Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 249 results

2E9Z
DownloadVisualize
BU of 2e9z by Molmil
Foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA, ATP and UTP
Descriptor: 5'-R(*CP*AP*UP*GP*GP*GP*CP*CP*C)-3', 5'-R(*GP*GP*GP*CP*CP*CP*A)-3', MAGNESIUM ION, ...
Authors:Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N.
Deposit date:2007-01-29
Release date:2007-06-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Sequential structures provide insights into the fidelity of RNA replication
Proc.Natl.Acad.Sci.Usa, 104, 2007
2CKW
DownloadVisualize
BU of 2ckw by Molmil
The 2.3 A resolution structure of the Sapporo virus RNA dependant RNA polymerase.
Descriptor: RNA-DIRECTED RNA POLYMERASE
Authors:Fullerton, S.W.B, Tucker, P.A, Rohayem, J, Coutard, B, Gebhardt, J, Gorbalenya, A, Canard, B.
Deposit date:2006-04-24
Release date:2006-11-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Functional Characterization of Sapovirus RNA-Dependent RNA Polymerase.
J.Virol., 81, 2007
2F8E
DownloadVisualize
BU of 2f8e by Molmil
Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with uridylylated VPg protein
Descriptor: MAGNESIUM ION, MANGANESE (II) ION, RNA-dependent RNA polymerase, ...
Authors:Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N.
Deposit date:2005-12-02
Release date:2006-03-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The structure of a protein primer-polymerase complex in the initiation of genome replication
Embo J., 25, 2006
5FJ6
DownloadVisualize
BU of 5fj6 by Molmil
Structure of the P2 polymerase inside in vitro assembled bacteriophage phi6 polymerase complex
Descriptor: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
Authors:Ilca, S, Kotecha, A, Sun, X, Poranen, M.P, Stuart, D.I, Huiskonen, J.T.
Deposit date:2015-10-06
Release date:2015-11-04
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.9 Å)
Cite:Localized Reconstruction of Subunits from Electron Cryomicroscopy Images of Macromolecular Complexes.
Nat.Commun., 6, 2015
5F8L
DownloadVisualize
BU of 5f8l by Molmil
Enterovirus 71 Polymerase Elongation Complex (C3S1 Form)
Descriptor: Genome polyprotein, RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*C)-3'), ...
Authors:Shu, B, Gong, P.
Deposit date:2015-12-09
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.812 Å)
Cite:Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
5F8H
DownloadVisualize
BU of 5f8h by Molmil
Enterovirus 71 Polymerase Elongation Complex (C1S1/2 Form)
Descriptor: Genome polyprotein, MAGNESIUM ION, RNA (35-MER), ...
Authors:Shu, B, Gong, P.
Deposit date:2015-12-09
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
5F8M
DownloadVisualize
BU of 5f8m by Molmil
Enterovirus 71 Polymerase Elongation Complex (C3S4/5 Form)
Descriptor: GLYCEROL, Genome polyprotein, MAGNESIUM ION, ...
Authors:Shu, B, Gong, P.
Deposit date:2015-12-09
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
5F8N
DownloadVisualize
BU of 5f8n by Molmil
Enterovirus 71 Polymerase Elongation Complex (C3S6 Form)
Descriptor: GLYCEROL, Genome polyprotein, PYROPHOSPHATE 2-, ...
Authors:Shu, B, Gong, P.
Deposit date:2015-12-09
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.484 Å)
Cite:Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
5F8I
DownloadVisualize
BU of 5f8i by Molmil
Enterovirus 71 Polymerase Elongation Complex (C1S2/3 Form)
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, GLYCEROL, Genome polyprotein, ...
Authors:Shu, B, Gong, P.
Deposit date:2015-12-09
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
5F8J
DownloadVisualize
BU of 5f8j by Molmil
Enterovirus 71 Polymerase Elongation Complex (C1S4 Form)
Descriptor: GLYCEROL, Genome polyprotein, MAGNESIUM ION, ...
Authors:Shu, B, Gong, P.
Deposit date:2015-12-09
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.675 Å)
Cite:Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
5F8G
DownloadVisualize
BU of 5f8g by Molmil
Enterovirus 71 Polymerase Elongation Complex (C1S1 Form)
Descriptor: Genome polyprotein, RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*A)-3'), ...
Authors:Shu, B, Gong, P.
Deposit date:2015-12-09
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
6KWR
DownloadVisualize
BU of 6kwr by Molmil
Crystal structure of enterovirus 71 polymerase elongation complex (ddCTP form)
Descriptor: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (31-MER), ...
Authors:Shi, W, Gong, P.
Deposit date:2019-09-08
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A nucleobase-binding pocket in a viral RNA-dependent RNA polymerase contributes to elongation complex stability.
Nucleic Acids Res., 48, 2020
6KWQ
DownloadVisualize
BU of 6kwq by Molmil
Crystal structure of enterovirus 71 polymerase elongation complex (native form)
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, MAGNESIUM ION, ...
Authors:Shi, W, Gong, P.
Deposit date:2019-09-08
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:A nucleobase-binding pocket in a viral RNA-dependent RNA polymerase contributes to elongation complex stability.
Nucleic Acids Res., 48, 2020
6L4R
DownloadVisualize
BU of 6l4r by Molmil
Crystal structure of Enterovirus D68 RdRp
Descriptor: RdRp
Authors:Wang, M.L, Li, L, Zhang, Y, Chen, Y.P, Su, D.
Deposit date:2019-10-21
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.147 Å)
Cite:Structure of the enterovirus D68 RNA-dependent RNA polymerase in complex with NADPH implicates an inhibitor binding site in the RNA template tunnel.
J.Struct.Biol., 211, 2020
6LSG
DownloadVisualize
BU of 6lsg by Molmil
Crystal structure of the enterovirus 71 polymerase elongation complex (C0S6M form)
Descriptor: Genome polyprotein, RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*A)-3'), ...
Authors:Li, R, Wang, M, Jing, X, Gong, P.
Deposit date:2020-01-17
Release date:2020-04-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Stringent control of the RNA-dependent RNA polymerase translocation revealed by multiple intermediate structures.
Nat Commun, 11, 2020
6LSH
DownloadVisualize
BU of 6lsh by Molmil
Crystal structure of the enterovirus 71 polymerase elongation complex (C2S6M form)
Descriptor: Genome polyprotein, RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*C)-3'), ...
Authors:Li, R, Wang, M, Jing, X, Gong, P.
Deposit date:2020-01-17
Release date:2020-04-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.231 Å)
Cite:Stringent control of the RNA-dependent RNA polymerase translocation revealed by multiple intermediate structures.
Nat Commun, 11, 2020
6LSF
DownloadVisualize
BU of 6lsf by Molmil
Crystal structure of the enterovirus 71 polymerase elongation complex (C2S6RA/C2S6RB form)
Descriptor: Genome polyprotein, RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*C)-3'), ...
Authors:Wang, M, Shu, B, Jing, X, Gong, P.
Deposit date:2020-01-17
Release date:2020-04-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.152 Å)
Cite:Stringent control of the RNA-dependent RNA polymerase translocation revealed by multiple intermediate structures.
Nat Commun, 11, 2020
6LSE
DownloadVisualize
BU of 6lse by Molmil
Crystal structure of the enterovirus 71 polymerase elongation complex (C3S6A/C3S6B form)
Descriptor: Genome polyprotein, PYROPHOSPHATE 2-, RNA (35-MER), ...
Authors:Wang, M, Shu, B, Jing, X, Gong, P.
Deposit date:2020-01-17
Release date:2020-04-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Stringent control of the RNA-dependent RNA polymerase translocation revealed by multiple intermediate structures.
Nat Commun, 11, 2020
2IJF
DownloadVisualize
BU of 2ijf by Molmil
Crystal Structure of the Poliovirus RNA-Dependent RNA Polymerase Fidelity Mutant 3Dpol G64S
Descriptor: RNA-directed RNA polymerase
Authors:Marcotte, L.L, Gohara, D.G, Filman, D.J, Hogle, J.M.
Deposit date:2006-09-29
Release date:2007-02-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of poliovirus 3CD: virally-encoded protease and precursor to the RNA-dependent RNA polymerase.
J.Virol., 81, 2007
2IM2
DownloadVisualize
BU of 2im2 by Molmil
Crystal structure of poliovirus polymerase complexed with UTP and Mg2+
Descriptor: ACETIC ACID, SODIUM ION, URIDINE 5'-TRIPHOSPHATE, ...
Authors:Thompson, A.A, Peersen, O.B.
Deposit date:2006-10-03
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Stabilization of Poliovirus Polymerase by NTP Binding and Fingers-Thumb Interactions.
J.Mol.Biol., 366, 2007
2ILY
DownloadVisualize
BU of 2ily by Molmil
Crystal structure of poliovirus polymerase complexed with ATP and Mg2+
Descriptor: ACETIC ACID, ADENOSINE-5'-TRIPHOSPHATE, Poliovirus polymerase, ...
Authors:Thompson, A.A, Peersen, O.B.
Deposit date:2006-10-03
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Stabilization of Poliovirus Polymerase by NTP Binding and Fingers-Thumb Interactions.
J.Mol.Biol., 366, 2007
2ILZ
DownloadVisualize
BU of 2ilz by Molmil
Crystal structure of poliovirus polymerase complexed with GTP and Mn2+
Descriptor: ACETIC ACID, GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ...
Authors:Thompson, A.A, Peersen, O.B.
Deposit date:2006-10-03
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Stabilization of Poliovirus Polymerase by NTP Binding and Fingers-Thumb Interactions.
J.Mol.Biol., 366, 2007
2IM0
DownloadVisualize
BU of 2im0 by Molmil
Crystal structure of poliovirus polymerase complexed with CTP and Mg2+
Descriptor: ACETIC ACID, CYTIDINE-5'-TRIPHOSPHATE, SODIUM ION, ...
Authors:Thompson, A.A, Peersen, O.B.
Deposit date:2006-10-03
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Stabilization of Poliovirus Polymerase by NTP Binding and Fingers-Thumb Interactions.
J.Mol.Biol., 366, 2007
2IM1
DownloadVisualize
BU of 2im1 by Molmil
Crystal structure of poliovirus polymerase complexed with CTP and Mn2+
Descriptor: ACETIC ACID, CYTIDINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ...
Authors:Thompson, A.A, Peersen, O.B.
Deposit date:2006-10-03
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Stabilization of Poliovirus Polymerase by NTP Binding and Fingers-Thumb Interactions.
J.Mol.Biol., 366, 2007
2IM3
DownloadVisualize
BU of 2im3 by Molmil
Crystal structure of poliovirus polymerase complexed with UTP and Mn2+
Descriptor: ACETIC ACID, MANGANESE (II) ION, SODIUM ION, ...
Authors:Thompson, A.A, Peersen, O.B.
Deposit date:2006-10-03
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Stabilization of Poliovirus Polymerase by NTP Binding and Fingers-Thumb Interactions.
J.Mol.Biol., 366, 2007

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon