PDB: 35127 resultsInfo pagesStatus searchChemie searchBIRD

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5S8N	XChem group deposition -- Crystal Structure of the second bromodomain of pleckstrin homology domain interacting protein (PHIP) in complex with E07179c (space group C2) Descriptor: 3-methyl-3,4-dihydroquinazolin-2(1H)-one, PH-interacting protein Authors: Krojer, T, Talon, R, Fairhead, M, Szykowska, A, Burgess-Brown, N.A, Brennan, P.E, Arrowsmith, C.H, Edwards, A.M, Bountra, C, von Delft, F. Deposit date: 2020-12-17 Release date: 2021-01-13 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.23 Å) Cite: XChem group deposition To Be Published
2D3G	Double sided ubiquitin binding of Hrs-UIM Descriptor: ubiquitin, ubiquitin interacting motif from hepatocyte growth factor-regulated tyrosine kinase substrate Authors: Hirano, S, Kawasaki, M, Kato, R, Wakatsuki, S. Deposit date: 2005-09-28 Release date: 2005-12-20 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Double-sided ubiquitin binding of Hrs-UIM in endosomal protein sorting Nat.Struct.Mol.Biol., 13, 2006
2B1V	Human estrogen receptor alpha ligand-binding domain in complex with OBCP-1M and a glucocorticoid receptor interacting protein 1 NR box II peptide Descriptor: 4-[(1S,2S,5S)-5-(HYDROXYMETHYL)-8-METHYL-3-OXABICYCLO[3.3.1]NON-7-EN-2-YL]PHENOL, Estrogen receptor, Nuclear receptor coactivator 2 Authors: Rajan, S.S, Hsieh, R.W, Sharma, S.K, Greene, G.L. Deposit date: 2005-09-16 Release date: 2006-05-09 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Identification of ligands with bicyclic scaffolds provides insights into mechanisms of estrogen receptor subtype selectivity. J.Biol.Chem., 281, 2006
2FAI	Human Estrogen Receptor Alpha Ligand-Binding Domain In Complex With OBCP-2M and A Glucocorticoid Receptor Interacting Protein 1 NR Box II Peptide Descriptor: 4-[(1S,2S,5S,9R)-5-(HYDROXYMETHYL)-8,9-DIMETHYL-3-OXABICYCLO[3.3.1]NON-7-EN-2-YL]PHENOL, Estrogen receptor, Nuclear receptor coactivator 2 Authors: Rajan, S.S, Hsieh, R.W, Sharma, S.K, Greene, G.L. Deposit date: 2005-12-07 Release date: 2006-05-09 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Identification of ligands with bicyclic scaffolds provides insights into mechanisms of estrogen receptor subtype selectivity. J.Biol.Chem., 281, 2006
8SO0	Cryo-EM structure of the PP2A:B55-FAM122A complex Descriptor: FE (III) ION, PPP2R1A-PPP2R2A-interacting phosphatase regulator 1, Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform, ... Authors: Fuller, J.R, Padi, S.K.R, Peti, W, Page, R. Deposit date: 2023-04-28 Release date: 2023-10-25 Last modified: 2024-01-17 Method: ELECTRON MICROSCOPY (2.79961 Å) Cite: Cryo-EM structures of PP2A:B55-FAM122A and PP2A:B55-ARPP19. Nature, 625, 2024
8TWI	Cryo-EM structure of the PP2A:B55-FAM122A complex, PP2Ac body Descriptor: FE (III) ION, PPP2R1A-PPP2R2A-interacting phosphatase regulator 1, Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform, ... Authors: Fuller, J.R, Padi, S.K.R, Peti, W, Page, R. Deposit date: 2023-08-21 Release date: 2023-11-01 Last modified: 2024-01-17 Method: ELECTRON MICROSCOPY (2.69 Å) Cite: Cryo-EM structures of PP2A:B55-FAM122A and PP2A:B55-ARPP19. Nature, 625, 2024
7QXN	Proteasome-ZFAND5 Complex Z+A state Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ... Authors: Zhu, Y, Lu, Y. Deposit date: 2022-01-26 Release date: 2023-02-08 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Mechanism of 26S proteasome activation by the 19S-interacting protein ZFAND5 To Be Published
7QXP	Proteasome-ZFAND5 Complex Z+B state Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ... Authors: Zhu, Y, Lu, Y. Deposit date: 2022-01-26 Release date: 2023-02-08 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Mechanism of 26S proteasome activation by the 19S-interacting protein ZFAND5 To Be Published
7QYB	Proteasome-ZFAND5 Complex Z-C state Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ... Authors: Zhu, Y, Lu, Y. Deposit date: 2022-01-27 Release date: 2023-02-08 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Mechanism of 26S proteasome activation by the 19S-interacting protein ZFAND5 To Be Published
7QXW	Proteasome-ZFAND5 Complex Z+D state Descriptor: 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, 26S protease regulatory subunit 7, ... Authors: Zhu, Y, Lu, Y. Deposit date: 2022-01-27 Release date: 2023-02-08 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Mechanism of 26S proteasome activation by the 19S-interacting protein ZFAND5 To Be Published
7QYA	Proteasome-ZFAND5 Complex Z-B state Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ... Authors: Zhu, Y, Lu, Y. Deposit date: 2022-01-27 Release date: 2023-02-08 Method: ELECTRON MICROSCOPY (4.8 Å) Cite: Mechanism of 26S proteasome activation by the 19S-interacting protein ZFAND5 To Be Published
8PC5	H3K36me3 nucleosome-LEDGF/p75 PWWP domain complex Descriptor: Histone H2A, Histone H2B 1.1, Histone H3, ... Authors: Koutna, E, Kouba, T, Veverka, V. Deposit date: 2023-06-09 Release date: 2023-08-16 Last modified: 2023-11-15 Method: ELECTRON MICROSCOPY (3.02 Å) Cite: Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
8PEO	H3K36me2 nucleosome-LEDGF/p75 PWWP domain complex Descriptor: (2R)-2-amino-3-(2-dimethylaminoethylsulfanyl)propanoic acid, Histone H2A, Histone H2B 1.1, ... Authors: Koutna, E, Kouba, T, Veverka, V. Deposit date: 2023-06-14 Release date: 2023-08-16 Last modified: 2023-11-15 Method: ELECTRON MICROSCOPY (2.69 Å) Cite: Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
8PC6	H3K36me3 nucleosome-LEDGF/p75 PWWP domain complex - pose 2 Descriptor: Histone H2A, Histone H2B 1.1, Histone H3, ... Authors: Koutna, E, Kouba, T, Veverka, V. Deposit date: 2023-06-09 Release date: 2023-08-16 Last modified: 2023-11-15 Method: ELECTRON MICROSCOPY (3.04 Å) Cite: Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
8PEP	H3K36me2 nucleosome-LEDGF/p75 PWWP domain complex - pose 2 Descriptor: Histone H2A, Histone H2B 1.1, Histone H3, ... Authors: Koutna, E, Kouba, T, Veverka, V. Deposit date: 2023-06-14 Release date: 2023-08-16 Last modified: 2023-11-15 Method: ELECTRON MICROSCOPY (3.33 Å) Cite: Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
2Z36	Crystal structure of cytochrome P450 MoxA from Nonomuraea recticatena (CYP105) Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cytochrome P450 type compactin 3'',4''-hydroxylase, FE (III) ION, ... Authors: Yasutake, Y, Fujii, Y, Fujii, T, Arisawa, A, Tamura, T. Deposit date: 2007-06-02 Release date: 2007-08-21 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Crystal structure of cytochrome P450 MoxA from Nonomuraea recticatena (CYP105) Biochem.Biophys.Res.Commun., 361, 2007
7QXX	Proteasome-ZFAND5 Complex Z+E state Descriptor: 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, 26S protease regulatory subunit 7, ... Authors: Zhu, Y, Lu, Y. Deposit date: 2022-01-27 Release date: 2023-02-08 Method: ELECTRON MICROSCOPY (4.4 Å) Cite: Mechanism of 26S proteasome activation by the 19S-interacting protein ZFAND5 To Be Published
7QY7	Proteasome-ZFAND5 Complex Z-A state Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ... Authors: Zhu, Y, Lu, Y. Deposit date: 2022-01-27 Release date: 2023-02-08 Method: ELECTRON MICROSCOPY (4.7 Å) Cite: Mechanism of 26S proteasome activation by the 19S-interacting protein ZFAND5 To Be Published
7QXU	Proteasome-ZFAND5 Complex Z+C state Descriptor: 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, 26S protease regulatory subunit 7, ... Authors: Zhu, Y, Lu, Y. Deposit date: 2022-01-27 Release date: 2023-02-08 Method: ELECTRON MICROSCOPY (4.3 Å) Cite: Mechanism of 26S proteasome activation by the 19S-interacting protein ZFAND5 To Be Published
5UR6	PYR1 bound to the rationally designed agonist cyanabactin Descriptor: Abscisic acid receptor PYR1, N-(4-cyano-3-cyclopropylphenyl)-1-(4-methylphenyl)methanesulfonamide, SULFATE ION Authors: Peterson, F.C, Vaidya, A, Jensen, D.R, Volkman, B.F, Cutler, S.R. Deposit date: 2017-02-09 Release date: 2017-11-22 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.631 Å) Cite: A Rationally Designed Agonist Defines Subfamily IIIA Abscisic Acid Receptors As Critical Targets for Manipulating Transpiration. ACS Chem. Biol., 12, 2017
6KP3	STRUCTURE OF SENDAI VIRUS Y3/ALIX-BRO1 DOMAIN COMPLEX Descriptor: C' protein, Programmed cell death 6-interacting protein Authors: Oda, K, Matoba, Y, Sakaguchi, T. Deposit date: 2019-08-14 Release date: 2020-08-19 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural Insight into the Interaction of Sendai Virus C Protein with Alix To Stimulate Viral Budding. J.Virol., 2021
5M9D	Solution structure of Rtt103 CTD-interacting domain bound to a Ser2Ser7 phosphorylated CTD peptide Descriptor: Regulator of Ty1 transposition protein 103, THR-SER-PRO-SEP-TYR-SEP-PRO-THR-SER-PRO-SEP-TYR-SEP-PRO-THR-SER Authors: Jasnovidova, O, Kubicek, K, Stefl, R. Deposit date: 2016-11-01 Release date: 2017-10-11 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Structure and dynamics of the RNAPII CTDsome with Rtt103. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7TAE	Crystal Structure of the NPR1-Interacting Domain of TGA3 Descriptor: GLYCEROL, PALMITIC ACID, Transcription factor TGA3 Authors: Cheng, J, Zhou, P. Deposit date: 2021-12-20 Release date: 2022-03-16 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Structural basis of NPR1 in activating plant immunity. Nature, 605, 2022
3T1D	The mutant structure of human Siderocalin W79A, R81A, Y106F bound to Enterobactin Descriptor: 2,3-DIHYDROXY-BENZOIC ACID, 2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID, CHLORIDE ION, ... Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2011-07-21 Release date: 2011-08-17 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Parsing the functional specificity of Siderocalin/Lipocalin 2/NGAL for siderophores and related small-molecule ligands. J Struct Biol X, 2, 2019
1QUZ	Solution structure of the potassium channel scorpion toxin HSTX1 Descriptor: HSTX1 TOXIN Authors: Savarin, P, Romi-Lebrun, R, Zinn-Justin, S, Lebrun, B, Nakajima, T, Gilquin, B, Menez, A. Deposit date: 1999-07-05 Release date: 2000-07-07 Last modified: 2022-03-02 Method: SOLUTION NMR Cite: Structural and functional consequences of the presence of a fourth disulfide bridge in the scorpion short toxins: solution structure of the potassium channel inhibitor HsTX1. Protein Sci., 8, 1999

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