PDB: 30476 resultsInfo pagesStatus searchChemie searchBIRD

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6XEC	STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH KETONE INHIBITOR (COMPOUND O) Descriptor: (1S)-N-{(1S)-1-[5-cyano-2-(4-fluorophenyl)-1H-imidazol-4-yl]-7,7-dihydroxynonyl}-6-methyl-6-azaspiro[2.5]octane-1-carboxamide, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... Authors: Klein, D.J, Clausen, D. Deposit date: 2020-06-12 Release date: 2020-08-12 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.701 Å) Cite: Development of a selective HDAC inhibitor aimed at reactivating the HIV latent reservoir. Bioorg.Med.Chem.Lett., 30, 2020
6L77	Crystal structure of MS5 from Brassica napus Descriptor: MS5a Authors: Wang, X, Guan, Z.Y, Yin, P. Deposit date: 2019-10-31 Release date: 2020-06-03 Last modified: 2020-12-09 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural analysis of the meiosis-related protein MS5 reveals non-canonical papain enhancement by cystatin-like folds. Febs Lett., 594, 2020
6L7W	Crystal structure of Cet1 from Trypanosoma cruzi in complex with manganese ion. Descriptor: MANGANESE (II) ION, mRNA_triPase domain-containing protein Authors: Kuwabara, N, Ho, K. Deposit date: 2019-11-03 Release date: 2020-06-03 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal structures of the RNA triphosphatase fromTrypanosoma cruziprovide insights into how it recognizes the 5'-end of the RNA substrate. J.Biol.Chem., 295, 2020
6XGP	YSD1_17 major capsid protein Descriptor: YSD1_17 major capsid protein Authors: Grinter, R, Hardy, J.M, Dunstan, R, Lithgow, T.J, Coulibaly, F.J. Deposit date: 2020-06-17 Release date: 2020-07-01 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.6 Å) Cite: The architecture and stabilisation of flagellotropic tailed bacteriophages. Nat Commun, 11, 2020
6LGZ	Crystal structure of a cysteine-pair mutant (P10C-S291C) of a bacterial bile acid transporter in an inward-facing state complexed with sulfate Descriptor: 2,3-dihydroxypropyl (9Z)-octadec-9-enoate, SULFATE ION, Transporter, ... Authors: Wang, X, Lyu, Y, Ji, Y, Sun, Z, Zhou, X. Deposit date: 2019-12-06 Release date: 2020-12-09 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.428 Å) Cite: Substrate binding in the bile acid transporter ASBT Yf from Yersinia frederiksenii. Acta Crystallogr D Struct Biol, 77, 2021
7DFS	Crystal structure of a novel 4-O-alpha-L-rhamnosyl-beta-D-glucuronidase from Fusarium oxysporum 12S - Rha-GlcA complex Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-O-alpha-L-rhamnosyl-beta-D-glucuronidase, alpha-D-mannopyranose, ... Authors: Kondo, T, Arakawa, T, Fushinobu, S, Sakamoto, T. Deposit date: 2020-11-09 Release date: 2021-03-17 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.49 Å) Cite: Biochemical and structural characterization of a novel 4-O-alpha-l-rhamnosyl-beta-d-glucuronidase from Fusarium oxysporum. Febs J., 288, 2021
6XH2	Co-crystal structure of HIV-1 TAR RNA in complex with lab-evolved RRM 6.6 Descriptor: TAR-BINDING PROTEIN 6.6, TRANS-ACTIVATION RESPONSE ELEMENT Authors: Chavali, S.S, Jenkins, J.L, Wedekind, J.E. Deposit date: 2020-06-18 Release date: 2020-10-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.71 Å) Cite: Co-crystal structures of HIV TAR RNA bound to lab-evolved proteins show key roles for arginine relevant to the design of cyclic peptide TAR inhibitors. J.Biol.Chem., 295, 2020
6XHU	Room temperature X-ray crystallography reveals oxidation and reactivity of cysteine residues in SARS-CoV-2 3CL Mpro: Insights for enzyme mechanism and drug design Descriptor: 3C-like proteinase Authors: Kneller, D.W, Coates, L, Kovalevsky, A. Deposit date: 2020-06-19 Release date: 2020-07-01 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Room-temperature X-ray crystallography reveals the oxidation and reactivity of cysteine residues in SARS-CoV-2 3CL M pro : insights into enzyme mechanism and drug design. Iucrj, 7, 2020
4ZW3	X-ray crystal structure of PfA-M1 in complex with hydroxamic acid-based inhibitor 9b Descriptor: GLYCEROL, M1 family aminopeptidase, MAGNESIUM ION, ... Authors: Drinkwater, N, McGowan, S. Deposit date: 2015-05-19 Release date: 2016-03-30 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Potent dual inhibitors of Plasmodium falciparum M1 and M17 aminopeptidases through optimization of S1 pocket interactions. Eur.J.Med.Chem., 110, 2016
6XTN	Crystal structure reveals non-coordinative binding of O2 to the copper center of the formylglycine-generating enzyme - FGE:Ag:S:NO complex Descriptor: 1,2-ETHANEDIOL, Abz-ALA-THR-THR-PRO-LEU-CYS-GLY-PRO-SER-ARG-ALA-SER-ILE-LEU-SER-GLY, CALCIUM ION, ... Authors: Leisinger, F, Seebeck, F.P. Deposit date: 2020-01-16 Release date: 2021-01-27 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Non-Coordinative Binding of O2 at the Active Center of a Copper-Dependent Enzyme Angew.Chem.Int.Ed.Engl., 2020
4ZSJ	MITOGEN ACTIVATED PROTEIN KINASE 7 IN COMPLEX WITH INHIBITOR Descriptor: 3-amino-5-[(4-chloro-3-methylphenyl)amino]-N-(propan-2-yl)-1H-1,2,4-triazole-1-carboxamide, GLYCEROL, Mitogen-activated protein kinase 7 Authors: Tucker, J, Ogg, D.J. Deposit date: 2015-05-13 Release date: 2016-05-04 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.48 Å) Cite: Discovery of a novel allosteric inhibitor-binding site in ERK5: comparison with the canonical kinase hinge ATP-binding site. Acta Crystallogr D Struct Biol, 72, 2016
6XWB	Crystal structure of an R-selective transaminase from Thermomyces stellatus. Descriptor: 1,2-ETHANEDIOL, PYRIDOXAL-5'-PHOSPHATE, R-selective transaminase, ... Authors: Gourlay, L.J. Deposit date: 2020-01-23 Release date: 2020-04-15 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.2 Å) Cite: An ( R )-Selective Transaminase From Thermomyces stellatus : Stabilizing the Tetrameric Form. Front Bioeng Biotechnol, 8, 2020
4ZX4	X-ray crystal structure of PfA-M1 in complex with hydroxamic acid-based inhibitor 10o Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, M1 family aminopeptidase, ... Authors: Drinkwater, N, McGowan, S. Deposit date: 2015-05-20 Release date: 2016-03-30 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Potent dual inhibitors of Plasmodium falciparum M1 and M17 aminopeptidases through optimization of S1 pocket interactions. Eur.J.Med.Chem., 110, 2016
6XWT	drosophila melanogaster CENP-A/H4 bound to N-terminal CAL1 fragment Descriptor: Chromosome alignment defect 1, Histone H3-like centromeric protein cid, Histone H4 Authors: Jeyaprakash, A.A, Medina-Pritchard, B, Lazou, V, Zou, J, Byron, O, Abad, M.A, Rappsilber, J, Heun, P. Deposit date: 2020-01-24 Release date: 2020-04-01 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (3.47 Å) Cite: Structural basis for centromere maintenance by Drosophila CENP-A chaperone CAL1. Embo J., 39, 2020
6XY1	Crystal structure of a de novo designed parallel four-helix coiled coil, 4-KE-4. Descriptor: 4-KE-4 Authors: Edgell, C.L, Savery, N.J, Woolfson, D.N. Deposit date: 2020-01-29 Release date: 2020-03-18 Last modified: 2023-03-08 Method: X-RAY DIFFRACTION (1.5 Å) Cite: RobustDe Novo-Designed Homotetrameric Coiled Coils. Biochemistry, 59, 2020
6XYA	Cap-binding domain of SFTSV L protein Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, RNA-dependent RNA polymerase, SODIUM ION Authors: Gogrefe, N, Guenther, S, Rosenthal, M. Deposit date: 2020-01-30 Release date: 2020-04-08 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.35 Å) Cite: Structural and functional characterization of the severe fever with thrombocytopenia syndrome virus L protein. Nucleic Acids Res., 48, 2020
7DFQ	Crystal Structure of a novel 4-O-alpha-L-rhamnosyl-beta-D-glucuronidase from Fusarium oxysporum 12S, ligand-free form Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-O-alpha-L-rhamnosyl-beta-D-glucuronidase Authors: Kondo, T, Arakawa, T, Fushinobu, S, Sakamoto, T. Deposit date: 2020-11-09 Release date: 2021-03-17 Last modified: 2021-08-25 Method: X-RAY DIFFRACTION (1.51 Å) Cite: Biochemical and structural characterization of a novel 4-O-alpha-l-rhamnosyl-beta-d-glucuronidase from Fusarium oxysporum. Febs J., 288, 2021
6LDT	K245A mutant of L-tyrosine decarboxylase from Methanocaldococcus jannaschii complexed with a post-decarboxylation quinonoid-like intermediate formed with L-tyrosine Descriptor: GLYCEROL, L-tyrosine/L-aspartate decarboxylase, SULFATE ION, ... Authors: Manoj, N, Chellam Gayathri, S. Deposit date: 2019-11-23 Release date: 2020-12-02 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.93 Å) Cite: Structural insights into the mechanism of internal aldimine formation and catalytic loop dynamics in an archaeal Group II decarboxylase. J.Struct.Biol., 208, 2019
4ZRQ	E88 deletion mutant of CD320 in complex with TC2 Descriptor: CALCIUM ION, CD320 antigen, CYANOCOBALAMIN, ... Authors: Alam, A, Locher, K.P. Deposit date: 2015-05-12 Release date: 2016-07-20 Last modified: 2021-08-25 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural basis of transcobalamin recognition by human CD320 receptor. Nat Commun, 7, 2016
6XZE	crystal structure of human carbonic anhydrase I in complex with 4-(3-(2-((2-fluorobenzyl)amino)ethyl)ureido) benzenesulfonamide Descriptor: 1-[2-[(2-fluorophenyl)methylamino]ethyl]-3-(4-sulfamoylphenyl)urea, Carbonic anhydrase 1, ZINC ION Authors: Zanotti, G, Majid, A, Bozdag, M, Angeli, A, Carta, F, Berto, P, Supuran, C. Deposit date: 2020-02-04 Release date: 2020-09-23 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.54 Å) Cite: Benzylaminoethyureido-Tailed Benzenesulfonamides: Design, Synthesis, Kinetic and X-ray Investigations on Human Carbonic Anhydrases. Int J Mol Sci, 21, 2020
6XLX	Crystal structure of cancer-associated G301D mutant of U2AF65 bound to AdML splice site Descriptor: DNA/RNA (5'-R(P*UP*UP*(UD)P*UP*U)-D(P*(BRU))-R(P*CP*C)-3'), Splicing factor U2AF 65 kDa subunit Authors: Maji, D, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2020-06-29 Release date: 2020-10-07 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Representative cancer-associated U2AF2 mutations alter RNA interactions and splicing. J.Biol.Chem., 295, 2020
6XSV	X-ray structure of a tetragonal crystal form of alpha amylase from Aspergillus oryzae (Tala-Amylase) at 1.65 A resolution Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-amylase, ... Authors: McPherson, A. Deposit date: 2020-07-16 Release date: 2020-10-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Structures of two novel crystal forms of Aspergillus oryzae alpha amylase (taka-amylase). J.Biosci.Bioeng., 131, 2021
4ZYK	Crystal Structure of Quaternary-Specific RSV-Neutralizing Human Antibody AM14 Descriptor: 1,2-ETHANEDIOL, ACETATE ION, AM14 Fab heavy chain, ... Authors: Gilman, M.S.A, McLellan, J.S. Deposit date: 2015-05-21 Release date: 2015-07-29 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2 Å) Cite: Characterization of a Prefusion-Specific Antibody That Recognizes a Quaternary, Cleavage-Dependent Epitope on the RSV Fusion Glycoprotein. Plos Pathog., 11, 2015
6LCC	Crystal structure of AaTPS apo Descriptor: AaTPS Authors: He, H, Mori, T, Abe, I. Deposit date: 2019-11-18 Release date: 2020-07-01 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal structure of AaTPS Nat Commun, 2020
4ZTF	Crystal Structure of the Prototype Foamy Virus Intasome with a 2-Pyridinone Aminal Inhibitor Descriptor: (1R,2R,5S)-8'-(3-chloro-4-fluorobenzyl)-6'-hydroxy-2'-[(2S)-2-hydroxypropyl]-9',10'-dihydro-2'H-spiro[bicyclo[3.1.0]hexane-2,3'-imidazo[5,1-a][2,6]naphthyridine]-1',5',7'(8'H)-trione, 17 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (TRANSFERRED STRAND), 19 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (NON-TRANSFERRED STRAND), ... Authors: Klein, D.J, Patel, S. Deposit date: 2015-05-14 Release date: 2015-10-07 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Discovery of 2-Pyridinone Aminals: A Prodrug Strategy to Advance a Second Generation of HIV-1 Integrase Strand Transfer Inhibitors. J.Med.Chem., 58, 2015

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