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PDB: 792 results

7F1Q
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BU of 7f1q by Molmil
Cryo-EM structure of the chemokine receptor CCR5 in complex with MIP-1a and Gi
Descriptor: C-C motif chemokine 3,C-C chemokine receptor type 5, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhang, H, Chen, K, Tan, Q, Han, S, Zhu, Y, Zhao, Q, Wu, B.
Deposit date:2021-06-09
Release date:2021-07-14
Last modified:2021-07-28
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis for chemokine recognition and receptor activation of chemokine receptor CCR5.
Nat Commun, 12, 2021
6IHI
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BU of 6ihi by Molmil
Crystal structure of RasADH 3B3/I91V from Ralstonia.sp in complex with NADPH and A6O
Descriptor: (2R,3S)-2-ethyl-2-[(2E)-2-(6-methoxy-3,4-dihydro-2H-naphthalen-1-ylidene)ethyl]-3-oxidanyl-cyclopentan-1-one, Alclohol dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Zhang, H.L, Chen, X, Liu, W.D, Wu, Q.Q, Zhu, D.M.
Deposit date:2018-09-30
Release date:2019-10-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Efficient reductive desymmetrization of bulky 1,3-cyclodiketones enabled by structure-guided directed evolution of a carbonyl reductase.
Nat Catal, 2, 2019
7Y1B
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BU of 7y1b by Molmil
3.2 angstrom cryo-EM structure of extracellular region of mouse Basigin-2 in complex with the Fab fragment of antibody 6E7F1
Descriptor: Heavy chain of 6E7F1, Isoform 2 of Basigin, Light chain of 6E7F1
Authors:Zhang, H, Yang, X, Xue, Y, Huang, Y, Mo, X, Zhang, H, Li, N, Gao, N, Li, X, Wang, S, Gao, Y, Liao, J.
Deposit date:2022-06-08
Release date:2023-06-14
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Allosteric modulation of monocarboxylate transporters 1 and 4 by targeting their chaperon Basigin
To Be Published
7X32
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Crystal structure of E. coli NfsB in complex with berberine
Descriptor: BERBERINE, DIMETHYL SULFOXIDE, Dihydropteridine reductase, ...
Authors:Zhang, H, Wen, H.Y.
Deposit date:2022-02-27
Release date:2022-10-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.829 Å)
Cite:Structural basis for the transformation of the traditional medicine berberine by bacterial nitroreductase.
Acta Crystallogr D Struct Biol, 78, 2022
7W0Q
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TRIM7 in complex with C-terminal peptide of 2C
Descriptor: E3 ubiquitin-protein ligase TRIM7, peptide
Authors:Zhang, H, Liang, X, Li, X.Z.
Deposit date:2021-11-18
Release date:2022-08-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:A C-terminal glutamine recognition mechanism revealed by E3 ligase TRIM7 structures.
Nat.Chem.Biol., 18, 2022
7Y1Q
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BU of 7y1q by Molmil
5.0 angstrom cryo-EM structure of transmembrane regions of mouse Basigin/MCT1 in complex with antibody 6E7F1
Descriptor: Isoform 2 of Basigin, Monocarboxylate transporter 1
Authors:Zhang, H, Yang, X, Xue, Y, Huang, Y, Mo, X, Zhang, H, Li, N, Gao, N, Li, X, Wang, S, Gao, Y, Liao, J.
Deposit date:2022-06-08
Release date:2023-06-14
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (5.03 Å)
Cite:Allosteric modulation of monocarboxylate transporters 1 and 4 by targeting their chaperon Basigin-2
To Be Published
7X6Z
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BU of 7x6z by Molmil
TRIM7 in complex with C-terminal peptide of NSP12
Descriptor: E3 ubiquitin-protein ligase TRIM7, peptide
Authors:Zhang, H, Liang, X, Li, X.Z.
Deposit date:2022-03-08
Release date:2022-08-10
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:A C-terminal glutamine recognition mechanism revealed by E3 ligase TRIM7 structures.
Nat.Chem.Biol., 18, 2022
7X70
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TRIM7 in complex with C-terminal peptide of NSP8
Descriptor: E3 ubiquitin-protein ligase TRIM7, peptide
Authors:Zhang, H, Liang, X, Li, X.Z.
Deposit date:2022-03-08
Release date:2022-08-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:A C-terminal glutamine recognition mechanism revealed by E3 ligase TRIM7 structures.
Nat.Chem.Biol., 18, 2022
7X6Y
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BU of 7x6y by Molmil
TRIM7 in complex with C-terminal peptide of NSP5
Descriptor: E3 ubiquitin-protein ligase TRIM7, peptide
Authors:Zhang, H, Liang, X, Li, X.Z.
Deposit date:2022-03-08
Release date:2022-08-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:A C-terminal glutamine recognition mechanism revealed by E3 ligase TRIM7 structures.
Nat.Chem.Biol., 18, 2022
7VLM
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BU of 7vlm by Molmil
crystal structure of anti-CRISPR protein AcrIIA18
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, H2C7, ...
Authors:Zhang, H, Wang, X.S, Li, X.Z.
Deposit date:2021-10-04
Release date:2021-12-01
Last modified:2023-07-05
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Inhibition mechanisms of CRISPR-Cas9 by AcrIIA17 and AcrIIA18
Nucleic Acids Res., 50, 2022
7YLT
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BU of 7ylt by Molmil
Structure of a bacteria protein
Descriptor: Putative ABC transporter, substrate-binding protein
Authors:Zhang, H, Ma, Y.J, Yu, G.M, Li, X.Z.
Deposit date:2022-07-26
Release date:2023-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a bacteria protein
To Be Published
7YLS
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BU of 7yls by Molmil
Structure of a bacteria protein complex
Descriptor: ACETATE ION, Aromatic-ring-hydroxylating dioxygenase beta subunit, FE (III) ION, ...
Authors:Zhang, H, Ma, Y.J, Yu, G.M, Li, X.Z.
Deposit date:2022-07-26
Release date:2023-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of a bacteria protein complex
To Be Published
7FHQ
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BU of 7fhq by Molmil
Solution structure of the pathogenic mutant G131V of Human prion protein (91-231)
Descriptor: Major prion protein
Authors:Zhang, H, Lin, D.
Deposit date:2021-07-29
Release date:2022-07-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of the pathogenic mutant G131V of Human prion protein
To Be Published
7XVQ
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BU of 7xvq by Molmil
Crystal structure of AcrIIC4
Descriptor: Uncharacterized protein
Authors:Zhang, H, Li, X.Z, Song, G.Y.
Deposit date:2022-05-24
Release date:2023-08-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:a bacteria protein
To Be Published
7X7S
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BU of 7x7s by Molmil
Solution structure of human adenylate kinase 1 (hAK1)
Descriptor: Adenylate kinase isoenzyme 1
Authors:Zhang, H.
Deposit date:2022-03-10
Release date:2022-05-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:ADP-Induced Conformational Transition of Human Adenylate Kinase 1 Is Triggered by Suppressing Internal Motion of alpha 3 alpha 4 and alpha 7 alpha 8 Fragments on the ps-ns Timescale.
Biomolecules, 12, 2022
7EDK
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BU of 7edk by Molmil
NMR solution structure of Bt14.12, a novel A-family conotoxin from Conus betulinus
Descriptor: Conotoxin Bt14.16
Authors:Zhang, H, Lin, D, Guo, C.
Deposit date:2021-03-16
Release date:2021-03-31
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of peptide Bt14.12
To Be Published
7XB6
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BU of 7xb6 by Molmil
Crystal structure of the O-carbamoyltransferase VtdB in complex with carbamoyl adenylate intermediate
Descriptor: 5'-O-[(S)-(carbamoyloxy)(hydroxy)phosphoryl]adenosine, Carbamoyltransferase, MAGNESIUM ION
Authors:Zhang, H, Teng, Y.
Deposit date:2022-03-20
Release date:2023-03-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Crystal structure of O-carbamoyltransferase VtdB from Streptomyces sp. NO1W98 in complex with carbamoyladenylate
To Be Published
7YLR
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BU of 7ylr by Molmil
Structure of a bacteria protein
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, Ferredoxin
Authors:Zhang, H, Ma, Y.J, Yu, G.M, Li, X.Z.
Deposit date:2022-07-26
Release date:2023-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structure of a bacteria protein
To Be Published
7XVO
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BU of 7xvo by Molmil
a bacteria protein complex
Descriptor: CRISPR-associated endonuclease Cas9, Uncharacterized protein
Authors:Zhang, H, Li, X.Z, Song, G.Y.
Deposit date:2022-05-24
Release date:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:a bacteria protein
To Be Published
1VYV
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BU of 1vyv by Molmil
beta4 subunit of Ca2+ channel
Descriptor: CALCIUM CHANNEL BETA-4SUBUNIT
Authors:Chen, Y.-H, Li, M.-H, Zhang, Y, He, L.-L, Yamada, Y, Fitzmaurice, A, Yang, S, Zhang, H, Liang, T, Yang, J.
Deposit date:2004-05-07
Release date:2004-06-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis of the Alpha(1)-Beta Subunit Interaction of Voltage-Gated Ca(2+) Channels
Nature, 429, 2004
1VYT
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BU of 1vyt by Molmil
beta3 subunit complexed with aid
Descriptor: CALCIUM CHANNEL BETA-3 SUBUNIT, VOLTAGE-DEPENDENT L-TYPE CALCIUM CHANNEL ALPHA-1C SUBUNIT
Authors:Chen, Y.-H, Li, M.-H, Zhang, Y, He, L.-L, Yamada, Y, Fitzmaurice, A, Yang, S, Zhang, H, Tong, L, Yang, J.
Deposit date:2004-05-07
Release date:2004-06-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis of the Alpha(1)-Beta Subunit Interaction of Voltage-Gated Ca(2+) Channels
Nature, 429, 2004
1VQB
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BU of 1vqb by Molmil
GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN)
Descriptor: GENE V PROTEIN
Authors:Skinner, M.M, Zhang, H, Leschnitzer, D.H, Guan, Y, Bellamy, H, Sweet, R.M, Gray, C.W, Konings, R.N.H, Wang, A.H.-J, Terwilliger, T.C.
Deposit date:1996-08-14
Release date:1997-02-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the gene V protein of bacteriophage f1 determined by multiwavelength x-ray diffraction on the selenomethionyl protein.
Proc.Natl.Acad.Sci.USA, 91, 1994
3LNL
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BU of 3lnl by Molmil
Crystal structure of Staphylococcus aureus protein SA1388
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, UPF0135 protein SA1388, ZINC ION
Authors:Singh, K.S, Chruszcz, M, Zhang, X, Minor, W, Zhang, H.
Deposit date:2010-02-02
Release date:2010-03-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a Conserved Hypothetical Protein Sa1388 from S. aureus Reveals a Capped Hexameric Toroid with Two Pii Domain Lids and a Dinuclear Metal Center.
Bmc Struct.Biol., 6, 2006
2R5W
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BU of 2r5w by Molmil
Crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase from Francisella tularensis
Descriptor: CHLORIDE ION, MAGNESIUM ION, Nicotinamide-nucleotide adenylyltransferase
Authors:Huang, N, Sorci, L, Zhang, X, Brautigan, C, Li, X, Raffaelli, N, Grishin, N, Osterman, A, Zhang, H.
Deposit date:2007-09-04
Release date:2008-03-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Bifunctional NMN Adenylyltransferase/ADP-Ribose Pyrophosphatase: Structure and Function in Bacterial NAD Metabolism.
Structure, 16, 2008
1W5Y
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BU of 1w5y by Molmil
HIV-1 protease in complex with fluoro substituted diol-based C2- symmetric inhibitor
Descriptor: (2R,3R,4R,5R)-2,5-BIS[(2,5-DIFLUOROBENZYL)OXY]-3,4-DIHYDROXY-N,N'-BIS[(1S,2R)-2-HYDROXY-2,3-DIHYDRO-1H-INDEN-1-YL]HEXANEDIAMIDE, POL POLYPROTEIN
Authors:Lindberg, J, Pyring, D, Loewgren, S, Rosenquist, A, Zuccarello, G, Kvarnstroem, I, Zhang, H, Vrang, L, Claesson, B, Hallberg, A, Samuelsson, B, Unge, T.
Deposit date:2004-08-10
Release date:2004-10-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Symmetric Fluoro-Substituted Diol-Based HIV Protease Inhibitors. Ortho-Fluorinated and Meta-Fluorinated P1/P1'-Benzyloxy Side Groups Significantly Improve the Antiviral Activity and Preserve Binding Efficacy
Eur.J.Biochem., 271, 2004

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