PDB: 5653 resultsInfo pagesStatus searchChemie searchBIRD

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5OP3	Designed Ankyrin Repeat Protein (DARPin) NDNH-1 selected by directed evolution against Lysozyme Descriptor: ACETATE ION, CALCIUM ION, CHLORIDE ION, ... Authors: Fischer, G, Hogan, B.J, Houlihan, G, Edmond, S, Huovinen, T.T.K, Hollfelder, F, Hyvonen, M. Deposit date: 2017-08-09 Release date: 2018-08-29 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.359 Å) Cite: Designed Ankyrin Repeat Protein (DARPin) NDNH-1 selected by directed evolution against Lysozyme To be published
3KD7	Designed TPR module (CTPR390) in complex with its peptide-ligand (Hsp90 peptide) Descriptor: CTPR390, Hsp90 MEEVD peptide Authors: Cortajarena, A.L, Wang, J, Regan, L. Deposit date: 2009-10-22 Release date: 2010-02-02 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.85 Å) Cite: Crystal structure of a designed tetratricopeptide repeat module in complex with its peptide ligand. Febs J., 277, 2010
5OOU	Designed Ankyrin Repeat Protein (DARPin) YTRL-1 selected by directed evolution against Lysozyme Descriptor: DARPin YTRL-1 Authors: Fischer, G, Hogan, B.J, Houlihan, G, Edmond, S, Huovinen, T.T.K, Hollfelder, F, Hyvonen, M. Deposit date: 2017-08-08 Release date: 2018-08-29 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.104 Å) Cite: Designed Ankyrin Repeat Protein (DARPin) YTRL-1 selected by directed evolution against Lysozyme To be published
5OOS	Designed Ankyrin Repeat Protein (DARPin) YTRL-2 selected by directed evolution against Lysozyme Descriptor: CHLORIDE ION, DARPin YTRL-2, NONAETHYLENE GLYCOL Authors: Hogan, B.J, Fischer, G, Houlihan, G, Edmond, S, Huovinen, T.T.K, Hollfelder, F, Hyvonen, M. Deposit date: 2017-08-08 Release date: 2018-08-29 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.26 Å) Cite: Designed Ankyrin Repeat Protein (DARPin) YTRL-2 selected by directed evolution against Lysozyme To be published
4ZXZ	Crystal structure of a highly thermal stable but inactive levoglucosan kinase. Descriptor: Levoglucosan kinase Authors: Bacik, J.P, Klesmith, J.R, Whitehead, T.A. Deposit date: 2015-05-20 Release date: 2015-09-23 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Comprehensive Sequence-Flux Mapping of a Levoglucosan Utilization Pathway in E. coli. Acs Synth Biol, 4, 2015
6DYH	Vanadyl-bound structure of the engineered cyt cb562 variant, CH3Y Descriptor: HEME C, Soluble cytochrome b562, VANADIUM ION Authors: Tezcan, F.A, Rittle, J. Deposit date: 2018-07-01 Release date: 2019-04-24 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.83 Å) Cite: An efficient, step-economical strategy for the design of functional metalloproteins. Nat.Chem., 11, 2019
6DYF	Cu(II)-bound structure of the engineered cyt cb562 variant, CH3Y Descriptor: CHLORIDE ION, COPPER (II) ION, DI(HYDROXYETHYL)ETHER, ... Authors: Tezcan, F.A, Rittle, J. Deposit date: 2018-07-01 Release date: 2019-04-24 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.1 Å) Cite: An efficient, step-economical strategy for the design of functional metalloproteins. Nat.Chem., 11, 2019
6DYK	Iron- and Nitric Oxide-bound structure of the engineered cyt b562 variant, CH3Y* Descriptor: FE (III) ION, NITRIC OXIDE, Soluble cytochrome b562 Authors: Tezcan, F.A, Rittle, J. Deposit date: 2018-07-01 Release date: 2019-04-24 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.955 Å) Cite: An efficient, step-economical strategy for the design of functional metalloproteins. Nat.Chem., 11, 2019
6DY4	Fe(II)-bound structure of the engineered cyt cb562 variant, CH2E Descriptor: FE (III) ION, HEME C, Soluble cytochrome b562 Authors: Rittle, J, Tezcan, F.A. Deposit date: 2018-07-01 Release date: 2019-04-24 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.9 Å) Cite: An efficient, step-economical strategy for the design of functional metalloproteins. Nat.Chem., 11, 2019
6DY8	Mn(II)-bound structure of the engineered cyt cb562 variant, CH2EY Descriptor: HEME C, MANGANESE (II) ION, Soluble cytochrome b562 Authors: Tezcan, F.A, Rittle, J. Deposit date: 2018-07-01 Release date: 2019-04-24 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.9 Å) Cite: An efficient, step-economical strategy for the design of functional metalloproteins. Nat.Chem., 11, 2019
6DYI	Co(II)-bound structure of the engineered cyt cb562 variant, H3 Descriptor: CALCIUM ION, CHLORIDE ION, COBALT (II) ION, ... Authors: Tezcan, F.A, Rittle, J. Deposit date: 2018-07-01 Release date: 2019-04-24 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.964 Å) Cite: An efficient, step-economical strategy for the design of functional metalloproteins. Nat.Chem., 11, 2019
6DYB	Metal-free structure of the engineered cyt cb562 variant, CH3 Descriptor: CALCIUM ION, HEME C, Soluble cytochrome b562 Authors: Tezcan, F.A, Rittle, J. Deposit date: 2018-07-01 Release date: 2019-04-24 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.75 Å) Cite: An efficient, step-economical strategy for the design of functional metalloproteins. Nat.Chem., 11, 2019
6DYJ	Iron-bound structure of the engineered cyt b562 variant, CH3Y* Descriptor: FE (III) ION, MAGNESIUM ION, Soluble cytochrome b562 Authors: Tezcan, F.A, Rittle, J. Deposit date: 2018-07-01 Release date: 2019-04-24 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.96 Å) Cite: An efficient, step-economical strategy for the design of functional metalloproteins. Nat.Chem., 11, 2019
7SGM	Crystal structure of a Fab variant containing a fluorescent noncanonical amino acid with blocked excited state proton transfer and in complex with its antigen, CD40L Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 5c8* Fab heavy chain, ... Authors: Henderson, J.N, Mills, J.H, Simmons, C.R. Deposit date: 2021-10-06 Release date: 2022-02-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural Basis for Blocked Excited State Proton Transfer in a Fluorescent, Photoacidic Non-Canonical Amino Acid-Containing Antibody Fragment. J.Mol.Biol., 434, 2022
6DYD	Cu(II)-bound structure of the engineered cyt cb562 variant, CH3 Descriptor: CALCIUM ION, COPPER (II) ION, HEME C, ... Authors: Tezcan, F.A, Rittle, J. Deposit date: 2018-07-01 Release date: 2019-04-24 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.724 Å) Cite: An efficient, step-economical strategy for the design of functional metalloproteins. Nat.Chem., 11, 2019
6DYC	Co(II)-bound structure of the engineered cyt cb562 variant, CH3 Descriptor: CALCIUM ION, COBALT (II) ION, HEME C, ... Authors: Tezcan, F.A, Rittle, J. Deposit date: 2018-07-01 Release date: 2019-04-24 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.33 Å) Cite: An efficient, step-economical strategy for the design of functional metalloproteins. Nat.Chem., 11, 2019
6DY6	Mn(II)-bound structure of the engineered cyt cb562 variant, CH2E Descriptor: HEME C, MANGANESE (II) ION, PENTAETHYLENE GLYCOL, ... Authors: Tezcan, F.A, Rittle, J. Deposit date: 2018-07-01 Release date: 2019-04-24 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.8 Å) Cite: An efficient, step-economical strategy for the design of functional metalloproteins. Nat.Chem., 11, 2019
6DYE	Fe(II)-bound structure of the engineered cyt cb562 variant, CH3 Descriptor: CALCIUM ION, FE (III) ION, HEME C, ... Authors: Tezcan, F.A, Rittle, J. Deposit date: 2018-07-01 Release date: 2019-04-24 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.25 Å) Cite: An efficient, step-economical strategy for the design of functional metalloproteins. Nat.Chem., 11, 2019
6DYL	Vanadyl-bound structure of the engineered cyt b562 variant, CH3Y* Descriptor: Soluble cytochrome b562, VANADIUM ION Authors: Tezcan, F.A, Rittle, J. Deposit date: 2018-07-01 Release date: 2019-04-24 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.691 Å) Cite: An efficient, step-economical strategy for the design of functional metalloproteins. Nat.Chem., 11, 2019
6DYG	Fe(II)-bound structure of the engineered cyt cb562 variant, CH3Y Descriptor: FE (III) ION, HEME C, MAGNESIUM ION, ... Authors: Tezcan, F.A, Rittle, J. Deposit date: 2018-07-01 Release date: 2019-04-24 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.49 Å) Cite: An efficient, step-economical strategy for the design of functional metalloproteins. Nat.Chem., 11, 2019
7SEN	Crystal structure of Fab containing a fluorescent noncanonical amino acid with blocked excited state proton transfer Descriptor: 5c8* Fab heavy chain, 5c8* Fab light chain Authors: Henderson, J.N, Mills, J.H, Simmons, C.R. Deposit date: 2021-09-30 Release date: 2022-02-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.09 Å) Cite: Structural Basis for Blocked Excited State Proton Transfer in a Fluorescent, Photoacidic Non-Canonical Amino Acid-Containing Antibody Fragment. J.Mol.Biol., 434, 2022
6MCT	A designed pentameric membrane protein stabilized by van der Waals interaction Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, SULFATE ION, mini-eVgL membrane protein Authors: Mravic, M, Liu, L, Degrado, W.F. Deposit date: 2018-09-02 Release date: 2019-04-03 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Packing of apolar side chains enables accurate design of highly stable membrane proteins. Science, 363, 2019
1T8J	NMR Structure of BBA5, A Compact, Independently Folded BBA Motif Descriptor: BBA5 Authors: Struthers, M.D, Ottesen, J.J, Imperiali, B. Deposit date: 2004-05-13 Release date: 2004-05-25 Last modified: 2022-03-02 Method: SOLUTION NMR Cite: Design and NMR Analyses of Compact, Independently Folded BBA Motifs Fold.Des., 3, 1998
4GLV	OBody AM3L09 bound to hen egg-white lysozyme Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, Lysozyme C, ... Authors: Steemson, J.D. Deposit date: 2012-08-15 Release date: 2013-08-21 Last modified: 2014-02-12 Method: X-RAY DIFFRACTION (2.574 Å) Cite: Tracking Molecular Recognition at the Atomic Level with a New Protein Scaffold Based on the OB-Fold. Plos One, 9, 2014
4GLU	Crystal structure of the mirror image form of VEGF-A Descriptor: ACETATE ION, D- Vascular endothelial growth factor-A, GLYCEROL, ... Authors: Mandal, K, Uppalapati, M, Ault-Riche, D, Kenney, J, Lowitz, J, Sidhu, S, Kent, S.B.H. Deposit date: 2012-08-14 Release date: 2012-09-05 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Chemical synthesis and X-ray structure of a heterochiral {D-protein antagonist plus vascular endothelial growth factor} protein complex by racemic crystallography. Proc.Natl.Acad.Sci.USA, 109, 2012

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