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PDB: 1689 results

4G7Z
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BU of 4g7z by Molmil
Crystal structure of Thermus thermophilus transcription initiation complex containing 5-BrU at template-strand position +1
Descriptor: 5'-D(*CP*CP*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*(BRU)P*CP*GP*AP*GP*GP*G)-3', 5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*AP*GP*G)-3', DNA-directed RNA polymerase subunit alpha, ...
Authors:Zhang, Y, Ebright, R.H.
Deposit date:2012-07-20
Release date:2012-10-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.815 Å)
Cite:Structural basis of transcription initiation.
Science, 338, 2012
6LN6
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BU of 6ln6 by Molmil
CryoEM structure of SERCA2b T1032stop in E1-2Ca2+-AMPPCP (class2)
Descriptor: CALCIUM ION, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Zhang, Y, Tsutsumi, A, Watanabe, S, Inaba, K.
Deposit date:2019-12-28
Release date:2020-08-26
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail.
Sci Adv, 6, 2020
2MNZ
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BU of 2mnz by Molmil
NMR Structure of KDM5B PHD1 finger in complex with H3K4me0(1-10aa)
Descriptor: H3K4me0, Lysine-specific demethylase 5B, ZINC ION
Authors:Zhang, Y, Yang, H.R, Guo, X, Rong, N.Y, Song, Y.J, Xu, Y.W, Lan, W.X, Xu, Y.H, Cao, C.
Deposit date:2014-04-16
Release date:2014-08-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The PHD1 finger of KDM5B recognizes unmodified H3K4 during the demethylation of histone H3K4me2/3 by KDM5B.
Protein Cell, 5, 2014
2MNY
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BU of 2mny by Molmil
NMR Structure of KDM5B PHD1 finger
Descriptor: Lysine-specific demethylase 5B, ZINC ION
Authors:Zhang, Y, Yang, H.R, Guo, X, Rong, N.Y, Song, Y.J, Xu, Y.W, Lan, W.X, Xu, Y.H, Cao, C.
Deposit date:2014-04-16
Release date:2014-08-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The PHD1 finger of KDM5B recognizes unmodified H3K4 during the demethylation of histone H3K4me2/3 by KDM5B.
Protein Cell, 5, 2014
8J57
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BU of 8j57 by Molmil
Cryo-EM structure of Mycobacterium tuberculosis ATP synthase Fo in complex with bedaquiline(BDQ)
Descriptor: ATP synthase subunit a, ATP synthase subunit c, Bedaquiline
Authors:Zhang, Y, Lai, Y, Liu, F, Rao, Z, Gong, H.
Deposit date:2023-04-21
Release date:2024-05-01
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Inhibition of M. tuberculosis and human ATP synthase by BDQ and TBAJ-587.
Nature, 631, 2024
8J58
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BU of 8j58 by Molmil
Cryo-EM structure of Mycobacterium tuberculosis ATP synthase Fo in the apo-form
Descriptor: ATP synthase subunit a, ATP synthase subunit c
Authors:Zhang, Y, Lai, Y, Liu, F, Rao, Z, Gong, H.
Deposit date:2023-04-21
Release date:2024-05-01
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Inhibition of M. tuberculosis and human ATP synthase by BDQ and TBAJ-587.
Nature, 631, 2024
2KHT
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BU of 2kht by Molmil
NMR Structure of human alpha defensin HNP-1
Descriptor: Neutrophil defensin 1
Authors:Zhang, Y, Li, S, Doherty, T.F, Lubkowski, J, Lu, W, Li, J, Barinka, C, Hong, M.
Deposit date:2009-04-11
Release date:2010-02-09
Last modified:2024-05-01
Method:SOLID-STATE NMR
Cite:Resonance assignment and three-dimensional structure determination of a human alpha-defensin, HNP-1, by solid-state NMR.
J.Mol.Biol., 397, 2010
8J0S
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BU of 8j0s by Molmil
Cryo-EM structure of Mycobacterium tuberculosis ATP synthase in complex with bedaquiline(BDQ)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Zhang, Y, Lai, Y, Liu, F, Rao, Z, Gong, H.
Deposit date:2023-04-11
Release date:2024-05-22
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Inhibition of M. tuberculosis and human ATP synthase by BDQ and TBAJ-587.
Nature, 631, 2024
4ES7
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BU of 4es7 by Molmil
crystal structure of protein HC from Homo sapiens at 2 angstrom
Descriptor: DI(HYDROXYETHYL)ETHER, Protein AMBP
Authors:Zhang, Y.L, Gao, Z.Q, Wang, D.Q, Dong, Y.H.
Deposit date:2012-04-22
Release date:2013-04-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:crystal structure of protein HC from Home sapiens at 2 angstrom
To be Published
2LLQ
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BU of 2llq by Molmil
Solution nmr-derived structure of calmodulin c-lobe bound with er alpha peptide
Descriptor: CALCIUM ION, Calmodulin, Estrogen receptor
Authors:Zhang, Y.
Deposit date:2011-11-15
Release date:2012-02-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis for Ca2+-induced activation and dimerization of estrogen receptor alpha by calmodulin.
J.Biol.Chem., 287, 2012
2LRJ
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BU of 2lrj by Molmil
NMR solution structure of staphyloxanthin biosynthesis protein
Descriptor: Staphyloxanthin biosynthesis protein, putative
Authors:Zhang, Y, Winsor, J, Anderson, W, Radhakrishnan, I, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-04-03
Release date:2012-04-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of a putative S. aureus enzyme involved in the biosynthesis of staphyloxanthin
To be Published
8JR0
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BU of 8jr0 by Molmil
Cryo-EM structure of Mycobacterium tuberculosis ATP synthase in complex with TBAJ-587
Descriptor: (1~{S},2~{S})-1-(6-bromanyl-2-methoxy-quinolin-3-yl)-2-(2,6-dimethoxypyridin-4-yl)-4-(dimethylamino)-1-(2-fluoranyl-3-methoxy-phenyl)butan-2-ol, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Zhang, Y, Lai, Y, Liu, F, Rao, Z, Gong, H.
Deposit date:2023-06-15
Release date:2024-05-01
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Inhibition of M. tuberculosis and human ATP synthase by BDQ and TBAJ-587.
Nature, 631, 2024
2LBC
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BU of 2lbc by Molmil
solution structure of tandem UBA of USP13
Descriptor: Ubiquitin carboxyl-terminal hydrolase 13
Authors:Zhang, Y, Zhou, C, Zhou, Z, Song, A, Hu, H.
Deposit date:2011-03-29
Release date:2012-03-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Domain Analysis Reveals That a Deubiquitinating Enzyme USP13 Performs Non-Activating Catalysis for Lys63-Linked Polyubiquitin.
Plos One, 6, 2011
8JR1
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BU of 8jr1 by Molmil
Cryo-EM structure of Mycobacterium tuberculosis ATP synthase Fo in complex with TBAJ-587
Descriptor: (1~{S},2~{S})-1-(6-bromanyl-2-methoxy-quinolin-3-yl)-2-(2,6-dimethoxypyridin-4-yl)-4-(dimethylamino)-1-(2-fluoranyl-3-methoxy-phenyl)butan-2-ol, ATP synthase subunit a, ATP synthase subunit c
Authors:Zhang, Y, Lai, Y, Liu, F, Rao, Z, Gong, H.
Deposit date:2023-06-15
Release date:2024-05-01
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Inhibition of M. tuberculosis and human ATP synthase by BDQ and TBAJ-587.
Nature, 631, 2024
4FD3
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BU of 4fd3 by Molmil
Crystal structure of apo-formed ymtOAR1
Descriptor: 3-oxoacyl-[acyl-carrier-protein] reductase
Authors:Zhang, Y, Gao, Y, Ning, F, Niu, L, Teng, M.
Deposit date:2012-05-26
Release date:2013-06-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of apo-formed ymtOAR1
To be Published
4G7O
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BU of 4g7o by Molmil
Crystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNA
Descriptor: 5'-D(*CP*CP*T*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*G)-3', 5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*AP*GP*G)-3', 5'-R(*GP*A)-3', ...
Authors:Zhang, Y, Ebright, R.H.
Deposit date:2012-07-20
Release date:2012-10-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.993 Å)
Cite:Structural basis of transcription initiation.
Science, 338, 2012
5Z1W
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BU of 5z1w by Molmil
Cryo-EM structure of polycystic kidney disease-like channel PKD2L1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Polycystic kidney disease 2-like 1 protein
Authors:Zhang, Y.Q.
Deposit date:2017-12-28
Release date:2018-03-28
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Cryo-EM structure of the polycystic kidney disease-like channel PKD2L1.
Nat Commun, 9, 2018
2MES
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BU of 2mes by Molmil
Backbone 1H, 13C, 15N resonance assignments of calcium-bound calmodulin in complex with PSD95 N-terminal peptide
Descriptor: CALCIUM ION, Calmodulin, Disks large homolog 4
Authors:Zhang, Y, Ames, J.B.
Deposit date:2013-09-26
Release date:2014-12-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Capping of the N-terminus of PSD-95 by calmodulin triggers its postsynaptic release.
Embo J., 33, 2014
5V21
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BU of 5v21 by Molmil
Crystal structure of human SETD2 SET-domain in complex with H3K36M peptide and SAM
Descriptor: Histone H3K36M peptide, Histone-lysine N-methyltransferase SETD2, S-ADENOSYLMETHIONINE, ...
Authors:Zhang, Y, Tong, L.
Deposit date:2017-03-02
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.415 Å)
Cite:Molecular basis for the role of oncogenic histone mutations in modulating H3K36 methylation.
Sci Rep, 7, 2017
5VAI
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BU of 5vai by Molmil
Cryo-EM structure of the activated Glucagon-like peptide-1 receptor in complex with G protein
Descriptor: Glucagon-like peptide 1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhang, Y, Sun, B, Feng, D, Hu, H, Chu, M, Qu, Q, Tarrasch, J.T, Li, S, Kobilka, T.S, Kobilka, B.K, Skiniotis, G.
Deposit date:2017-03-27
Release date:2017-05-24
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structure of the activated GLP-1 receptor in complex with a G protein.
Nature, 546, 2017
5V22
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BU of 5v22 by Molmil
Crystal structure of human SETD2 SET-domain in complex with H3K36M peptide and SAH
Descriptor: Histone H3K36M peptide, Histone-lysine N-methyltransferase SETD2, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Zhang, Y, Tong, L.
Deposit date:2017-03-02
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular basis for the role of oncogenic histone mutations in modulating H3K36 methylation.
Sci Rep, 7, 2017
2L3M
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BU of 2l3m by Molmil
Solution structure of the putative copper-ion-binding protein from Bacillus anthracis str. Ames
Descriptor: Copper-ion-binding protein
Authors:Zhang, Y, Winsor, J, Dubrovska, I, Anderson, W, Radhakrishnan, I, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-09-16
Release date:2011-01-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:To be published
To be Published
2LD5
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BU of 2ld5 by Molmil
Solution NMR-derived complex structure of Hoxa13 DNA binding domain bound to DNA
Descriptor: DNA (5'-D(*CP*AP*AP*AP*TP*AP*AP*AP*AP*TP*C)-3'), DNA (5'-D(P*GP*AP*TP*TP*TP*TP*AP*TP*TP*TP*G)-3'), Homeobox protein Hox-A13
Authors:Zhang, Y.
Deposit date:2011-05-14
Release date:2011-08-10
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis for sequence specific DNA binding and protein dimerization of HOXA13.
Plos One, 6, 2011
4H6P
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BU of 4h6p by Molmil
Crystal structure of a putative chromate reductase from Gluconacetobacter hansenii, Gh-ChrR, containing a R101A substitution.
Descriptor: Chromate reductase, FLAVIN MONONUCLEOTIDE
Authors:Zhang, Y, Robinson, H, Buchko, G.W.
Deposit date:2012-09-19
Release date:2012-10-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.556 Å)
Cite:Mechanistic insights of chromate and uranyl reduction by the NADPH-dependent FMN reductase, ChrR, from Gluconacetobacter hansenii
To be Published
4L13
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BU of 4l13 by Molmil
Crystal structure of Ligand Free EGFP-based Calcium Sensor CatchER
Descriptor: ACETIC ACID, EGFP-based Calcium Sensor CatchER
Authors:Zhang, Y, Weber, I.T.
Deposit date:2013-06-01
Release date:2013-12-11
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics.
Acta Crystallogr.,Sect.D, 69, 2013

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數據於2024-11-06公開中

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