Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3WLB
DownloadVisualize
BU of 3wlb by Molmil
HLA-A24 in complex with HIV-1 Nef126-10(8T10F)
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-24 alpha chain, ...
Authors:Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A, Han, C.
Deposit date:2013-11-08
Release date:2014-06-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Switching and emergence of CTL epitopes in HIV-1 infection
Retrovirology, 11, 2014
3WWX
DownloadVisualize
BU of 3wwx by Molmil
Crystal structure of D-stereospecific amidohydrolase from Streptomyces sp. 82F2
Descriptor: OCTANE 1,8-DIAMINE, S12 family peptidase
Authors:Arima, J, Nagano, S, Hino, T, Shimone, K, Isoda, Y, Mori, N.
Deposit date:2014-07-03
Release date:2015-07-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Crystal structure of D-stereospecific amidohydrolase from Streptomyces sp. 82F2 - insight into the structural factors for substrate specificity.
Febs J., 283, 2016
4NDS
DownloadVisualize
BU of 4nds by Molmil
Crystal structure of L. decastes alpha-galactosyl-binding lectin
Descriptor: Alpha-galactosyl-binding lectin, SODIUM ION
Authors:Van Eerde, A, Grahn, E, Krengel, U.
Deposit date:2013-10-27
Release date:2014-12-10
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (0.997 Å)
Cite:Atomic-resolution structure of the alpha-galactosyl binding Lyophyllum decastes lectin reveals a new protein family found in both fungi and plants.
Glycobiology, 25, 2015
3WQB
DownloadVisualize
BU of 3wqb by Molmil
Crystal structure of aeromonas sobria serine protease (ASP) and the chaperone (ORF2) complex
Descriptor: CALCIUM ION, Extracellular serine protease, Open reading frame 2
Authors:Kobayashi, H, Yoshida, T, Miyakawa, T, Kato, R, Tashiro, M, Yamanaka, H, Tanokura, M, Tsuge, H.
Deposit date:2014-01-24
Release date:2015-03-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structural Basis for Action of the External Chaperone for a Propeptide-deficient Serine Protease from Aeromonas sobria.
J.Biol.Chem., 290, 2015
3T2L
DownloadVisualize
BU of 3t2l by Molmil
Crystal structure of a Putative cell adhesion protein (BF1858) from Bacteroides fragilis NCTC 9343 at 2.33 A resolution
Descriptor: CHLORIDE ION, GLYCEROL, Putative cell adhesion protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2011-07-22
Release date:2011-08-10
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
3WSH
DownloadVisualize
BU of 3wsh by Molmil
EDTA-treated, oxidized HcgD from Methanocaldococcus jannaschii
Descriptor: FE (III) ION, Putative GTP cyclohydrolase 1 type 2, SULFATE ION
Authors:Fujishiro, T, Ermler, U, Shima, S.
Deposit date:2014-03-13
Release date:2014-08-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A possible iron delivery function of the dinuclear iron center of HcgD in [Fe]-hydrogenase cofactor biosynthesis
Febs Lett., 588, 2014
3WSI
DownloadVisualize
BU of 3wsi by Molmil
EDTA-treated, reduced HcgD from Methanocaldococcus jannaschii
Descriptor: FE (II) ION, PHOSPHATE ION, Putative GTP cyclohydrolase 1 type 2
Authors:Fujishiro, T, Ermler, U, Shima, S.
Deposit date:2014-03-13
Release date:2014-08-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A possible iron delivery function of the dinuclear iron center of HcgD in [Fe]-hydrogenase cofactor biosynthesis
Febs Lett., 588, 2014
4PPD
DownloadVisualize
BU of 4ppd by Molmil
PduA K26A, crystal form 2
Descriptor: GLYCEROL, Propanediol utilization protein PduA, SULFATE ION
Authors:McNamara, D.E, Sawaya, M.R, Bobik, T.A, Yeates, T.O.
Deposit date:2014-02-26
Release date:2014-05-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Alanine scanning mutagenesis identifies an asparagine-arginine-lysine triad essential to assembly of the shell of the pdu microcompartment.
J.Mol.Biol., 426, 2014
4MRT
DownloadVisualize
BU of 4mrt by Molmil
Structure of the Phosphopantetheine Transferase Sfp in Complex with Coenzyme A and a Peptidyl Carrier Protein
Descriptor: 4'-phosphopantetheinyl transferase sfp, COENZYME A, GLYCEROL, ...
Authors:Tufar, P, Rahighi, S, Kraas, F.I, Kirchner, D.K, Loehr, F, Henrich, E, Koepke, J, Dikic, I, Guentert, P, Marahiel, M.A, Doetsch, V.
Deposit date:2013-09-17
Release date:2014-04-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of a PCP/Sfp Complex Reveals the Structural Basis for Carrier Protein Posttranslational Modification.
Chem.Biol., 21, 2014
4MIY
DownloadVisualize
BU of 4miy by Molmil
Crystal Structure of myo-inositol dehydrogenase from Lactobacillus casei in complex with NAD and myo-inositol
Descriptor: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, GLYCEROL, Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase, ...
Authors:Bertwistle, D, Sanders, D.A.R, Palmer, D.R.J.
Deposit date:2013-09-02
Release date:2015-03-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Crystal Structure of myo-inositol dehydrogenase from Lactobacillus casei in complex with NAD and myo-inositol
To be Published
4N54
DownloadVisualize
BU of 4n54 by Molmil
Crystal structure of scyllo-inositol dehydrogenase from Lactobacillus casei with bound cofactor NAD(H) and scyllo-inositol
Descriptor: (1r,2r,3r,4r,5r,6r)-cyclohexane-1,2,3,4,5,6-hexol, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Inositol dehydrogenase
Authors:Bertwistle, D, Sanders, D.A.R, Palmer, D.R.J.
Deposit date:2013-10-09
Release date:2015-04-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of scyllo-inositol dehydrogenase from Lactobacillus casei with bound cofactor NAD(H) and scyllo-inositol
To be Published
4RTX
DownloadVisualize
BU of 4rtx by Molmil
Crystal structure of the Src tyrosine kinase SH3 domain T96G/Q128R mutant
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, NICKEL (II) ION, Proto-oncogene tyrosine-protein kinase Src, ...
Authors:Camara-Artigas, A.
Deposit date:2014-11-16
Release date:2015-10-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Crystal structure of the Src tyrosine kinase SH3 domain T96G/Q128R mutant
To be Published
4RZL
DownloadVisualize
BU of 4rzl by Molmil
DNA recognition domain of the cytosine modification-dependent restriction endonuclease LpnPI
Descriptor: PENTAETHYLENE GLYCOL, Restriction endonuclease LpnPI
Authors:Sasnauskas, G, Tamulaitiene, G, Siksnys, V.
Deposit date:2014-12-22
Release date:2015-06-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-guided sequence specificity engineering of the modification-dependent restriction endonuclease LpnPI.
Nucleic Acids Res., 43, 2015
4RNI
DownloadVisualize
BU of 4rni by Molmil
PaMorA dimeric phosphodiesterase. apo form
Descriptor: Motility regulator
Authors:Phippen, C.W, Tews, I.
Deposit date:2014-10-24
Release date:2014-11-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Formation and dimerization of the phosphodiesterase active site of the Pseudomonas aeruginosa MorA, a bi-functional c-di-GMP regulator.
Febs Lett., 588, 2014
4MYR
DownloadVisualize
BU of 4myr by Molmil
Crystal structure of a putative CpaE2 pilus assembly protein (CpaE2) from Sinorhizobium meliloti 1021 at 2.72 A resolution (PSI Community Target, Shapiro)
Descriptor: CpaE2 pilus assembly protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2013-09-27
Release date:2013-10-16
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Crystal structure of a putative CpaE2 pilus assembly protein (CpaE2) from Sinorhizobium meliloti 1021 at 2.72 A resolution (PSI Community Target, Shapiro)
To be published
4ROA
DownloadVisualize
BU of 4roa by Molmil
1.90A resolution structure of SRPN2 (S358W) from Anopheles gambiae
Descriptor: Serpin 2
Authors:Lovell, S, Battaile, K.P, Zhang, X, Meekins, D.A, An, C, Michel, K.
Deposit date:2014-10-28
Release date:2014-12-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Inhibitory Effects of Hinge Loop Mutagenesis in Serpin-2 from the Malaria Vector Anopheles gambiae.
J.Biol.Chem., 290, 2015
4MWD
DownloadVisualize
BU of 4mwd by Molmil
Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-{3-[(3,5-dichlorobenzyl)amino]propyl}-3-thiophen-3-ylurea (Chem 1433) and ATP analog AMPPCP
Descriptor: 1-{3-[(3,5-dichlorobenzyl)amino]propyl}-3-thiophen-3-ylurea, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Koh, C.Y, Kim, J.E, Wetzel, A.B, de van der Schueren, W.J, Shibata, S, Liu, J, Zhang, Z, Fan, E, Verlinde, C.L.M.J, Hol, W.G.J.
Deposit date:2013-09-24
Release date:2014-04-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.253 Å)
Cite:Structures of Trypanosoma brucei Methionyl-tRNA Synthetase with Urea-Based Inhibitors Provide Guidance for Drug Design against Sleeping Sickness.
Plos Negl Trop Dis, 8, 2014
4RTU
DownloadVisualize
BU of 4rtu by Molmil
Crystal structure of the intertwined form of the Src tyrosine kinase SH3 domain T96G/Q128R mutant
Descriptor: DI(HYDROXYETHYL)ETHER, Proto-oncogene tyrosine-protein kinase Src, SULFATE ION, ...
Authors:Camara-Artigas, A, Bacarizo, J.
Deposit date:2014-11-16
Release date:2015-10-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.453 Å)
Cite:Crystal structure of the intertwined form of the Src tyrosine kinase SH3 domain T96G/Q128R mutant
To be Published
4N4S
DownloadVisualize
BU of 4n4s by Molmil
A Double Mutant Rat Erk2 in Complex With a Pyrazolo[3,4-d]pyrimidine Inhibitor
Descriptor: 3-[2-(benzyloxy)-8-methylquinolin-6-yl]-1-(propan-2-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, Mitogen-activated protein kinase 1
Authors:Hari, S.B, Maly, D.J, Merritt, E.A.
Deposit date:2013-10-08
Release date:2014-04-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Conformation-Selective ATP-Competitive Inhibitors Control Regulatory Interactions and Noncatalytic Functions of Mitogen-Activated Protein Kinases.
Chem.Biol., 21, 2014
4S3R
DownloadVisualize
BU of 4s3r by Molmil
Amylomaltase MalQ from Escherichia coli in complex with the pseudo-heptasaccharide acarviosine-glucose-acarbose
Descriptor: 1,2-ETHANEDIOL, 4-alpha-glucanotransferase, ACARBOSE DERIVED HEPTASACCHARIDE
Authors:Weiss, S.C, Schiefner, A.
Deposit date:2015-03-26
Release date:2015-07-08
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for the Interconversion of Maltodextrins by MalQ, the Amylomaltase of Escherichia coli.
J.Biol.Chem., 290, 2015
3WYY
DownloadVisualize
BU of 3wyy by Molmil
CRYSTAL STRUCTURE OF HUMAN MPS1 CATALYTIC DOMAIN IN COMPLEX WITH (E)-3-(4-((6-(((3s,5s,7s)-adamantan-1-yl)amino)-4-amino-5-cyanopyridin-2-yl)amino)-2-(cyanomethoxy)phenyl)-N-(2-methoxyethyl)acrylamide
Descriptor: (2E)-3-[4-({4-amino-5-cyano-6-[(3s,5s,7s)-tricyclo[3.3.1.1~3,7~]dec-1-ylamino]pyridin-2-yl}amino)-2-(cyanomethoxy)phenyl]-N-(2-methoxyethyl)prop-2-enamide, Dual specificity protein kinase TTK
Authors:Kusakabe, K, Ide, N, Daigo, Y, Itoh, T, Yamamoto, T, Kojima, E, Mitsuoka, Y, Tadano, G, Tagashira, S, Higashino, K, Okano, Y, Sato, Y, Inoue, M, Iguchi, M, Kanazawa, T, Ishioka, Y, Dohi, K, Kido, Y, Sakamoto, S, Ando, S, Maeda, M, Higaki, M, Yoshizawa, H, Murai, H, Nakamura, Y.
Deposit date:2014-09-10
Release date:2015-04-08
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:A unique hinge binder of extremely selective aminopyridine-based Mps1 (TTK) kinase inhibitors with cellular activity.
Bioorg.Med.Chem., 23, 2015
4NO3
DownloadVisualize
BU of 4no3 by Molmil
Crystal structure of AMPD2 phosphopeptide bound to HLA-A2
Descriptor: 1,2-ETHANEDIOL, AMP deaminase 2, Beta-2-microglobulin, ...
Authors:Mohammed, F, Stones, D.H, Willcox, B.E.
Deposit date:2013-11-19
Release date:2014-12-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:The antigenic identity of human class I MHC phosphopeptides is critically dependent upon phosphorylation status.
Oncotarget, 8, 2017
3WZY
DownloadVisualize
BU of 3wzy by Molmil
S266A mutant 3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 580MPa - complex with IPM and Mg
Descriptor: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION
Authors:Nagae, T, Watanabe, N.
Deposit date:2014-10-08
Release date:2015-10-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution
To be Published
3WY6
DownloadVisualize
BU of 3wy6 by Molmil
Structure of hyperthermophilic family 12 endocellulase (E197A) from Pyrococcus furiosus in complex with laminaribiose
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CALCIUM ION, Endoglucanase A, ...
Authors:Kataoka, M, Ishikawa, K.
Deposit date:2014-08-20
Release date:2015-09-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of hyperthermophilic family 12 endocellulase (E197A) from Pyrococcus furiosus in complex with laminaribiose
To be Published
4PRV
DownloadVisualize
BU of 4prv by Molmil
E. coli GyrB 43-kDa N-terminal fragment in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GyrB, MAGNESIUM ION
Authors:Stanger, F.V, Schirmer, T.
Deposit date:2014-03-06
Release date:2014-09-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the N-Terminal Gyrase B Fragment in Complex with ADPPi Reveals Rigid-Body Motion Induced by ATP Hydrolysis
Plos One, 9, 2014

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon