitensis 16M
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative short-chain dehydrogenase/reductase
Authors:Seattle Structural Genomics Center for Infectious Disease, SSGCID, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2016-04-26
Release date:2016-05-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structure of putative short-chain dehdrogenase/reductase from Burkholderia xenovorans LB400 bound to NAD
to be published
2I4Z
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BU of 2i4z by Molmil
Crystal structure of the complex between PPARgamma and the partial agonist LT127 (ureidofibrate derivative). This structure has been obtained from crystals soaked for 6 hours.
Descriptor: (2S)-2-(4-{2-[1,3-BENZOXAZOL-2-YL(HEPTYL)AMINO]ETHYL}PHENOXY)-2-METHYLBUTANOIC ACID, Peroxisome proliferator-activated receptor gamma
Authors:Pochetti, G, Mazza, F.
Deposit date:2006-08-23
Release date:2007-04-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Insights into the mechanism of partial agonism: crystal structures of the peroxisome proliferator-activated receptor gamma ligand-binding domain in the complex with two enantiomeric ligands
J.Biol.Chem., 282, 2007
8ZRY
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BU of 8zry by Molmil
Structure of human ECHS1 in complex with Crotonoyl-CoA
Descriptor: Enoyl-CoA hydratase, mitochondrial, MAGNESIUM ION, ...
Authors:Su, G, Xu, Y, Chen, B, Ju, K, Sun, X, Jin, Y, Liu, D, Chen, H, Zhang, S, Luan, X.
Deposit date:2024-06-05
Release date:2025-04-30
Method:ELECTRON MICROSCOPY (2.23 Å)
Cite:Structural and biochemical mechanism of short-chain enoyl-CoA hydratase (ECHS1) substrate recognition.
Commun Biol, 8, 2025

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PDB entries from 2025-07-09

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