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1B3I
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BU of 1b3i by Molmil
NMR SOLUTION STRUCTURE OF PLASTOCYANIN FROM THE PHOTOSYNTHETIC PROKARYOTE, PROCHLOROTHRIX HOLLANDICA (MINIMIZED AVERAGE STRUCTURE)
Descriptor: COPPER (I) ION, PROTEIN (PLASTOCYANIN)
Authors:Babu, C.R, Volkman, B.F, Bullerjahn, G.S.
Deposit date:1998-12-11
Release date:1999-04-27
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR solution structure of plastocyanin from the photosynthetic prokaryote, Prochlorothrix hollandica.
Biochemistry, 38, 1999
8YVB
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BU of 8yvb by Molmil
Crystal structure of Caenorhabditis elegans ZIM-1 ZF1-2-CTD domain in complex with Chromosome II/III pairing center
Descriptor: C2H2-type domain-containing protein, DNA (5'-D(*TP*TP*GP*GP*TP*CP*TP*GP*CP*TP*A)-3'), DNA (5'-D(P*AP*GP*CP*AP*GP*AP*CP*CP*AP*A)-3'), ...
Authors:Li, F.D, Li, M.L.
Deposit date:2024-03-28
Release date:2024-12-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for C. elegans pairing center DNA binding specificity by the ZIM/HIM-8 family proteins.
Nat Commun, 15, 2024
6JPR
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BU of 6jpr by Molmil
Crystal structure of Phycocyanin from Nostoc sp. R76DM
Descriptor: GLYCEROL, PHYCOCYANOBILIN, Phycocyanin, ...
Authors:Sonani, R.R, Gupta, G.D, Rastogi, R.P, Patel, S.N, Madamwar, D, Kumar, V.
Deposit date:2019-03-27
Release date:2019-06-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Phylogenetic and crystallographic analysis of Nostoc phycocyanin having blue-shifted spectral properties.
Sci Rep, 9, 2019
7QO4
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BU of 7qo4 by Molmil
26S proteasome WT-Ubp6-UbVS complex in the si state (ATPases, Rpn1, Ubp6, and UbVS)
Descriptor: 26S proteasome regulatory subunit RPN1, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Hung, K.Y.S, Klumpe, S, Eisele, M.R, Elsasser, S, Geng, T.T, Cheng, C, Joshi, T, Rudack, T, Sakata, E, Finley, D.
Deposit date:2021-12-23
Release date:2022-06-01
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Allosteric control of Ubp6 and the proteasome via a bidirectional switch.
Nat Commun, 13, 2022
1KN6
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BU of 1kn6 by Molmil
Solution Structure of the Mouse Prohormone Convertase 1 Pro-Domain
Descriptor: Prohormone Convertase 1
Authors:Tangrea, M.A, Bryan, P.N, Sari, N, Orban, J.
Deposit date:2001-12-18
Release date:2002-07-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the pro-hormone convertase 1 pro-domain from Mus musculus.
J.Mol.Biol., 320, 2002
3JC9
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BU of 3jc9 by Molmil
Architectural model of the type IVa pilus machine in a non-piliated state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PilA, ...
Authors:Chang, Y.-W, Rettberg, L.A, Jensen, G.J.
Deposit date:2015-11-24
Release date:2016-03-16
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY
Cite:Architecture of the type IVa pilus machine.
Science, 351, 2016
3JC8
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BU of 3jc8 by Molmil
Architectural model of the type IVa pilus machine in a piliated state
Descriptor: LysM domain protein, PilA, PilN, ...
Authors:Chang, Y.-W, Rettberg, L.A, Jensen, G.J.
Deposit date:2015-11-24
Release date:2016-03-16
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY
Cite:Architecture of the type IVa pilus machine.
Science, 351, 2016
6B4V
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BU of 6b4v by Molmil
Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosome
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Svidritskiy, E, Korostelev, A.A.
Deposit date:2017-09-27
Release date:2018-02-07
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Mechanism of Inhibition of Translation Termination by Blasticidin S.
J. Mol. Biol., 430, 2018
7D6W
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BU of 7d6w by Molmil
Crystal structure of Phycocyanin from Synechococcus sp. R42DM
Descriptor: PHYCOCYANOBILIN, Phycocyanin alpha subunit, Phycocyanin beta subunit
Authors:Patel, S.N, Sonani, R.R, Chaubey, M.G, Singh, N.K, Kumar, V, Madamwar, D.
Deposit date:2020-10-02
Release date:2021-10-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of Synechococcus phycocyanin: implications of light-harvesting and antioxidant properties.
3 Biotech, 13, 2023
6BOH
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BU of 6boh by Molmil
Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Svidritskiy, E, Korostelev, A.A.
Deposit date:2017-11-20
Release date:2018-05-23
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Conformational Control of Translation Termination on the 70S Ribosome.
Structure, 26, 2018
2B5K
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BU of 2b5k by Molmil
PV5 NMR solution structure in DPC micelles
Descriptor: Polyphemusin-1
Authors:Powers, J.P.S, Tan, A, Ramamoorthy, A, Hancock, R.E.W.
Deposit date:2005-09-28
Release date:2005-10-11
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Solution structure and interaction of the antimicrobial polyphemusins with lipid membranes
Biochemistry, 44, 2005
7F7F
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BU of 7f7f by Molmil
Cryo-EM structure of Dnf1 from Saccharomyces cerevisiae in yeast lipids with beryllium fluoride (resting state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alkylphosphocholine resistance protein LEM3, ...
Authors:Xu, J, He, Y, Wu, X, Li, L.
Deposit date:2021-06-29
Release date:2022-03-23
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.81 Å)
Cite:Conformational changes of a phosphatidylcholine flippase in lipid membranes.
Cell Rep, 38, 2022
6BOK
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BU of 6bok by Molmil
E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Svidritskiy, E, Korostelev, A.A.
Deposit date:2017-11-20
Release date:2018-05-23
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Conformational Control of Translation Termination on the 70S Ribosome.
Structure, 26, 2018
8SBK
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BU of 8sbk by Molmil
Structure of HLA-A*24:02 in complex with peptide, LYLPVRVLI (ATG2A).
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, LEU-TYR-LEU-PRO-VAL-ARG-VAL-LEU-ILE, ...
Authors:Mallik, L, Young, M.C, Sgourakis, N.G.
Deposit date:2023-04-03
Release date:2023-12-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural principles of peptide-centric chimeric antigen receptor recognition guide therapeutic expansion.
Sci Immunol, 8, 2023
8SBL
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BU of 8sbl by Molmil
Structure of HLA-A*24:02 in complex with peptide, LYLPVRVLI
Descriptor: Beta-2-microglobulin, LEU-TYR-LEU-PRO-VAL-ARG-VAL-LEU-ILE, MHC class I antigen
Authors:Mallik, L, Young, M.C, Sgourakis, N.G.
Deposit date:2023-04-03
Release date:2023-12-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural principles of peptide-centric chimeric antigen receptor recognition guide therapeutic expansion.
Sci Immunol, 8, 2023
5KS8
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BU of 5ks8 by Molmil
Crystal structure of two-subunit pyruvate carboxylase from Methylobacillus flagellatus
Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, MANGANESE (II) ION, PYRUVIC ACID, ...
Authors:Choi, P.H, Tong, L.
Deposit date:2016-07-07
Release date:2016-10-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:A distinct holoenzyme organization for two-subunit pyruvate carboxylase.
Nat Commun, 7, 2016
2LYA
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BU of 2lya by Molmil
Structure of HIV-1 myr(-) matrix protein in complex with 1,2-dioctanoyl-sn-phosphatidylcholine
Descriptor: 1,2-DIOCTANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Matrix protein p17
Authors:Vlach, J, Saad, J.
Deposit date:2012-09-14
Release date:2013-02-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Trio engagement via plasma membrane phospholipids and the myristoyl moiety governs HIV-1 matrix binding to bilayers.
Proc.Natl.Acad.Sci.USA, 110, 2013
2LYB
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BU of 2lyb by Molmil
Structure of HIV-1 myr(-) matrix protein in complex with 1,2-dioctanoyl-sn-phosphatidyl-L-serine
Descriptor: Matrix protein p17, O-[(R)-{[(2R)-2,3-bis(octanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine
Authors:Vlach, J, Saad, J.
Deposit date:2012-09-14
Release date:2013-02-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Trio engagement via plasma membrane phospholipids and the myristoyl moiety governs HIV-1 matrix binding to bilayers.
Proc.Natl.Acad.Sci.USA, 110, 2013
2L12
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BU of 2l12 by Molmil
Solution NMR structure of the chromobox protein 7 with H3K9me3
Descriptor: Chromobox homolog 7, Histone H3
Authors:Kaustov, L, Lemak, A, Gutmanas, A, Fares, C, Quang, H, Loppnau, P, Min, J, Edwards, A, Arrowsmith, C, Structural Genomics Consortium (SGC)
Deposit date:2010-07-22
Release date:2010-08-04
Last modified:2025-03-26
Method:SOLUTION NMR
Cite:Recognition and specificity determinants of the human cbx chromodomains.
J.Biol.Chem., 286, 2011
2L11
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BU of 2l11 by Molmil
Solution NMR structure of the Cbx3 in complex with H3K9me3 peptide
Descriptor: Chromobox protein homolog 3, Histone H3
Authors:Kaustov, L, Lemak, A, Fares, C, Gutmanas, A, Quang, H, Loppnau, P, Min, J, Edwards, A, Arrowsmith, C, Structural Genomics Consortium (SGC)
Deposit date:2010-07-22
Release date:2010-08-04
Last modified:2025-03-26
Method:SOLUTION NMR
Cite:Recognition and specificity determinants of the human cbx chromodomains.
J.Biol.Chem., 286, 2011
2L1B
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BU of 2l1b by Molmil
Solution NMR structure of the chromobox protein Cbx7 with H3K27me3
Descriptor: Chromobox protein homolog 7, Histone H3
Authors:Kaustov, L, Lemak, A, Fares, C, Gutmanas, A, Muhandiram, R, Quang, H, Loppnau, P, Min, J, Edwards, A, Arrowsmith, C, Structural Genomics Consortium (SGC)
Deposit date:2010-07-27
Release date:2010-08-25
Last modified:2025-03-26
Method:SOLUTION NMR
Cite:Recognition and specificity determinants of the human cbx chromodomains.
J.Biol.Chem., 286, 2011
5JJ3
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BU of 5jj3 by Molmil
Refined Structure of the Mature Virion Conformation of P22 Portal Protein
Descriptor: Portal protein
Authors:Lokareddy, R.K, Sankhala, R.S, Cingolani, G.
Deposit date:2016-04-22
Release date:2017-02-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (7 Å)
Cite:Portal protein functions akin to a DNA-sensor that couples genome-packaging to icosahedral capsid maturation.
Nat Commun, 8, 2017
1PLO
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BU of 1plo by Molmil
TRANSFORMING GROWTH FACTOR-BETA TYPE II RECEPTOR EXTRACELLULAR DOMAIN
Descriptor: TGF-beta receptor type II
Authors:Deep, S, Walker III, K.P, Shu, Z, Hinck, A.P.
Deposit date:2003-06-08
Release date:2003-09-23
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Solution structure and backbone dynamics of the TGF-beta type II receptor extracellular domain
Biochemistry, 42, 2003
1PCS
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BU of 1pcs by Molmil
THE 2.15 A CRYSTAL STRUCTURE OF A TRIPLE MUTANT PLASTOCYANIN FROM THE CYANOBACTERIUM SYNECHOCYSTIS SP. PCC 6803
Descriptor: COPPER (II) ION, PLASTOCYANIN
Authors:Romero, A, De La Cerda, B, Varela, P.F, Navarro, J.A, Hervas, M, De La Rosa, M.A.
Deposit date:1997-06-17
Release date:1997-12-17
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The 2.15 A crystal structure of a triple mutant plastocyanin from the cyanobacterium Synechocystis sp. PCC 6803.
J.Mol.Biol., 275, 1998
5M32
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BU of 5m32 by Molmil
Human 26S proteasome in complex with Oprozomib
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ...
Authors:Haselbach, D, Schrader, J, Lambrecht, F, Henneberg, F, Chari, A, Stark, H.
Deposit date:2016-10-14
Release date:2017-07-05
Last modified:2025-07-09
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Long-range allosteric regulation of the human 26S proteasome by 20S proteasome-targeting cancer drugs.
Nat Commun, 8, 2017

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