Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4KML
DownloadVisualize
BU of 4kml by Molmil
Probing the N-terminal beta-sheet conversion in the crystal structure of the full-length human prion protein bound to a Nanobody
Descriptor: Major prion protein, Nanobody
Authors:Abskharon, R.N.N, Giachin, G, Wohlkonig, A, Soror, S.H, Pardon, E, Legname, G, Steyaert, J.
Deposit date:2013-05-08
Release date:2014-02-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Probing the N-Terminal beta-Sheet Conversion in the Crystal Structure of the Human Prion Protein Bound to a Nanobody.
J.Am.Chem.Soc., 136, 2014
7JUO
DownloadVisualize
BU of 7juo by Molmil
CBP bromodomain complexed with YF2-23
Descriptor: CREB-binding protein, N-{1-[1,1-di(pyridin-2-yl)ethyl]-6-(1-methyl-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridin-3-yl)-1H-indol-4-yl}ethanesulfonamide
Authors:Ratia, K.M, Xiong, R, Principe, D, Li, Y, Huang, F, Rana, A, Thatcher, G.
Deposit date:2020-08-20
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:XP-524 is a dual-BET/EP300 inhibitor that represses oncogenic KRAS and potentiates immune checkpoint inhibition in pancreatic cancer.
Proc.Natl.Acad.Sci.USA, 119, 2022
8U3S
DownloadVisualize
BU of 8u3s by Molmil
Structure of human TIRR in complex with VHH4 nanobody
Descriptor: Nanobody, Tudor-interacting repair regulator protein
Authors:Botuyan, M.V, Mer, G.
Deposit date:2023-09-08
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of human TIRR in complex with VHH4 nanobody
To Be Published
7KD3
DownloadVisualize
BU of 7kd3 by Molmil
Structure of an HxlR/DUF24 family transcription regulator, CdTR_3200 from hypervirulent Clostridioides difficile R20291
Descriptor: Putative transcriptional regulator
Authors:Menon, S.K, Isom, C.E, Karr, E.A.
Deposit date:2020-10-07
Release date:2021-09-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of an HxlR/DUF24 family transcription regulator, CdTR_3200 from hypervirulent Clostridioides difficile R20291
To Be Published
6B2C
DownloadVisualize
BU of 6b2c by Molmil
Macrophage Migration Inhibitory Factor in Complex with a Naphthyridinone Inhibitor (4b)
Descriptor: Macrophage migration inhibitory factor, SULFATE ION, {2-[1-(3-fluoro-4-hydroxyphenyl)-1H-1,2,3-triazol-4-yl]-8-oxo-1,7-naphthyridin-7(8H)-yl}acetic acid
Authors:Krimmer, S.G, Robertson, M.J, Jorgensen, W.L.
Deposit date:2017-09-19
Release date:2018-01-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Adding a Hydrogen Bond May Not Help: Naphthyridinone vs Quinoline Inhibitors of Macrophage Migration Inhibitory Factor.
ACS Med Chem Lett, 8, 2017
1WRM
DownloadVisualize
BU of 1wrm by Molmil
Crystal structure of JSP-1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, dual specificity phosphatase 22
Authors:Yokota, T, Kashima, A, Kato, R, Sugio, S.
Deposit date:2004-10-22
Release date:2005-10-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of human dual specificity phosphatase, JNK stimulatory phosphatase-1, at 1.5 A resolution
Proteins, 66, 2006
1WZ2
DownloadVisualize
BU of 1wz2 by Molmil
The crystal structure of Leucyl-tRNA synthetase and tRNA(leucine) complex
Descriptor: Leucyl-tRNA synthetase, tRNA
Authors:Fukunaga, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-02-21
Release date:2005-09-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:The crystal structure of Leucyl-tRNA synthetase and tRNA(leucine) complex
to be published
2WBB
DownloadVisualize
BU of 2wbb by Molmil
FRUCTOSE-1,6-BISPHOSPHATASE(D-FRUCTOSE-1,6-BISPHOSPHATE-1- PHOSPHOHYDROLASE) (E.C.3.1.3.11) COMPLEXED WITH AN AMP SITE INHIBITOR
Descriptor: FRUCTOSE-1,6-BISPHOSPHATASE 1, N-{[(2Z)-5-BROMO-1,3-THIAZOL-2(3H)-YLIDENE]CARBAMOYL}-4-METHYLBENZENESULFONAMIDE
Authors:Ruf, A, Joseph, C, Benz, J, Fol, B, Tetaz, T, Kitas, E, Mohr, P, Kuhn, B, Wessel, H.P, Hebeisen, P, Haap, W, Huber, W, Alvarez Sanchez, R, Paehler, A, Bernadeau, A, Gubler, M, Schott, B, Tozzo, E.
Deposit date:2009-02-26
Release date:2009-12-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Sulfonylureido Thiazoles as Fructose-1,6-Bisphosphatase Inhibitors for the Treatment of Type-2 Diabetes.
Bioorg.Med.Chem.Lett., 20, 2010
1FG9
DownloadVisualize
BU of 1fg9 by Molmil
3:1 COMPLEX OF INTERFERON-GAMMA RECEPTOR WITH INTERFERON-GAMMA DIMER
Descriptor: INTERFERON GAMMA, INTERFERON-GAMMA RECEPTOR ALPHA CHAIN
Authors:Thiel, D.J, le Du, M.-H, Walter, R.L, D'Arcy, A, Chene, C, Fountoulakis, M, Garotta, G, Winkler, F.K, Ealick, S.E.
Deposit date:2000-07-28
Release date:2000-08-11
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Observation of an unexpected third receptor molecule in the crystal structure of human interferon-gamma receptor complex.
Structure Fold.Des., 8, 2000
7JR5
DownloadVisualize
BU of 7jr5 by Molmil
Real Time Reaction Intermediates in Stigmatella Bacteriophytochrome P2
Descriptor: 3-[2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-5-[[(3~{S})-4-ethyl-3-methyl-2-oxidanylidene-1,3-dihydropyrrol-5-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, BENZAMIDINE, Photoreceptor-histidine kinase BphP
Authors:Schmidt, M.
Deposit date:2020-08-11
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:High-resolution crystal structures of transient intermediates in the phytochrome photocycle.
Structure, 29, 2021
2WH0
DownloadVisualize
BU of 2wh0 by Molmil
Recognition of an intrachain tandem 14-3-3 binding site within protein kinase C epsilon
Descriptor: 14-3-3 PROTEIN ZETA/DELTA, CALCIUM ION, PROTEIN KINASE C EPSILON TYPE, ...
Authors:Kostelecky, B, Saurin, A.T, Purkiss, A, Parker, P.J, McDonald, N.Q.
Deposit date:2009-04-28
Release date:2009-08-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Recognition of an Intra-Chain Tandem 14-3-3 Binding Site within Pkc Epsilon.
Embo Rep., 10, 2009
4IQ6
DownloadVisualize
BU of 4iq6 by Molmil
Gsk-3beta with inhibitor 6-chloro-N-cyclohexyl-4-(1H-pyrrolo[2,3-b]pyridin-3-yl)pyridin-2-amine
Descriptor: 6-chloro-N-cyclohexyl-4-(1H-pyrrolo[2,3-b]pyridin-3-yl)pyridin-2-amine, Glycogen synthase kinase-3 beta
Authors:Tong, Y, Stewart, K.D, Florjancic, A.S, Harlan, J.E, Merta, P.J, Przytulinska, M, Soni, N, Swinger, K.S, Zhu, H, Johnson, E.F, Shoemaker, A.R, Penning, T.D.
Deposit date:2013-01-10
Release date:2013-04-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:Azaindole-Based Inhibitors of Cdc7 Kinase: Impact of the Pre-DFG Residue, Val 195.
ACS Med Chem Lett, 4, 2013
2X0B
DownloadVisualize
BU of 2x0b by Molmil
Crystal structure of human angiotensinogen complexed with renin
Descriptor: ANGIOTENSINOGEN, RENIN
Authors:Zhou, A, Wei, Z, Yan, Y, Carrell, R.W, Read, R.J.
Deposit date:2009-12-08
Release date:2010-10-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (4.33 Å)
Cite:A Redox Switch in Angiotensinogen Modulates Angiotensin Release.
Nature, 468, 2010
4AG5
DownloadVisualize
BU of 4ag5 by Molmil
Structure of VirB4 of Thermoanaerobacter pseudethanolicus
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Wallden, K, Williams, R, Yan, J, Lian, P.W, Wang, L, Thalassinos, K, Orlova, E.V, Waksman, G.
Deposit date:2012-01-24
Release date:2012-07-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of the Virb4 ATPase, Alone and Bound to the Core Complex of a Type Iv Secretion System.
Proc.Natl.Acad.Sci.USA, 109, 2012
1WVD
DownloadVisualize
BU of 1wvd by Molmil
HIV-1 Dis(Mal) Duplex CoCl2-Soaked
Descriptor: 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', COBALT (II) ION
Authors:Ennifar, E, Walter, P, Dumas, P.
Deposit date:2004-12-15
Release date:2004-12-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
6BG7
DownloadVisualize
BU of 6bg7 by Molmil
Crystal structure of G107A mutant of human macrophage migration inhibitory factor
Descriptor: GLYCEROL, ISOPROPYL ALCOHOL, Macrophage migration inhibitory factor, ...
Authors:Pantouris, G, Lolis, E.
Deposit date:2017-10-27
Release date:2018-06-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Nanosecond Dynamics Regulate the MIF-Induced Activity of CD74.
Angew. Chem. Int. Ed. Engl., 57, 2018
8V8B
DownloadVisualize
BU of 8v8b by Molmil
Structure of 80alpha portal protein expressed in E. coli
Descriptor: Portal protein
Authors:Kizziah, J.L, Mukherjee, A, Dokland, T.
Deposit date:2023-12-05
Release date:2024-01-10
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
1WBU
DownloadVisualize
BU of 1wbu by Molmil
Fragment based lead discovery using crystallography
Descriptor: 5-AMINO-1H-PYRIMIDINE-2,4-DIONE, RIBONUCLEASE
Authors:Cleasby, A, Hartshorn, M.J, Murray, C.W, Jhoti, H, Tickle, I.J.
Deposit date:2004-11-05
Release date:2005-01-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Fragment-Based Lead Discovery Using X-Ray Crystallography
J.Med.Chem., 48, 2005
1WBK
DownloadVisualize
BU of 1wbk by Molmil
HIV-1 protease in complex with asymmetric inhibitor, BEA568
Descriptor: N,N-[2,5-O-DIBENZYL-GLUCARYL]-DI-[1-AMINO-INDAN-2-OL], POL PROTEIN (FRAGMENT)
Authors:Lindberg, J, Unge, T.
Deposit date:2004-11-02
Release date:2004-11-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:HIV-1 Protease in Complex with Asymmetric Inhibitor, Bea568
To be Published
1J1B
DownloadVisualize
BU of 1j1b by Molmil
Binary complex structure of human tau protein kinase I with AMPPNP
Descriptor: Glycogen synthase kinase-3 beta, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Aoki, M, Yokota, T, Sugiura, I, Sasaki, C, Hasegawa, T, Okumura, C, Kohno, T, Sugio, S, Matsuzaki, T.
Deposit date:2002-12-03
Release date:2003-12-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insight into nucleotide recognition in tau-protein kinase I/glycogen synthase kinase 3 beta.
Acta Crystallogr.,Sect.D, 60, 2004
2WXZ
DownloadVisualize
BU of 2wxz by Molmil
Crystal structure of rat angiotensinogen in C2 space group
Descriptor: ANGIOTENSINOGEN
Authors:Zhou, A, Wei, Z, Carrell, R.W, Read, R.J.
Deposit date:2009-11-11
Release date:2010-10-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A Redox Switch in Angiotensinogen Modulates Angiotensin Release.
Nature, 468, 2010
1W8Y
DownloadVisualize
BU of 1w8y by Molmil
Crystal structure of the nitrocefin acyl-DD-peptidase from Actinomadura R39.
Descriptor: (2R)-2-{(1R)-2-OXO-1-[(2-THIENYLACETYL)AMINO]ETHYL}-5,6-DIHYDRO-2H-1,3-THIAZINE-4-CARBOXYLIC ACID, D-alanyl-D-alanine carboxypeptidase, MAGNESIUM ION, ...
Authors:Sauvage, E, Herman, R, Petrella, S, Duez, C, Frere, J.M, Charlier, P.
Deposit date:2004-10-01
Release date:2005-06-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of the Actinomadura R39 Dd- Peptidase Reveals New Domains in Penicillin- Binding Proteins.
J.Biol.Chem., 280, 2005
4DUM
DownloadVisualize
BU of 4dum by Molmil
Co-crystal structure of eIF4E with inhibitor
Descriptor: (4-{7-[2-(4-chlorophenoxy)ethyl]-2-(methylamino)-6-oxo-6,7-dihydro-1H-purin-8-yl}phenyl)phosphonic acid, 1,2-ETHANEDIOL, Eukaryotic translation initiation factor 4E
Authors:Min, X, Johnstone, S, Walker, N, Wang, Z.
Deposit date:2012-02-22
Release date:2012-04-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure-Guided Design, Synthesis, and Evaluation of Guanine-Derived Inhibitors of the eIF4E mRNA-Cap Interaction.
J.Med.Chem., 55, 2012
7FTG
DownloadVisualize
BU of 7ftg by Molmil
Crystal Structure of human cyclic GMP-AMP synthase in complex with cGAMP
Descriptor: Cyclic GMP-AMP synthase, ZINC ION, cGAMP
Authors:Leibrock, L, Benz, J, Groebke-Zbinden, K, Rudolph, M.G.
Deposit date:2023-02-08
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal Structure of a human cyclic GMP-AMP synthase complex
To be published
7FTF
DownloadVisualize
BU of 7ftf by Molmil
Crystal Structure of apo human cyclic GMP-AMP synthase
Descriptor: 1,2-ETHANEDIOL, Cyclic GMP-AMP synthase, ZINC ION
Authors:Leibrock, L, Benz, J, Groebke-Zbinden, K, Rudolph, M.G.
Deposit date:2023-02-08
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.508 Å)
Cite:Crystal Structure of a human cyclic GMP-AMP synthase complex
To be published

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon