PDB: 224931 resultsInfo pagesStatus searchChemie searchBIRD

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8H3W	Crystal structure of chicken egg lysozyme at ambient temperature Descriptor: Lysozyme C Authors: DeMirci, H. Deposit date: 2022-10-09 Release date: 2023-03-22 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.39 Å) Cite: Rapid and efficient ambient temperature X-ray crystal structure determination at Turkish Light Source. Sci Rep, 13, 2023
6Q3U	Gly52Ala mutant of arginine-bound ArgBP from T. maritima Descriptor: ARGININE, Amino acid ABC transporter, periplasmic amino acid-binding protein, ... Authors: Balasco, N, Smaldone, G, Ruggiero, A, Vitagliano, L. Deposit date: 2018-12-04 Release date: 2019-05-08 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.64 Å) Cite: The characterization of Thermotoga maritima Arginine Binding Protein variants demonstrates that minimal local strains have an important impact on protein stability. Sci Rep, 9, 2019
7Z70	Crystal structure of Angiotensin-1 converting enzyme C-domain in complex with fosinoprilat Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ... Authors: Cozier, G.E, Acharya, K.R. Deposit date: 2022-03-14 Release date: 2022-06-22 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Structural basis for the inhibition of human angiotensin-1 converting enzyme by fosinoprilat. Febs J., 289, 2022
5A70	Structure of the LecB lectin from Pseudomonas aeruginosa strain PA14 in complex with lewis x tetrasaccharide Descriptor: CALCIUM ION, LECB, SULFATE ION, ... Authors: Sommer, R, Wagner, S, Varrot, A, Khaledi, A, Haussler, S, Imberty, A, Titz, A. Deposit date: 2015-07-02 Release date: 2016-07-27 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Induction of rare conformation of oligosaccharide by binding to calcium-dependent bacterial lectin: X-ray crystallography and modelling study. Eur.J.Med.Chem., 177, 2019
5Z0A	ST0452(Y97N)-GlcNAc binding form Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Dual sugar-1-phosphate nucleotidylyltransferase Authors: Honda, Y, Nakano, S, Ito, S, Dadashipour, M, Zhang, Z, Kawarabayasi, Y. Deposit date: 2017-12-19 Release date: 2018-10-31 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.09 Å) Cite: Improvement of ST0452N-Acetylglucosamine-1-Phosphate Uridyltransferase Activity by the Cooperative Effect of Two Single Mutations Identified through Structure-Based Protein Engineering Appl. Environ. Microbiol., 84, 2018
8DOR	Crystal structure of Dihydropteridine reductase/oxygen-insensitive NAD(P)H nitroreductase from Klebsiella pneumoniae Descriptor: Dihydropteridine reductase/oxygen-insensitive NAD(P)H nitroreductase, FLAVIN MONONUCLEOTIDE, GLYCEROL, ... Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2022-07-14 Release date: 2022-07-27 Last modified: 2024-08-21 Method: X-RAY DIFFRACTION (1.35 Å) Cite: Crystal structures of NAD(P)H nitroreductases from Klebsiella pneumoniae. Acta Crystallogr.,Sect.F, 80, 2024
5JPJ	Crystal structure of 6aJL2-R24G Descriptor: 6aJL2 protein Authors: Pelaez-Aguilar, A.E, Diaz-Vilchis, A, Amero, C, Becerril, B, Rudino-Pinera, E. Deposit date: 2016-05-03 Release date: 2017-06-28 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure of 6aJL2-R24G light chain variable domain: Does crystal packing explain amyloid fibril formation? Biochem Biophys Rep, 20, 2019
7AER	Rebuilt and re-refined PDB entry 5yep: tri-AMPylated Shewanella oneidensis HEPN toxin in complex with MNT antitoxin Descriptor: ADENOSINE MONOPHOSPHATE, Toxin-antitoxin system antidote Mnt family, Toxin-antitoxin system toxin HepN family Authors: Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V. Deposit date: 2020-09-18 Release date: 2020-12-30 Method: X-RAY DIFFRACTION (3 Å) Cite: HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation. Mol.Cell, 80, 2020
4OA5	X-ray crystal structure of an O-methyltransferase from Anaplasma phagocytophilum bound to SAH solved by iodide SAD phasing Descriptor: 1,2-ETHANEDIOL, GLYCEROL, IODIDE ION, ... Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2014-01-03 Release date: 2014-03-05 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.3 Å) Cite: An O-Methyltransferase Is Required for Infection of Tick Cells by Anaplasma phagocytophilum. Plos Pathog., 11, 2015
7BUP	Crystal structure of PCNA from pathogenic yeast Candida albicans Descriptor: Proliferating cell nuclear antigen Authors: sundaram, R, Vasudevan, D. Deposit date: 2020-04-07 Release date: 2021-02-17 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structural analyses of PCNA from the fungal pathogen Candida albicans identify three regions with species-specific conformations. Febs Lett., 595, 2021
1O7A	Human beta-Hexosaminidase B Descriptor: 1,2-ETHANEDIOL, 2-(acetylamido)-2-deoxy-D-glucono-1,5-lactone, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Maier, T, Strater, N, Schuette, C, Klingenstein, R, Sandhoff, K, Saenger, W. Deposit date: 2002-10-29 Release date: 2003-10-23 Last modified: 2020-11-18 Method: X-RAY DIFFRACTION (2.25 Å) Cite: The X-Ray Crystal Structure of Human Beta-Hexosaminidase B Provides New Insights Into Sandhoff Disease J.Mol.Biol., 328, 2003
4OA8	X-ray crystal structure of O-methyltransferase from Anaplasma phagocytophilum in apo form Descriptor: 1,2-ETHANEDIOL, O-methyltransferase family protein, SODIUM ION Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2014-01-03 Release date: 2014-01-15 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.15 Å) Cite: An O-Methyltransferase Is Required for Infection of Tick Cells by Anaplasma phagocytophilum. Plos Pathog., 11, 2015
6D4N	Crystal structure of a Fc fragment of Rhesus macaque (Macaca mulatta) IgG4 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Fc fragment of IgG4 Authors: Gohain, N, Tolbert, W.D, Pazgier, M. Deposit date: 2018-04-18 Release date: 2019-05-01 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.25 Å) Cite: From Rhesus macaque to human: structural evolutionary pathways for immunoglobulin G subclasses. Mabs, 11, 2019
6XPT	Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to UDP Descriptor: MAGNESIUM ION, Nucleoside diphosphate kinase, URIDINE-5'-DIPHOSPHATE Authors: Nguyen, S, Bruning, J.B. Deposit date: 2020-07-09 Release date: 2020-11-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Nucleoside selectivity of Aspergillus fumigatus nucleoside-diphosphate kinase. Febs J., 288, 2021
6XP4	Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 Descriptor: Nucleoside diphosphate kinase Authors: Nguyen, S, Bruning, J.B. Deposit date: 2020-07-07 Release date: 2020-11-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2 Å) Cite: Nucleoside selectivity of Aspergillus fumigatus nucleoside-diphosphate kinase. Febs J., 288, 2021
6XPS	Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to GDP Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase Authors: Nguyen, S, Bruning, J.B. Deposit date: 2020-07-08 Release date: 2020-11-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.644 Å) Cite: Nucleoside selectivity of Aspergillus fumigatus nucleoside-diphosphate kinase. Febs J., 288, 2021
6YD9	Ecoli GyrB24 with inhibitor 16a Descriptor: 1,2-ETHANEDIOL, DNA gyrase subunit B, N-[6-(3-azanylpropanoylamino)-1,3-benzothiazol-2-yl]-3,4-bis(chloranyl)-5-methyl-1H-pyrrole-2-carboxamide Authors: Barancokova, M, Skok, Z, Benek, O, Cruz, C.D, Tammela, P, Tomasic, T, Zidar, N, Masic, L.P, Zega, A, Stevenson, C.E.M, Mundy, J, Lawson, D.M, Maxwell, A.M, Kikelj, D, Ilas, J. Deposit date: 2020-03-20 Release date: 2020-12-30 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Exploring the Chemical Space of Benzothiazole-Based DNA Gyrase B Inhibitors. Acs Med.Chem.Lett., 11, 2020
6XPV	Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to dTDP Descriptor: Nucleoside diphosphate kinase, THYMIDINE-5'-DIPHOSPHATE Authors: Nguyen, S, Bruning, J.B. Deposit date: 2020-07-09 Release date: 2020-11-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Nucleoside selectivity of Aspergillus fumigatus nucleoside-diphosphate kinase. Febs J., 288, 2021
6XPW	Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to CDP Descriptor: CYTIDINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase, PHOSPHATE ION Authors: Nguyen, S, Bruning, J.B. Deposit date: 2020-07-09 Release date: 2020-11-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Nucleoside selectivity of Aspergillus fumigatus nucleoside-diphosphate kinase. Febs J., 288, 2021
5L9D	AFAMIN ANTIBODY FRAGMENT, N14 FAB, L1- GLYCOSYLATED, CRYSTAL FORM I, parsimonious model Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, DI(HYDROXYETHYL)ETHER, ... Authors: Rupp, B, Naschberger, A. Deposit date: 2016-06-10 Release date: 2016-08-03 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.88 Å) Cite: The N14 anti-afamin antibody Fab: a rare VL1 CDR glycosylation, crystallographic re-sequencing, molecular plasticity and conservative versus enthusiastic modelling. Acta Crystallogr D Struct Biol, 72, 2016
6XP7	Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to ADP Descriptor: ADENOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase Authors: Nguyen, S, Bruning, J.B. Deposit date: 2020-07-08 Release date: 2020-11-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Nucleoside selectivity of Aspergillus fumigatus nucleoside-diphosphate kinase. Febs J., 288, 2021
6XPU	Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to IDP Descriptor: INOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase Authors: Nguyen, S, Bruning, J.B. Deposit date: 2020-07-09 Release date: 2020-11-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Nucleoside selectivity of Aspergillus fumigatus nucleoside-diphosphate kinase. Febs J., 288, 2021
5JPM	Structure of the complex of human complement C4 with MASP-2 rebuilt using iMDFF Descriptor: Complement C4-A, Mannan-binding lectin serine protease 2, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose Authors: Croll, T.I, Andersen, G.R. Deposit date: 2016-05-03 Release date: 2016-08-10 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (3.75 Å) Cite: Re-evaluation of low-resolution crystal structures via interactive molecular-dynamics flexible fitting (iMDFF): a case study in complement C4. Acta Crystallogr D Struct Biol, 72, 2016
7M2T	Crystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic Virus Descriptor: Coat protein, MAGNESIUM ION, PHOSPHATE ION, ... Authors: McPherson, A. Deposit date: 2021-03-17 Release date: 2021-12-15 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.71 Å) Cite: Structures of additional crystal forms of Satellite tobacco mosaic virus grown from a variety of salts. Acta Crystallogr.,Sect.F, 77, 2021
5L7X	Afamin antibody fragment, N14 Fab, L1- glycosylated, crystal form II Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, Mouse Antibody Fab Fragment, ... Authors: Rupp, B, Naschberger, A. Deposit date: 2016-06-04 Release date: 2016-07-13 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.86 Å) Cite: The N14 anti-afamin antibody Fab: a rare VL1 CDR glycosylation, crystallographic re-sequencing, molecular plasticity and conservative versus enthusiastic modelling. Acta Crystallogr D Struct Biol, 72, 2016

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