PDB: 217477 resultsInfo pagesStatus searchChemie searchBIRD

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7RK9	Cryo-EM Structure of Adeno-Associated Virus Serotype 1 with Engineered Peptide Domain PHP.B (AAV1-PHP.B) Descriptor: Capsid protein Authors: Fluck, E.C, Pumroy, R.A, Moiseenkova-Bell, V.Y. Deposit date: 2021-07-22 Release date: 2021-08-04 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (2.32 Å) Cite: Context-Specific Function of the Engineered Peptide Domain of PHP.B. J.Virol., 95, 2021
7N1U	Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Zhang, J, Cai, Y.F, Xiao, T.S, Rawson, S, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Chen, B. Deposit date: 2021-05-28 Release date: 2021-07-07 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (3.14 Å) Cite: Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants. Science, 373, 2021
7N1X	Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Zhang, J, Cai, Y.F, Xiao, T.S, Rawson, S, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Chen, B. Deposit date: 2021-05-28 Release date: 2021-07-07 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (4 Å) Cite: Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants. Science, 373, 2021
6XRJ	Crystal structure of the disulfide linked DH717.1 Fab dimer, derived from a macaque HIV-1 vaccine-induced Env glycan-reactive neutralizing antibody B cell lineage Descriptor: DH717.1 heavy chain Fab fragment, DH717.1 light chain Fab fragment Authors: Manne, K, Nicely, N.I, Acharya, P. Deposit date: 2020-07-13 Release date: 2020-12-30 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.15 Å) Cite: Fab-dimerized glycan-reactive antibodies are a structural category of natural antibodies. Cell, 184, 2021
6P62	HIV Env BG505 NFL TD+ in complex with antibody E70 fragment antigen binding Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HIV-1 Env BG505 NFL TD+, ... Authors: Ozorowski, G, Torres, J.L, Ward, A.B. Deposit date: 2019-05-31 Release date: 2019-11-20 Last modified: 2020-07-29 Method: ELECTRON MICROSCOPY (3.57 Å) Cite: Vaccination with Glycan-Modified HIV NFL Envelope Trimer-Liposomes Elicits Broadly Neutralizing Antibodies to Multiple Sites of Vulnerability. Immunity, 51, 2019
7N1W	Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Zhang, J, Cai, Y.F, Xiao, T.S, Rawson, S, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Chen, B. Deposit date: 2021-05-28 Release date: 2021-07-07 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (3.33 Å) Cite: Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants. Science, 373, 2021
8TQD	NF-Kappa-B1 Bound with a Covalent Inhibitor Descriptor: 1-(2-bromo-4-chlorophenyl)-N-{(3S)-1-[(E)-iminomethyl]pyrrolidin-3-yl}methanesulfonamide, Nuclear factor NF-kappa-B p105 subunit Authors: Hilbert, B.J. Deposit date: 2023-08-07 Release date: 2024-04-24 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.02 Å) Cite: DrugMap: A quantitative pan-cancer analysis of cysteine ligandability. Cell, 187, 2024
6XQ7	Receptor for Advanced Glycation End Products VC1 domain in complex with Fragment 5 Descriptor: 5-bromo-3-methyl-1H-indole-2-carboxylic acid, ACETATE ION, Advanced glycosylation end product-specific receptor, ... Authors: Salay, L.E, Kozlyuk, N, Gilston, B.A, Gogliotti, R.D, Christov, P.P, Kim, K, Ovee, M, Waterson, A.G, Chazin, W.J. Deposit date: 2020-07-09 Release date: 2021-07-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.8 Å) Cite: A fragment-based approach to discovery of Receptor for Advanced Glycation End products inhibitors. Proteins, 89, 2021
7QIQ	CRYSTAL STRUCTURE OF THE P1 aminobutanoic acid (ABU) BPTI MUTANT- BOVINE CHYMOTRYPSIN COMPLEX Descriptor: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ... Authors: Dimos, N, Leppkes, J, Koksch, B, Wahl, M.C, Loll, B. Deposit date: 2021-12-15 Release date: 2022-03-09 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Fluorine-induced polarity increases inhibitory activity of BPTI towards chymotrypsin. Rsc Chem Biol, 3, 2022
7QIR	CRYSTAL STRUCTURE OF THE P1 monofluorethylglycine(MfeGly) BPTI MUTANT- BOVINE CHYMOTRYPSIN COMPLEX Descriptor: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ... Authors: Dimos, N, Leppkes, J, Koksch, B, Wahl, M.C, Loll, B. Deposit date: 2021-12-15 Release date: 2022-03-09 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Fluorine-induced polarity increases inhibitory activity of BPTI towards chymotrypsin. Rsc Chem Biol, 3, 2022
7QIS	CRYSTAL STRUCTURE OF THE P1 difluoroethylglycine (DfeGly) BPTI MUTANT- BOVINE CHYMOTRYPSIN COMPLEX Descriptor: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ... Authors: Dimos, N, Leppkes, J, Koksch, B, Wahl, M.C, Loll, B. Deposit date: 2021-12-15 Release date: 2022-03-09 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.83 Å) Cite: Fluorine-induced polarity increases inhibitory activity of BPTI towards chymotrypsin. Rsc Chem Biol, 3, 2022
7QIT	CRYSTAL STRUCTURE OF THE P1 trifluoroethylglycine (TfeGly) BPTI MUTANT- BOVINE CHYMOTRYPSIN COMPLEX Descriptor: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ... Authors: Dimos, N, Leppkes, J, Koksch, B, Wahl, M.C, Loll, B. Deposit date: 2021-12-15 Release date: 2022-03-09 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Fluorine-induced polarity increases inhibitory activity of BPTI towards chymotrypsin. Rsc Chem Biol, 3, 2022
7NUI	Crystal structure of HLA-B*08:01 in complex with ELRSRYWAI viral peptide Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, ... Authors: Mavridis, G, Giastas, P, Mpakali, A. Deposit date: 2021-03-12 Release date: 2021-04-14 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure of HLA-B*08:01 in complex with ELRSRYWAI viral peptide To Be Published
6PTS	NMR data-driven model of KRas-GMPPNP:RBD-CRD complex tethered to a nanodisc (state A) Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, GTPase KRas, ... Authors: Fang, Z, Lee, K, Gasmi-Seabrook, G, Ikura, M, Marshall, C.B. Deposit date: 2019-07-16 Release date: 2020-05-13 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Multivalent assembly of KRAS with the RAS-binding and cysteine-rich domains of CRAF on the membrane. Proc.Natl.Acad.Sci.USA, 117, 2020
6PUA	The 2.0 A Crystal Structure of the Type B Chloramphenicol Acetyltransferase from Vibrio cholerae Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, CHLORIDE ION, ... Authors: Kim, Y, Maltseva, N, Stam, J, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2019-07-18 Release date: 2019-09-25 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural and functional characterization of three Type B and C chloramphenicol acetyltransferases from Vibrio species. Protein Sci., 29, 2020
7ONJ	Mechanosensitive channel MscS solubilized with LMNG in open conformation Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, DODECYL-BETA-D-MALTOSIDE, Lauryl Maltose Neopentyl Glycol, ... Authors: Rasmussen, T, Flegler, V.J, Boettcher, B. Deposit date: 2021-05-25 Release date: 2021-09-01 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (2.3 Å) Cite: Mechanosensitive channel gating by delipidation. Proc.Natl.Acad.Sci.USA, 118, 2021
7N1V	Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Zhang, J, Cai, Y.F, Xiao, T.S, Rawson, S, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Chen, B. Deposit date: 2021-05-28 Release date: 2021-07-07 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants. Science, 373, 2021
7N1T	Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Zhang, J, Cai, Y.F, Xiao, T.S, Rawson, S, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Chen, B. Deposit date: 2021-05-28 Release date: 2021-07-07 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (3.44 Å) Cite: Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants. Science, 373, 2021
7N1Q	Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Zhang, J, Cai, Y.F, Xiao, T.S, Rawson, S, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Chen, B. Deposit date: 2021-05-28 Release date: 2021-07-07 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (3.44 Å) Cite: Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants. Science, 373, 2021
7RSO	AMC016 SOSIP.v4.2 in complex with PGV04 Fab Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, AMC016 gp120, ... Authors: Bader, D.L.V, Cottrell, C.A, Ward, A.B. Deposit date: 2021-08-11 Release date: 2021-09-15 Last modified: 2022-01-26 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: The Glycan Hole Area of HIV-1 Envelope Trimers Contributes Prominently to the Induction of Autologous Neutralization. J.Virol., 96, 2022
7RSN	AMC018 SOSIP.v4.2 in complex with PGV04 Fab Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, AMC018 gp120, ... Authors: Cottrell, C.A, Ward, A.B. Deposit date: 2021-08-11 Release date: 2021-09-15 Last modified: 2022-01-26 Method: ELECTRON MICROSCOPY (3.49 Å) Cite: The Glycan Hole Area of HIV-1 Envelope Trimers Contributes Prominently to the Induction of Autologous Neutralization. J.Virol., 96, 2022
6SZS	Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Muller, C, Beckert, B, Wilson, D.N. Deposit date: 2019-10-02 Release date: 2019-12-04 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (3.06 Å) Cite: Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis. Nat Commun, 10, 2019
8ENU	Structure of the C3bB proconvertase in complex with lufaxin Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Complement C3 beta chain, Complement C3b alpha' chain, ... Authors: Andersen, J.F, Lei, H. Deposit date: 2022-09-30 Release date: 2023-08-09 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3.22 Å) Cite: A bispecific inhibitor of complement and coagulation blocks activation in complementopathy models via a novel mechanism. Blood, 141, 2023
6YT2	Crystal Structure of human monoamine oxidase B in complex with Diphenylene iodonium (DPI) Descriptor: Amine oxidase [flavin-containing] B, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ... Authors: Iacovino, L.G, Reis, J, Mai, A, Mattevi, A, Binda, C. Deposit date: 2020-04-23 Release date: 2020-06-10 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Diphenylene Iodonium Is a Noncovalent MAO Inhibitor: A Biochemical and Structural Analysis. Chemmedchem, 15, 2020
6QJO	DNA containing both right- and left-handed parallel-stranded G-quadruplexes Descriptor: DNA (28-MER), POTASSIUM ION Authors: Winnerdy, F.R, Bakalar, B, Maity, A, Vandana, J.J, Schmitt, E, Mechulam, Y, Phan, A.T. Deposit date: 2019-01-24 Release date: 2019-07-03 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.8 Å) Cite: NMR solution and X-ray crystal structures of a DNA molecule containing both right- and left-handed parallel-stranded G-quadruplexes. Nucleic Acids Res., 47, 2019

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