PDB: 60814 resultsInfo pagesStatus searchChemie searchBIRD

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8DQF	Crystal structure of Neisseria gonorrhoeae carbonic anhydrase with N-(5-sulfamoyl-1,3,4-thiadiazol-2-yl)cyclohexanecarboxamide Descriptor: Carbonic anhydrase, N-(5-sulfamoyl-1,3,4-thiadiazol-2-yl)cyclohexanecarboxamide, SULFATE ION, ... Authors: Marapaka, A.K, Das, C, Flaherty, D.P, Yadav, R. Deposit date: 2022-07-19 Release date: 2022-12-14 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structural Characterization of Thiadiazolesulfonamide Inhibitors Bound to Neisseria gonorrhoeae alpha-Carbonic Anhydrase. Acs Med.Chem.Lett., 14, 2023
7ASB	Crystal structure of dimeric chlorite dismutase variant Q74E (CCld Q74E) from Cyanothece sp. PCC7425 Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Chlorite dismutase, DI(HYDROXYETHYL)ETHER, ... Authors: Schmidt, D, Mlynek, G, Djinovic-Carugo, K, Obinger, C. Deposit date: 2020-10-27 Release date: 2021-02-17 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Arresting the Catalytic Arginine in Chlorite Dismutases: Impact on Heme Coordination, Thermal Stability, and Catalysis. Biochemistry, 60, 2021
8GK8	R21A Staphylococcus aureus pyruvate carboxylase Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, ACETYL COENZYME *A, COENZYME A, ... Authors: Laseke, A.J, St.Maurice, M. Deposit date: 2023-03-17 Release date: 2023-08-30 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.68 Å) Cite: Allosteric Site at the Biotin Carboxylase Dimer Interface Mediates Activation and Inhibition in Staphylococcus aureus Pyruvate Carboxylase. Biochemistry, 62, 2023
7AM5	Crystal structure of Peptiligase mutant - L217H/M222P/A225N Descriptor: SODIUM ION, Subtilisin BPN' Authors: Rozeboom, H.J, Janssen, D.J. Deposit date: 2020-10-08 Release date: 2021-02-17 Last modified: 2024-11-06 Method: X-RAY DIFFRACTION (2.3 Å) Cite: From thiol-subtilisin to omniligase: Design and structure of a broadly applicable peptide ligase. Comput Struct Biotechnol J, 19, 2021
4AI8	FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH DAMINOZIDE Descriptor: DAMINOZIDE, GLYCEROL, HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR, ... Authors: King, O.N.F, Chowdhury, R, Rose, N.R, McDonough, M.A, Clifton, I.J, Schofield, C.J, Kawamura, A. Deposit date: 2012-02-08 Release date: 2012-10-03 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Plant growth regulator daminozide is a selective inhibitor of human KDM2/7 histone demethylases. J. Med. Chem., 55, 2012
5GLN	Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome in complex with xylotriose, calcium-bound form Descriptor: ACETATE ION, CALCIUM ION, Glycoside hydrolase family 43, ... Authors: Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K. Deposit date: 2016-07-12 Release date: 2017-03-15 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium. J. Biochem., 162, 2017
5N8G	Serial Cu nitrite reductase structures at elevated cryogenic temperature, 240K. Dataset 2. Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, SULFATE ION Authors: Horrell, S, Kekilli, D, Hough, M, Strange, R. Deposit date: 2017-02-23 Release date: 2017-07-26 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.47 Å) Cite: Active-site protein dynamics and solvent accessibility in native Achromobacter cycloclastes copper nitrite reductase. IUCrJ, 4, 2017
3LII	Recombinant human acetylcholinesterase Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase, SULFATE ION Authors: Dvir, H, Rosenberry, T, Harel, M, Silman, I, Sussman, J. Deposit date: 2010-01-25 Release date: 2010-03-16 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Acetylcholinesterase: From 3D structure to function. Chem.Biol.Interact, 187, 2010
6SF5	Mn-containing form of the ribonucleotide reductase NrdB protein from Leeuwenhoekiella blandensis Descriptor: MANGANESE (II) ION, Ribonucleoside-diphosphate reductase, beta subunit 1 Authors: Hasan, M, Rozman Grinberg, I, Sjoberg, B.M, Logan, D.T. Deposit date: 2019-08-01 Release date: 2019-08-28 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Class Id ribonucleotide reductase utilizes a Mn2(IV,III) cofactor and undergoes large conformational changes on metal loading. J.Biol.Inorg.Chem., 24, 2019
8G8I	C3HR3_9r_shift4: Extendable repeat protein fiber Descriptor: C3HR3_9r_shift4 Authors: Bethel, N.P, Borst, A.J. Deposit date: 2023-02-17 Release date: 2023-08-30 Last modified: 2023-12-13 Method: ELECTRON MICROSCOPY (3.92 Å) Cite: Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023
8GAQ	C5HR2_4r: Extendable repeat protein pentamer Descriptor: C5HR2_4r Authors: Bethel, N.P, Borst, A.J. Deposit date: 2023-02-23 Release date: 2023-08-30 Last modified: 2023-12-20 Method: ELECTRON MICROSCOPY (3.73 Å) Cite: Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023
8E3U	Nickel-reconstituted nitrogenase MoFeP mutant S188A from Azotobacter vinelandii after IDS oxidation Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(7)-S(7) CLUSTER, ... Authors: Rutledge, H.L, Tezcan, F.A. Deposit date: 2022-08-17 Release date: 2022-12-14 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Role of Serine Coordination in the Structural and Functional Protection of the Nitrogenase P-Cluster. J.Am.Chem.Soc., 144, 2022
5K6D	Structure of FS50 an antagonist of NaV1.5 Descriptor: Putative secreted salivary protein Authors: Andersen, J.F, Xu, X. Deposit date: 2016-05-24 Release date: 2016-11-23 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (1.139 Å) Cite: Structure and Function of FS50, a salivary protein from the flea Xenopsylla cheopis that blocks the sodium channel NaV1.5. Sci Rep, 6, 2016
3LCG	The D-sialic acid aldolase mutant V251L Descriptor: N-acetylneuraminate lyase, SULFATE ION Authors: Chou, C.-Y, Wang, A.H.-J, Ko, T.-P. Deposit date: 2010-01-11 Release date: 2011-01-19 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Modulation of substrate specificities of D-sialic acid aldolase through single mutations of Val251 To be Published
5NAE	Pseudomonas fluorescens kynurenine 3-monooxygenase (KMO) in complex with 3-{5-chloro-2-oxo-6-[(1R)-1-(pyridin-2-yl)ethoxy]-2,3-dihydro-1,3-benzoxazol-3-yl}propanoic acid Descriptor: 3-[5-chloranyl-2-oxidanylidene-6-[(1~{R})-1-pyridin-2-ylethoxy]-1,3-benzoxazol-3-yl]propanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, Kynurenine 3-monooxygenase Authors: Rowland, P. Deposit date: 2017-02-27 Release date: 2017-06-21 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.76 Å) Cite: Structural and mechanistic basis of differentiated inhibitors of the acute pancreatitis target kynurenine-3-monooxygenase. Nat Commun, 8, 2017
5KG9	Crystal structure of the gp120 v2 antibody RE505-22 Fab from IGH- and IGK-humanized mouse Descriptor: Antibody RE505-22 Fab heavy chain, Antibody RE505-22 Fab light chain Authors: Nicely, N.I. Deposit date: 2016-06-13 Release date: 2017-01-25 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Immunodominance of Antibody Recognition of the HIV Envelope V2 Region in Ig-Humanized Mice. J. Immunol., 198, 2017
5KHK	HCN2 CNBD in complex with 2-aminopurine riboside-3', 5'-cyclic monophosphate (2-NH2-cPuMP) Descriptor: 2-Aminopurine riboside-3',5'-cyclic monophosphate, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 Authors: Ng, L.C.T, Putrenko, I, Baronas, V, Van Petegem, F, Accili, E.A. Deposit date: 2016-06-14 Release date: 2016-09-14 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.07 Å) Cite: Cyclic Purine and Pyrimidine Nucleotides Bind to the HCN2 Ion Channel and Variably Promote C-Terminal Domain Interactions and Opening. Structure, 24, 2016
6CG1	Crystal Structure of KDM4A with Compound 14 Descriptor: 3-{[(4-fluorophenyl)methyl]amino}pyridine-4-carboxylic acid, Lysine-specific demethylase 4A, NICKEL (II) ION, ... Authors: Hosfield, D.J, Nie, Z. Deposit date: 2018-02-19 Release date: 2018-04-18 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.16 Å) Cite: Structure-based design and discovery of potent and selective KDM5 inhibitors. Bioorg. Med. Chem. Lett., 28, 2018
5YB4	Crystal structure of HP23LN36KR Descriptor: HP23L, N36KR Authors: Zhang, X, Wang, X, He, Y. Deposit date: 2017-09-03 Release date: 2018-02-28 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural Insights into the Mechanisms of Action of Short-Peptide HIV-1 Fusion Inhibitors Targeting the Gp41 Pocket Front Cell Infect Microbiol, 8, 2018
4ZN8	Using molecular dynamics simulations to predict domain swapping of computationally designed protein variants Descriptor: POTASSIUM ION, computationally modified engrailed homeodomain Authors: Huang, P.-S, Thomas, L.M, Mayo, S.L. Deposit date: 2015-05-04 Release date: 2015-05-27 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (3 Å) Cite: Using Molecular Dynamics Simulations as an Aid in the Prediction of Domain Swapping of Computationally Designed Protein Variants. J.Mol.Biol., 427, 2015
5NB3	High resolution C-phycoerythrin from marine cyanobacterium Phormidium sp. A09DM at pH 7.5 Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, ... Authors: Sonani, R.R, Roszak, A.W, Ortmann de Percin Northumberland, C, Madamwar, D, Cogdell, R.J. Deposit date: 2017-03-01 Release date: 2017-09-27 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.38 Å) Cite: An improved crystal structure of C-phycoerythrin from the marine cyanobacterium Phormidium sp. A09DM. Photosyn. Res., 135, 2018
5GQI	Crystal structure of Cypovirus Polyhedra mutant with deletion of Ala194 Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ... Authors: Abe, S, Tabe, H, Ijiri, H, Yamashita, K, Hirata, K, Mori, H, Ueno, T. Deposit date: 2016-08-07 Release date: 2017-02-15 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Crystal Engineering of Self-Assembled Porous Protein Materials in Living Cells ACS Nano, 11, 2017
6SSY	Taurine ABC transporter substrate binding protein TauA from E. coli in complex with 2-Aminoethylphosphonic acid Descriptor: (2-aminoethyl)phosphonic acid, GLYCEROL, IODIDE ION, ... Authors: Beis, K, Qu, F. Deposit date: 2019-09-09 Release date: 2019-12-18 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.62 Å) Cite: Desolvation of the substrate-binding protein TauA dictates ligand specificity for the alkanesulfonate ABC importer TauABC. Biochem.J., 476, 2019
4A5N	Redoxregulator HypR in its reduced form Descriptor: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, UNCHARACTERIZED HTH-TYPE TRANSCRIPTIONAL REGULATOR YYBR Authors: Palm, G.J, Waack, P, Read, R.J, Hinrichs, W. Deposit date: 2011-10-26 Release date: 2012-01-11 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.81 Å) Cite: Structural Insights Into the Redox-Switch Mechanism of the Marr/Duf24-Type Regulator Hypr Nucleic Acids Res., 40, 2012
5GQL	Crystal structure of Wild Type Cypovirus Polyhedra Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ... Authors: Abe, S, Tabe, H, Ijiri, H, Yamashita, K, Hirata, K, Mori, H, Ueno, T. Deposit date: 2016-08-07 Release date: 2017-02-15 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Crystal Engineering of Self-Assembled Porous Protein Materials in Living Cells ACS Nano, 11, 2017

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