Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 366 件
8J8D
DownloadVisualize
BU of 8j8d by Molmil
Crystal structure of SRCR domain 11 of DMBT1
分子名称: CHLORIDE ION, Deleted in malignant brain tumors 1 protein
著者Zhang, C, Lu, P, Nagata, K.
登録日2023-05-01
公開日2023-12-13
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Crystal structure of SRCR domain 11 of DMBT1
To Be Published
8J8T
DownloadVisualize
BU of 8j8t by Molmil
Crystal structure of calcium-saturated SRCR domain 11 of DMBT1
分子名称: CALCIUM ION, Deleted in malignant brain tumors 1 protein
著者Zhang, C, Lu, P, Nagata, K.
登録日2023-05-02
公開日2023-12-13
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Crystal structure of Calcium-saturated SRCR domain 11 of SALSA
To Be Published
7BYY
DownloadVisualize
BU of 7byy by Molmil
Crystal structure of bacterial toxin
分子名称: Acetyltransferase
著者Zhang, C, Yashiro, Y, Tomita, K.
登録日2020-04-25
公開日2020-06-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.799 Å)
主引用文献Substrate specificities of Escherichia coli ItaT that acetylates aminoacyl-tRNAs.
Nucleic Acids Res., 48, 2020
7V4R
DownloadVisualize
BU of 7v4r by Molmil
The crystal structure of KFDV NS3H bound with Pi
分子名称: NICKEL (II) ION, PHOSPHATE ION, Serine protease NS3
著者Zhang, C.Y, Jin, T.C.
登録日2021-08-14
公開日2022-08-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Kyasanur Forest disease virus NS3 helicase: Insights into structure, activity, and inhibitors.
Int.J.Biol.Macromol., 2023
7BXX
DownloadVisualize
BU of 7bxx by Molmil
Tetanus neurotoxin translocation domain -C467S
分子名称: Tetanus toxin
著者Zhang, C.M, Imoto, Y, Fukuda, Y, Yamashita, E, Inoue, T.
登録日2020-04-21
公開日2021-02-17
最終更新日2023-11-29
実験手法SOLUTION SCATTERING (2.34 Å), X-RAY DIFFRACTION
主引用文献Structural flexibility of the tetanus neurotoxin revealed by crystallographic and solution scattering analyses.
J Struct Biol X, 5, 2021
7BY4
DownloadVisualize
BU of 7by4 by Molmil
Tetanus neurotoxin receptor binding domain
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, SODIUM ION, ...
著者Zhang, C.M, Imoto, Y, Inoue, T.
登録日2020-04-21
公開日2021-02-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural flexibility of the tetanus neurotoxin revealed by crystallographic and solution scattering analyses.
J Struct Biol X, 5, 2021
7BY5
DownloadVisualize
BU of 7by5 by Molmil
Tetanus neurotoxin mutant-(H233A/E234Q/H237A/Y375F)
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
著者Zhang, C.M, Imoto, Y, Fukuda, Y, Yamashita, E, Inoue, T.
登録日2020-04-21
公開日2021-02-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Structural flexibility of the tetanus neurotoxin revealed by crystallographic and solution scattering analyses.
J Struct Biol X, 5, 2021
7V4Q
DownloadVisualize
BU of 7v4q by Molmil
The crystal structure of the apo form of KFDV NS3H
分子名称: Serine protease NS3
著者Zhang, C.Y, Jin, T.C.
登録日2021-08-14
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Kyasanur Forest disease virus NS3 helicase: Insights into structure, activity, and inhibitors.
Int.J.Biol.Macromol., 2023
6FD2
DownloadVisualize
BU of 6fd2 by Molmil
Radical SAM 1,2-diol dehydratase AprD4 in complex with its substrate paromamine
分子名称: 5'-DEOXYADENOSINE, IRON/SULFUR CLUSTER, METHIONINE, ...
著者Liu, W.Q, Amara, P, Mouesca, J.M, Ji, X, Renoux, O, Martin, L, Zhang, C, Zhang, Q, Nicolet, Y.
登録日2017-12-21
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献1,2-Diol Dehydration by the Radical SAM Enzyme AprD4: A Matter of Proton Circulation and Substrate Flexibility.
J. Am. Chem. Soc., 140, 2018
4XV3
DownloadVisualize
BU of 4xv3 by Molmil
B-Raf Kinase V600E oncogenic mutant in complex with PLX7922
分子名称: N'-{3-[5-(2-aminopyrimidin-4-yl)-2-tert-butyl-1,3-thiazol-4-yl]-2-fluorophenyl}-N-ethyl-N-methylsulfuric diamide, Serine/threonine-protein kinase B-raf
著者Zhang, Y, Zhang, C.
登録日2015-01-26
公開日2015-10-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献RAF inhibitors that evade paradoxical MAPK pathway activation.
Nature, 526, 2015
4XV9
DownloadVisualize
BU of 4xv9 by Molmil
B-Raf Kinase domain in complex with PLX5568
分子名称: N-{3-[(5-chloro-1H-pyrrolo[2,3-b]pyridin-3-yl)carbonyl]-2,4-difluorophenyl}-4-(trifluoromethyl)benzenesulfonamide, SULFATE ION, Serine/threonine-protein kinase B-raf
著者zhang, Y, zhang, c, wang, w.
登録日2015-01-26
公開日2015-10-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献RAF inhibitors that evade paradoxical MAPK pathway activation.
Nature, 526, 2015
6PGI
DownloadVisualize
BU of 6pgi by Molmil
Asymmetric functions of a binuclear metal cluster within the transport pathway of the ZIP transition metal transporters
分子名称: BbZIP, CADMIUM ION
著者Zhang, T, Sui, D, Zhang, C, Logan, T, Hu, J.
登録日2019-06-24
公開日2019-12-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Asymmetric functions of a binuclear metal center within the transport pathway of a human zinc transporter ZIP4.
Faseb J., 34, 2020
4XV1
DownloadVisualize
BU of 4xv1 by Molmil
B-Raf Kinase V600E oncogenic mutant in complex with PLX7904
分子名称: N'-(3-{[5-(2-cyclopropylpyrimidin-5-yl)-1H-pyrrolo[2,3-b]pyridin-3-yl]carbonyl}-2,4-difluorophenyl)-N-ethyl-N-methylsulfuric diamide, Serine/threonine-protein kinase B-raf
著者Zhang, Y, Zhang, C.
登録日2015-01-26
公開日2015-10-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献RAF inhibitors that evade paradoxical MAPK pathway activation.
Nature, 526, 2015
5MJA
DownloadVisualize
BU of 5mja by Molmil
Kinase domain of human EphB1 bound to a quinazoline-based inhibitor
分子名称: 2-chloranyl-~{N}-[4-[(2-chloranyl-5-oxidanyl-phenyl)amino]quinazolin-7-yl]ethanamide, Ephrin type-B receptor 1, SULFATE ION
著者Kung, A, Schimpl, M, Chen, Y.-C, Overman, R.C, Zhang, C.
登録日2016-11-30
公開日2017-05-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献A Chemical-Genetic Approach to Generate Selective Covalent Inhibitors of Protein Kinases.
ACS Chem. Biol., 12, 2017
6S8H
DownloadVisualize
BU of 6s8h by Molmil
Cryo-EM structure of LptB2FG in complex with LPS
分子名称: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-5-[(2~{S},3~{S},4~{R},5~{R},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-4-[(2~{R},3~{S},4~{R},5~{S},6~{R})-6-[(1~{S})-2-[(2~{S},3~{S},4~{S},5~{S},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-1-oxidanyl-ethyl]-3,4-bis(oxidanyl)-5-phosphonooxy-oxan-2-yl]oxy-3-oxidanyl-5-phosphonooxy-oxan-2-yl]oxy-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, DODECYL-BETA-D-MALTOSIDE, ...
著者Tang, X.D, Chang, S.H, Luo, Q.H, Zhang, Z.Y, Qiao, W, Xu, C.H, Zhang, C.B, Niu, Y, Yang, W.X, Wang, T, Zhang, Z.B, Zhu, X.F, Dong, C.J, Zhang, X, Dong, H.H.
登録日2019-07-10
公開日2019-09-25
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structures of lipopolysaccharide transporter LptB2FGC in lipopolysaccharide or AMP-PNP-bound states reveal its transport mechanism.
Nat Commun, 10, 2019
6S8N
DownloadVisualize
BU of 6s8n by Molmil
Cryo-EM structure of LptB2FGC in complex with lipopolysaccharide
分子名称: 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, DODECYL-BETA-D-MALTOSIDE, Inner membrane protein yjgQ, ...
著者Tang, X.D, Chang, S.H, Luo, Q.H, Zhang, Z.Y, Qiao, W, Xu, C.H, Zhang, C.B, Niu, Y, Yang, W.X, Wang, T, Zhang, Z.B, Zhu, X.F, Dong, C.J, Zhang, X, Dong, H.H.
登録日2019-07-10
公開日2019-09-25
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Cryo-EM structures of lipopolysaccharide transporter LptB2FGC in lipopolysaccharide or AMP-PNP-bound states reveal its transport mechanism.
Nat Commun, 10, 2019
4XV2
DownloadVisualize
BU of 4xv2 by Molmil
B-Raf Kinase V600E oncogenic mutant in complex with Dabrafenib
分子名称: Dabrafenib, Serine/threonine-protein kinase B-raf
著者zhang, Y, zhang, c.
登録日2015-01-26
公開日2015-10-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献RAF inhibitors that evade paradoxical MAPK pathway activation.
Nature, 526, 2015
3R5S
DownloadVisualize
BU of 3r5s by Molmil
Crystal structure of apo-ViuP
分子名称: Ferric vibriobactin ABC transporter, periplasmic ferric vibriobactin-binding protein
著者Li, N, Zhang, C, Li, B, Liu, X, Huang, Y, Xu, S, Gu, L.
登録日2011-03-19
公開日2012-02-08
最終更新日2012-05-30
実験手法X-RAY DIFFRACTION (1.791 Å)
主引用文献Unique iron coordination in iron-chelating molecule vibriobactin helps Vibrio cholerae evade mammalian siderocalin-mediated immune response.
J.Biol.Chem., 287, 2012
5MJB
DownloadVisualize
BU of 5mjb by Molmil
Kinase domain of human EphB1, G703C mutant, covalently bound to a quinazoline-based inhibitor
分子名称: 2-chloranyl-~{N}-[4-[(2-chloranyl-5-oxidanyl-phenyl)amino]quinazolin-7-yl]ethanamide, Ephrin type-B receptor 1, SULFATE ION
著者Kung, A, Schimpl, M, Chen, Y.-C, Overman, R.C, Zhang, C.
登録日2016-11-30
公開日2017-05-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献A Chemical-Genetic Approach to Generate Selective Covalent Inhibitors of Protein Kinases.
ACS Chem. Biol., 12, 2017
6IJI
DownloadVisualize
BU of 6iji by Molmil
Crystal structure of PDE10 in complex with inhibitor 2b
分子名称: 2-{2-[5-methyl-1-(pyridin-4-yl)-1H-benzimidazol-2-yl]ethyl}-1H-benzo[de]isoquinoline-1,3(2H)-dione, MAGNESIUM ION, ZINC ION, ...
著者Huang, Y.Y, Yu, Y.F, Zhang, C, Wu, D, Wu, Y, Luo, H.B.
登録日2018-10-10
公開日2019-04-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Validation of Phosphodiesterase-10 as a Novel Target for Pulmonary Arterial Hypertension via Highly Selective and Subnanomolar Inhibitors.
J. Med. Chem., 62, 2019
6IJH
DownloadVisualize
BU of 6ijh by Molmil
Crystal structure of PDE10 in complex with inhibitor AF-399/14387019
分子名称: 2-[2-(4-phenyl-5-sulfanylidene-4,5-dihydro-1H-1,2,4-triazol-3-yl)ethyl]-1H-benzo[de]isoquinoline-1,3(2H)-dione, MAGNESIUM ION, ZINC ION, ...
著者Huang, Y.Y, Yu, Y.F, Zhang, C, Wu, D, Wu, Y, Luo, H.B.
登録日2018-10-10
公開日2019-04-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Validation of Phosphodiesterase-10 as a Novel Target for Pulmonary Arterial Hypertension via Highly Selective and Subnanomolar Inhibitors.
J. Med. Chem., 62, 2019
5X9X
DownloadVisualize
BU of 5x9x by Molmil
Solution structure of heterodimeric coiled-coil domain of Drosophila GABAB receptor 1 and 2
分子名称: Metabotropic GABA-B receptor subtype 1, Metabotropic GABA-B receptor subtype 2
著者Liu, X, Zhang, S, Liu, J, Zhang, C.X.
登録日2017-03-10
公開日2018-03-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of heterodimeric coiled-coil domain of Drosophila GABAB receptor 1 and 2
To Be Published
4YRV
DownloadVisualize
BU of 4yrv by Molmil
Crystal structure of Anabaena transcription factor HetR complexed with 21-bp DNA from hetP promoter
分子名称: CALCIUM ION, DNA (5'-D(P*AP*TP*GP*AP*GP*GP*GP*GP*TP*TP*AP*GP*AP*CP*CP*CP*CP*TP*CP*GP*C)-3'), DNA (5'-D(P*GP*CP*GP*AP*GP*GP*GP*GP*TP*CP*TP*AP*AP*CP*CP*CP*CP*TP*CP*AP*T)-3'), ...
著者Hu, H.X, Jiang, Y.L, Zhao, M.X, Zhang, C.C, Chen, Y, Zhou, C.Z.
登録日2015-03-16
公開日2015-12-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into HetR-PatS interaction involved in cyanobacterial pattern formation
Sci Rep, 5, 2015
4YNL
DownloadVisualize
BU of 4ynl by Molmil
Crystal structure of the hood domain of Anabaena HetR in complex with the hexapeptide ERGSGR derived from PatS
分子名称: Heterocyst differentiation control protein, Heterocyst inhibition-signaling peptide
著者Hu, H.X, Jiang, Y.L, Zhao, M.X, Zhang, C.C, Chen, Y, Zhou, C.Z.
登録日2015-03-10
公開日2015-12-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insights into HetR-PatS interaction involved in cyanobacterial pattern formation
Sci Rep, 5, 2015
2L6G
DownloadVisualize
BU of 2l6g by Molmil
FAT-LD2 Double labeled construct with free LD4 peptide
分子名称: Focal adhesion kinase 1, linker, Paxillin
著者Bertolucci, C.M, Guibao, C, Zhang, C, Zheng, J.
登録日2010-11-19
公開日2012-05-30
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Fat-Ld2 Double Labeled Construct with Free Ld4 Peptide
To be Published

225158

件を2024-09-18に公開中

PDB statisticsPDBj update infoContact PDBjnumon