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PDB: 325 results

1QHC
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CRYSTAL STRUCTURE OF RIBONUCLEASE A IN COMPLEX WITH 5'-PHOSPHO-2'-DEOXYURIDINE-3'-PYROPHOSPHATE ADENOSINE-3'-PHOSPHATE
Descriptor: ADENYLATE-3'-PHOSPHATE-[[2'-DEOXY-URIDINE-5'-PHOSPHATE]-3'-PHOSPHATE], PROTEIN (RIBONUCLEASE A)
Authors:Leonidas, D.D, Acharya, K.R.
Deposit date:1999-05-12
Release date:1999-08-31
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Toward rational design of ribonuclease inhibitors: high-resolution crystal structure of a ribonuclease A complex with a potent 3',5'-pyrophosphate-linked dinucleotide inhibitor.
Biochemistry, 38, 1999
2W5L
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BU of 2w5l by Molmil
RNASE A-NADP COMPLEX
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, RIBONUCLEASE PANCREATIC
Authors:Chavali, G.B, Holloway, D.E, Baker, M.D, Acharya, K.R.
Deposit date:2008-12-10
Release date:2009-02-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Influence of Naturally-Occurring 5'-Pyrophosphate-Linked Substituents on the Binding of Adenylic Inhibitors to Ribonuclease A: An X-Ray Crystallographic Study.
Biopolymers, 91, 2009
2G8R
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BU of 2g8r by Molmil
The crystal structure of the RNase A- 3-N-piperidine-4-carboxyl-3-deoxy-ara-uridine complex
Descriptor: 1-[3-(4-CARBOXYPIPERIDIN-1-YL)-3-DEOXY-BETA-D-ARABINOFURANOSYL]PYRIMIDINE-2,4(1H,3H)-DIONE, Ribonuclease pancreatic
Authors:Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G.
Deposit date:2006-03-03
Release date:2006-08-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The binding of 3'-N-piperidine-4-carboxyl-3'-deoxy-ara-uridine to ribonuclease A in the crystal.
Bioorg.Med.Chem., 14, 2006
1AFK
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CRYSTAL STRUCTURE OF RIBONUCLEASE A IN COMPLEX WITH 5'-DIPHOSPHOADENOSINE-3'-PHOSPHATE
Descriptor: 3'-PHOSPHATE-ADENOSINE-5'-DIPHOSPHATE, RIBONUCLEASE A
Authors:Leonidas, D.D, Acharya, K.R.
Deposit date:1997-03-08
Release date:1998-03-18
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of ribonuclease A complexes with 5'-diphosphoadenosine 3'-phosphate and 5'-diphosphoadenosine 2'-phosphate at 1.7 A resolution.
Biochemistry, 36, 1997
1C9V
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BU of 1c9v by Molmil
H12A VARIANT OF RIBONUCLEASE A
Descriptor: CHLORIDE ION, RIBONUCLEASE A
Authors:Park, C, Schultz, L.W, Raines, R.T.
Deposit date:1999-08-03
Release date:2001-06-27
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Contribution of the active site histidine residues of ribonuclease A to nucleic acid binding.
Biochemistry, 40, 2001
1RBD
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BU of 1rbd by Molmil
CRYSTALLOGRAPHIC STRUCTURES OF RIBONUCLEASE S VARIANTS WITH NONPOLAR SUBSTITUTION AT POSITION 13: PACKING AND CAVITIES
Descriptor: RIBONUCLEASE S (S-PEPTIDE), RIBONUCLEASE S (S-PROTEIN), SULFATE ION
Authors:Varadarajan, R, Richards, F.M.
Deposit date:1992-06-12
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallographic structures of ribonuclease S variants with nonpolar substitution at position 13: packing and cavities.
Biochemistry, 31, 1992
4G8V
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BU of 4g8v by Molmil
Crystal structure of Ribonuclease A in complex with 5a
Descriptor: 1-{[1-(alpha-L-arabinofuranosyl)-1H-1,2,3-triazol-4-yl]methyl}-2,4-dioxo-1,2,3,4-tetrahydropyrimidine, Ribonuclease pancreatic
Authors:Chatzileontiadou, D.S.M, Kantsadi, A.L, Leonidas, D.D.
Deposit date:2012-07-23
Release date:2012-11-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Triazole pyrimidine nucleosides as inhibitors of Ribonuclease A. Synthesis, biochemical, and structural evaluation.
Bioorg.Med.Chem., 20, 2012
1RBH
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BU of 1rbh by Molmil
CRYSTALLOGRAPHIC STRUCTURES OF RIBONUCLEASE S VARIANTS WITH NONPOLAR SUBSTITUTION AT POSITION 13: PACKING AND CAVITIES
Descriptor: RIBONUCLEASE S (S-PEPTIDE), RIBONUCLEASE S (S-PROTEIN), SULFATE ION
Authors:Varadarajan, R, Richards, F.M.
Deposit date:1992-06-12
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallographic structures of ribonuclease S variants with nonpolar substitution at position 13: packing and cavities.
Biochemistry, 31, 1992
7Z6G
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BU of 7z6g by Molmil
X-ray structure of the adduct obtained upon reaction of [Rh2(OCOCH3)(OCOCF3)3] with RNase A (2)
Descriptor: (mi2-acetato-O, O')-hexaaquo-dirhodium (II), Rhodium, ...
Authors:Loreto, D, Merlino, A.
Deposit date:2022-03-11
Release date:2023-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Reactivity of a fluorine-containing dirhodium tetracarboxylate compound with proteins
Dalton Trans, 51, 2022
3D8Y
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BU of 3d8y by Molmil
RNase A- 5'-Deoxy-5'-N-piperidinothymidine complex
Descriptor: 5'-deoxy-5'-piperidin-1-ylthymidine, CITRATE ANION, Ribonuclease pancreatic
Authors:Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G.
Deposit date:2008-05-26
Release date:2009-02-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Morpholino, piperidino, and pyrrolidino derivatives of pyrimidine nucleosides as inhibitors of ribonuclease A: synthesis, biochemical, and crystallographic evaluation
J.Med.Chem., 52, 2009
2XOI
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Functional and Structural Analyses of N-Acylsulfonamide-Linked Dinucleoside Inhibitors of Ribonuclease A
Descriptor: (2S,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-N-[[(2S,3S,4R,5R)-5-(2,4-DIOXOPYRIMIDIN-1-YL)-4-HYDROXY-2-(HYDROXYMETHYL)OXOLAN-3-YL]METHYLSULFONYL]-3,4-DIHYDROXY-OXOLANE-2-CARBOXAMIDE, RIBONUCLEASE PANCREATIC
Authors:Thiyagarajan, N, Smith, B.D, Raines, R.T, Acharya, K.R.
Deposit date:2010-08-17
Release date:2011-01-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Functional and Structural Analyses of N-Acylsulfonamide-Linked Dinucleoside Inhibitors of Ribonuclease A.
FEBS J., 278, 2011
2XOG
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Functional and Structural Analyses of N-Acylsulfonamide-Linked Dinucleoside Inhibitors of Ribonuclease A
Descriptor: (2S,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-N-[[(2S,3S,4R,5R)-5-(2,4-DIOXOPYRIMIDIN-1-YL)-4-HYDROXY-2-(HYDROXYMETHYL)OXOLAN-3-YL]METHYLSULFONYL]-3,4-DIHYDROXY-OXOLANE-2-CARBOXAMIDE, RIBONUCLEASE PANCREATIC
Authors:Thiyagarajan, N, Smith, B.D, Raines, R.T, Acharya, K.R.
Deposit date:2010-08-16
Release date:2011-01-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Functional and Structural Analyses of N-Acylsulfonamide-Linked Dinucleoside Inhibitors of Ribonuclease A.
FEBS J., 278, 2011
4POU
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VHH-metal in Complex with RNase A
Descriptor: Ribonuclease pancreatic, VHH Antibody
Authors:Fanning, S.W, Walter, R, Horn, J.R.
Deposit date:2014-02-26
Release date:2014-09-24
Last modified:2014-10-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis of an engineered dual-specific antibody: conformational diversity leads to a hypervariable loop metal-binding site.
Protein Eng.Des.Sel., 27, 2014
3QSK
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BU of 3qsk by Molmil
5 Histidine Variant of the anti-RNase A VHH in Complex with RNAse A
Descriptor: Engineered 5 Histidine anti-RNase A Camelid VHH Antibody Domain Variant, Ribonuclease pancreatic
Authors:Murtaugh, M.L, Fanning, S.W, Sharma, T.M, Terry, A.M, Horn, J.R.
Deposit date:2011-02-21
Release date:2011-08-10
Last modified:2011-11-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A combinatorial histidine scanning library approach to engineer highly pH-dependent protein switches.
Protein Sci., 20, 2011
1RBE
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BU of 1rbe by Molmil
CRYSTALLOGRAPHIC STRUCTURES OF RIBONUCLEASE S VARIANTS WITH NONPOLAR SUBSTITUTION AT POSITION 13: PACKING AND CAVITIES
Descriptor: RIBONUCLEASE S (S-PEPTIDE), RIBONUCLEASE S (S-PROTEIN), SULFATE ION
Authors:Varadarajan, R, Richards, F.M.
Deposit date:1992-06-12
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystallographic structures of ribonuclease S variants with nonpolar substitution at position 13: packing and cavities.
Biochemistry, 31, 1992
3EV6
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BU of 3ev6 by Molmil
Crystal Structure of Ribonuclease A in 50% R,S,R-Bisfuranol
Descriptor: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-ol, Ribonuclease pancreatic
Authors:Dechene, M, Wink, G, Smith, M, Swartz, P, Mattos, C.
Deposit date:2008-10-12
Release date:2009-06-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Multiple solvent crystal structures of ribonuclease A: An assessment of the method
Proteins, 76, 2009
3EV0
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BU of 3ev0 by Molmil
Crystal Structure of Ribonuclease A in 70% Dimethyl Sulfoxide
Descriptor: DIMETHYL SULFOXIDE, Ribonuclease pancreatic
Authors:Dechene, M, Wink, G, Smith, M, Swartz, P, Mattos, C.
Deposit date:2008-10-12
Release date:2009-06-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Multiple solvent crystal structures of ribonuclease A: An assessment of the method
Proteins, 76, 2009
4J68
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Crystal structure of Ribonuclease A soaked in 40% Isopropanol: One of twelve in MSCS set
Descriptor: ISOPROPYL ALCOHOL, Ribonuclease pancreatic, SULFATE ION
Authors:Kearney, B.M, Dechene, M, Swartz, P.D, Mattos, C.
Deposit date:2013-02-11
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.779 Å)
Cite:DRoP: A program for analysis of water structure on protein surfaces
to be published
1JVU
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BU of 1jvu by Molmil
CRYSTAL STRUCTURE OF RIBONUCLEASE A (COMPLEXED FORM)
Descriptor: CYTIDINE-2'-MONOPHOSPHATE, RIBONUCLEASE A
Authors:Vitagliano, L, Merlino, A, Zagari, A, Mazzarella, L.
Deposit date:2001-08-31
Release date:2002-06-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Reversible Substrate-Induced Domain Motions in Ribonuclease A
Proteins, 46, 2002
7Q7B
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BU of 7q7b by Molmil
Room temperature structure of RNase A at atmospheric pressure in a sapphire capillary after high helium gas pressure release
Descriptor: CHLORIDE ION, Ribonuclease pancreatic, SODIUM ION, ...
Authors:Lieske, J, Guenther, S, Saouane, S, Meents, A.
Deposit date:2021-11-09
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Fixed-target high-pressure macromolecular crystallography
To Be Published
5OLD
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BU of 5old by Molmil
X-ray structure of the adduct formed upon reaction of ribonuclease A with a tetranuclear Pt-thiosemicarbazone compound
Descriptor: DIMETHYL SULFOXIDE, PLATINUM (II) ION, Ribonuclease pancreatic
Authors:Ferraro, G, Merlino, A.
Deposit date:2017-07-27
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Reactions of a tetranuclear Pt-thiosemicarbazone complex with model proteins.
J. Inorg. Biochem., 181, 2018
4J64
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BU of 4j64 by Molmil
Crystal structure of Ribonuclease A soaked in 40% Dioxane: One of twelve in MSCS set
Descriptor: 1,4-DIETHYLENE DIOXIDE, Ribonuclease pancreatic, SULFATE ION
Authors:Kearney, B.M, Dechene, M, Swartz, P.D, Mattos, C.
Deposit date:2013-02-11
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.781 Å)
Cite:DRoP: A program for analysis of water structure on protein surfaces
to be published
5JLG
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BU of 5jlg by Molmil
The X-ray structure of the adduct formed in the reaction between bovine pancreatic ribonuclease and compound I, a piano-stool organometallic Ru(II) arene compound containing an O,S-chelating ligand
Descriptor: DIMETHYL SULFOXIDE, RUTHENIUM ION, Ribonuclease pancreatic, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2016-04-27
Release date:2016-08-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Unusual mode of protein binding by a cytotoxic pi-arene ruthenium(ii) piano-stool compound containing an O,S-chelating ligand.
Dalton Trans, 45, 2016
8FHM
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BU of 8fhm by Molmil
RNase A-Uridine 5'-Hexaphosphate (RNaseA.p6U)
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy{[(R)-hydroxy{[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]oxy}phosphoryl]oxy}phosphoryl]oxy}phosphoryl]uridine, Ribonuclease pancreatic
Authors:Park, G, Cummins, C.
Deposit date:2022-12-14
Release date:2023-12-20
Method:SOLUTION SCATTERING (1.79 Å), X-RAY DIFFRACTION
Cite:Experimental and Computational Studies for the Effect of Lengthening the Phosphate Chain of Nucleotide on the RNase A inhibitors.
To Be Published
4ZZ4
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BU of 4zz4 by Molmil
Neutron crystal structure of ribonuclease A determined by the real space D/H contrast method
Descriptor: ISOPROPYL ALCOHOL, Ribonuclease pancreatic
Authors:Chatake, T, Fujiwara, S.
Deposit date:2015-05-22
Release date:2016-04-06
Last modified:2023-11-08
Method:NEUTRON DIFFRACTION (1.798 Å)
Cite:A technique for determining the deuterium/hydrogen contrast map in neutron macromolecular crystallography
Acta Crystallogr D Struct Biol, 72, 2016

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