PDB: 348 resultsInfo pagesStatus searchChemie searchBIRD

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6AKS	Cryo-EM structure of CVA10 mature virus Descriptor: SPHINGOSINE, VP1, VP2, ... Authors: Zhu, L, Sun, Y, Fan, J.Y, Zhu, B, Cao, L, Gao, Q, Zhang, Y.J, Liu, H.R, Rao, Z.H, Wang, X.X. Deposit date: 2018-09-03 Release date: 2019-01-16 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (3 Å) Cite: Structures of Coxsackievirus A10 unveil the molecular mechanisms of receptor binding and viral uncoating. Nat Commun, 9, 2018
7C4Z	Cryo-EM structure of empty Coxsackievirus A10 at pH 5.5 Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3 Authors: Cui, Y, Peng, R, Song, H, Tong, Z, Gao, G.F, Qi, J. Deposit date: 2020-05-18 Release date: 2020-07-22 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Molecular basis of Coxsackievirus A10 entry using the two-in-one attachment and uncoating receptor KRM1. Proc.Natl.Acad.Sci.USA, 117, 2020
7C4Y	Cryo-EM structure of empty Coxsackievirus A10 at pH 7.4 Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3 Authors: Cui, Y, Peng, R, Song, H, Tong, Z, Gao, G.F, Qi, J. Deposit date: 2020-05-18 Release date: 2020-07-22 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Molecular basis of Coxsackievirus A10 entry using the two-in-one attachment and uncoating receptor KRM1. Proc.Natl.Acad.Sci.USA, 117, 2020
7C4W	Cryo-EM structure of A particle Coxsackievirus A10 at pH 5.5 Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3 Authors: Cui, Y, Peng, R, Song, H, Tong, Z, Gao, G.F, Qi, J. Deposit date: 2020-05-18 Release date: 2020-07-22 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Molecular basis of Coxsackievirus A10 entry using the two-in-one attachment and uncoating receptor KRM1. Proc.Natl.Acad.Sci.USA, 117, 2020
7C4T	Cryo-EM structure of A particle Coxsackievirus A10 at pH 7.4 Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3 Authors: Cui, Y, Peng, R, Song, H, Tong, Z, Gao, G.F, Qi, J. Deposit date: 2020-05-18 Release date: 2020-07-22 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Molecular basis of Coxsackievirus A10 entry using the two-in-one attachment and uncoating receptor KRM1. Proc.Natl.Acad.Sci.USA, 117, 2020
7ECY	EV-D68 in complex with 2H12 Fab (State 3) Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ... Authors: Xu, C, Cong, Y. Deposit date: 2021-03-13 Release date: 2021-03-31 Last modified: 2021-06-02 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Functional and structural characterization of a two-MAb cocktail for delayed treatment of enterovirus D68 infections. Nat Commun, 12, 2021
7BNY	Structure of 2A protein from encephalomyocarditis virus (EMCV) Descriptor: Genome polyprotein, SULFATE ION Authors: Hill, C.H, Napthine, S, Pekarek, L, Kibe, A, Firth, A.E, Graham, S.C, Caliskan, N, Brierley, I. Deposit date: 2021-01-22 Release date: 2021-12-08 Last modified: 2022-02-02 Method: X-RAY DIFFRACTION (2.62 Å) Cite: Structural and molecular basis for Cardiovirus 2A protein as a viral gene expression switch. Nat Commun, 12, 2021
7EBZ	EV-D68 in complex with 2H12 Fab (state S1) Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ... Authors: Xu, C, Cong, Y. Deposit date: 2021-03-11 Release date: 2021-03-31 Last modified: 2021-06-02 Method: ELECTRON MICROSCOPY (3.09 Å) Cite: Functional and structural characterization of a two-MAb cocktail for delayed treatment of enterovirus D68 infections. Nat Commun, 12, 2021
7EC5	EV-D68 in complex with 8F12 Fab Descriptor: 8F12 Fab heavy chain, 8F12 Fab light chain, Capsid protein VP1, ... Authors: Xu, C, Cong, Y. Deposit date: 2021-03-11 Release date: 2021-03-31 Last modified: 2021-06-02 Method: ELECTRON MICROSCOPY (2.89 Å) Cite: Functional and structural characterization of a two-MAb cocktail for delayed treatment of enterovirus D68 infections. Nat Commun, 12, 2021
7EBR	EV-D68 in complex with 2H12 Fab (state S2) Descriptor: 2H12 Fab heavy chain, 2H12 Fab light chain, Capsid protein VP1, ... Authors: Xu, C, Cong, Y. Deposit date: 2021-03-10 Release date: 2021-03-31 Last modified: 2021-06-02 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Functional and structural characterization of a two-MAb cocktail for delayed treatment of enterovirus D68 infections. Nat Commun, 12, 2021
7F0S	A crystal structure of alphavirus nonstructural protein 4 (nsP4) reveals an intrinsically 1dynamic RNA-dependent RNA polymerase Descriptor: RNA-directed RNA polymerase nsP4 Authors: Tan, Y.B, Luo, D. Deposit date: 2021-06-06 Release date: 2022-02-16 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal structures of alphavirus nonstructural protein 4 (nsP4) reveal an intrinsically dynamic RNA-dependent RNA polymerase fold. Nucleic Acids Res., 50, 2022
2XBO	Equine Rhinitis A Virus in Complex with its Sialic Acid Receptor Descriptor: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose, P1 Authors: Fry, E.E, Tuthill, T.J, Harlos, K, Walter, T.S, Rowlands, D.J, Stuart, D.I. Deposit date: 2010-04-14 Release date: 2010-09-22 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (4 Å) Cite: The Crystal Structure of Equine Rhinitis a Virus in Complex with its Sialic Acid Receptor. J.Gen.Virol., 91, 2010
3BSN	Norwalk Virus polymerase bound to 5-nitrocytidine triphosphate and primer-template RNA Descriptor: 5-nitrocytidine 5'-(tetrahydrogen triphosphate), GLYCEROL, MANGANESE (II) ION, ... Authors: Zamyatkin, D.F, Ng, K.K.S. Deposit date: 2007-12-26 Release date: 2008-01-08 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural insights into mechanisms of catalysis and inhibition in norwalk virus polymerase. J.Biol.Chem., 283, 2008
3BSO	Norwalk Virus polymerase bound to cytidine 5'-triphosphate and primer-template RNA Descriptor: CYTIDINE-5'-TRIPHOSPHATE, GLYCEROL, MANGANESE (II) ION, ... Authors: Zamyatkin, D.F, Ng, K.K.S. Deposit date: 2007-12-26 Release date: 2008-01-08 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.74 Å) Cite: Structural insights into mechanisms of catalysis and inhibition in norwalk virus polymerase. J.Biol.Chem., 283, 2008
6HBJ	Echovirus 18 empty particle Descriptor: Viral protein 1, Viral protein 2, Viral protein 3 Authors: Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P. Deposit date: 2018-08-10 Release date: 2019-03-20 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (3.16 Å) Cite: Enterovirus particles expel capsid pentamers to enable genome release. Nat Commun, 10, 2019
4NLQ	Poliovirus Polymerase - C290F Loop Mutant Descriptor: ACETIC ACID, PENTAETHYLENE GLYCOL, RNA-directed RNA polymerase 3D-POL, ... Authors: Sholders, A.J, Peersen, O.B. Deposit date: 2013-11-14 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Distinct conformations of a putative translocation element in poliovirus polymerase. J.Mol.Biol., 426, 2014
6H09	HIV capsid hexamer with IP6 ligand Descriptor: Gag polyprotein, INOSITOL HEXAKISPHOSPHATE Authors: James, L.C. Deposit date: 2018-07-06 Release date: 2018-08-15 Last modified: 2020-10-07 Method: X-RAY DIFFRACTION (2 Å) Cite: IP6 is an HIV pocket factor that prevents capsid collapse and promotes DNA synthesis. Elife, 7, 2018
6HBG	Echovirus 18 native particle Descriptor: Echovirus 18 viral protein 1, Echovirus 18 viral protein 2, Echovirus 18 viral protein 3, ... Authors: Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P. Deposit date: 2018-08-10 Release date: 2019-03-20 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (3.16 Å) Cite: Enterovirus particles expel capsid pentamers to enable genome release. Nat Commun, 10, 2019
6HBL	Echovirus 18 Open particle without three pentamers Descriptor: Echovirus 18 capsid protein 1, Echovirus 18 capsid protein 2, Echovirus 18 capsid protein 3 Authors: Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P. Deposit date: 2018-08-10 Release date: 2019-03-20 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Enterovirus particles expel capsid pentamers to enable genome release. Nat Commun, 10, 2019
6HBK	Echovirus 18 Open particle without one pentamer Descriptor: Echovirus 18 capsid protein 1, Echovirus 18 capsid protein 2, Echovirus 18 capsid protein 3 Authors: Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P. Deposit date: 2018-08-10 Release date: 2019-03-20 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Enterovirus particles expel capsid pentamers to enable genome release. Nat Commun, 10, 2019
6HHT	Echovirus 18 Open particle without two pentamers Descriptor: Echovirus 18 capsid protein 1, Echovirus 18 capsid protein 2, Echovirus 18 capsid protein 3 Authors: Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P. Deposit date: 2018-08-29 Release date: 2019-03-20 Last modified: 2019-04-10 Method: ELECTRON MICROSCOPY (4.05 Å) Cite: Enterovirus particles expel capsid pentamers to enable genome release. Nat Commun, 10, 2019
4NLO	Poliovirus Polymerase - C290I Loop Mutant Descriptor: ACETIC ACID, PENTAETHYLENE GLYCOL, RNA-directed RNA polymerase 3D-POL, ... Authors: Sholders, A.J, Peersen, O.B. Deposit date: 2013-11-14 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Distinct conformations of a putative translocation element in poliovirus polymerase. J.Mol.Biol., 426, 2014
4NLT	Poliovirus Polymerase - S291P Loop Mutant Descriptor: ACETIC ACID, PENTAETHYLENE GLYCOL, RNA-directed RNA polymerase 3D-POL, ... Authors: Sholders, A.J, Peersen, O.B. Deposit date: 2013-11-14 Release date: 2014-01-22 Last modified: 2014-03-26 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Distinct conformations of a putative translocation element in poliovirus polymerase. J.Mol.Biol., 426, 2014
2WUX	the crystal structure of recombinant baculovirus polyhedra Descriptor: POLYHEDRIN Authors: Ji, X, Sutton, G, Evans, G, Axford, D, Owen, R, Stuart, D.I. Deposit date: 2009-10-10 Release date: 2009-12-15 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.838 Å) Cite: How Baculovirus Polyhedra Fit Square Pegs Into Round Holes to Robustly Package Viruses. Embo J., 29, 2010
6HBH	Echovirus 18 A-particle Descriptor: Echovirus 18 capsid protein 1, Echovirus 18 capsid protein 2, Echovirus 18 capsid protein 3 Authors: Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P. Deposit date: 2018-08-10 Release date: 2019-03-20 Last modified: 2019-12-11 Method: ELECTRON MICROSCOPY (3.36 Å) Cite: Enterovirus particles expel capsid pentamers to enable genome release. Nat Commun, 10, 2019

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