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PDB: 257 件

4LNO
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BU of 4lno by Molmil
B. subtilis glutamine synthetase structures reveal large active site conformational changes and basis for isoenzyme specific regulation: form two of GS-1
分子名称: GLUTAMINE, Glutamine synthetase, MAGNESIUM ION
著者Schumacher, M.A, Chinnam, N, Tonthat, N, Fisher, S, Wray, L.
登録日2013-07-11
公開日2013-11-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of the Bacillus subtilis Glutamine Synthetase Dodecamer Reveal Large Intersubunit Catalytic Conformational Changes Linked to a Unique Feedback Inhibition Mechanism.
J.Biol.Chem., 288, 2013
3BTC
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BU of 3btc by Molmil
crystal structure of QacR(E57Q) bound to malachite green
分子名称: HTH-type transcriptional regulator qacR, MALACHITE GREEN, SULFATE ION
著者Schumacher, M.A, Schuman, J.T, Brennan, R.G.
登録日2007-12-28
公開日2008-08-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization
Biochemistry, 47, 2008
3BTJ
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BU of 3btj by Molmil
crystal structure of QacR(E58Q) bound to dequalinium
分子名称: DEQUALINIUM, HTH-type transcriptional regulator qacR, SULFATE ION
著者Schumacher, M.A, Schuman, J.T, Brennan, R.G.
登録日2007-12-28
公開日2008-08-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization
Biochemistry, 47, 2008
4LSD
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BU of 4lsd by Molmil
Myokine structure
分子名称: Fibronectin type III domain-containing protein 5
著者Schumacher, M.A, Ohashi, T, Shah, R.S, Chinnam, N, Erickson, H.
登録日2013-07-22
公開日2013-10-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献The structure of irisin reveals a novel intersubunit beta-sheet fibronectin type III (FNIII) dimer: implications for receptor activation.
J.Biol.Chem., 288, 2013
4E07
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BU of 4e07 by Molmil
ParF-AMPPCP-C2221 form
分子名称: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Plasmid partitioning protein ParF
著者Schumacher, M.A, Ye, Q, Barge, M.R, Barilla, D, Hayes, F.
登録日2012-03-02
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural Mechanism of ATP-induced Polymerization of the Partition Factor ParF: IMPLICATIONS FOR DNA SEGREGATION.
J.Biol.Chem., 287, 2012
3KZ5
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BU of 3kz5 by Molmil
Structure of cdomain
分子名称: ACETATE ION, Protein sopB
著者Schumacher, M.A.
登録日2009-12-07
公開日2010-03-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes.
Nucleic Acids Res., 38, 2010
4GCT
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BU of 4gct by Molmil
structure of No factor protein-DNA complex
分子名称: DNA (5'-D(*TP*TP*AP*CP*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*CP*GP*TP*AP*A)-3'), Nucleoid occlusion factor SlmA
著者Schumacher, M.A.
登録日2012-07-30
公開日2013-06-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献SlmA forms a higher-order structure on DNA that inhibits cytokinetic Z-ring formation over the nucleoid.
Proc.Natl.Acad.Sci.USA, 110, 2013
4GCL
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BU of 4gcl by Molmil
structure of no-dna factor
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*AP*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*CP*T)-3'), Nucleoid occlusion factor SlmA
著者Schumacher, M.A.
登録日2012-07-30
公開日2013-06-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献SlmA forms a higher-order structure on DNA that inhibits cytokinetic Z-ring formation over the nucleoid.
Proc.Natl.Acad.Sci.USA, 110, 2013
4GCK
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BU of 4gck by Molmil
structure of no-dna complex
分子名称: DNA (5'-D(*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*C)-3'), Nucleoid occlusion factor SlmA
著者Schumacher, M.A.
登録日2012-07-30
公開日2013-06-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献SlmA forms a higher-order structure on DNA that inhibits cytokinetic Z-ring formation over the nucleoid.
Proc.Natl.Acad.Sci.USA, 110, 2013
4GFL
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BU of 4gfl by Molmil
NO mechanism, slma
分子名称: Nucleoid occlusion factor SlmA
著者Schumacher, M.A.
登録日2012-08-03
公開日2013-06-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献SlmA forms a higher-order structure on DNA that inhibits cytokinetic Z-ring formation over the nucleoid.
Proc.Natl.Acad.Sci.USA, 110, 2013
4DZZ
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BU of 4dzz by Molmil
Structure of ParF-ADP, crystal form 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Plasmid partitioning protein ParF
著者Schumacher, M.A, Ye, Q, Barge, M.R, Barilla, D, Hayes, F.
登録日2012-03-01
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Mechanism of ATP-induced Polymerization of the Partition Factor ParF: IMPLICATIONS FOR DNA SEGREGATION.
J.Biol.Chem., 287, 2012
4E09
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BU of 4e09 by Molmil
Structure of ParF-AMPPCP, I422 form
分子名称: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Plasmid partitioning protein ParF, SULFATE ION
著者Schumacher, M.A, Ye, Q, Barge, M.R, Barilla, D, Hayes, F.
登録日2012-03-02
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Structural Mechanism of ATP-induced Polymerization of the Partition Factor ParF: IMPLICATIONS FOR DNA SEGREGATION.
J.Biol.Chem., 287, 2012
4E03
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BU of 4e03 by Molmil
Structure of ParF-ADP form 2
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Plasmid partitioning protein ParF
著者Schumacher, M.A, Ye, Q, Barge, M.R, Barilla, D, Hayes, F.
登録日2012-03-02
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural Mechanism of ATP-induced Polymerization of the Partition Factor ParF: IMPLICATIONS FOR DNA SEGREGATION.
J.Biol.Chem., 287, 2012
4GFK
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BU of 4gfk by Molmil
structures of NO factors
分子名称: Nucleoid occlusion factor SlmA
著者Schumacher, M.A.
登録日2012-08-03
公開日2013-06-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献SlmA forms a higher-order structure on DNA that inhibits cytokinetic Z-ring formation over the nucleoid.
Proc.Natl.Acad.Sci.USA, 110, 2013
3MKY
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BU of 3mky by Molmil
Structure of SopB(155-323)-18mer DNA complex, I23 form
分子名称: DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3'), Protein sopB, SULFATE ION
著者Schumacher, M.A, Piro, K, Xu, W.
登録日2010-04-15
公開日2010-05-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes.
Nucleic Acids Res., 38, 2010
4FE4
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BU of 4fe4 by Molmil
Crystal structure of apo E. coli XylR
分子名称: Xylose operon regulatory protein
著者Schumacher, M.A, Ni, L.
登録日2012-05-29
公開日2012-12-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Structures of the Escherichia coli transcription activator and regulator of diauxie, XylR: an AraC DNA-binding family member with a LacI/GalR ligand-binding domain.
Nucleic Acids Res., 41, 2013
3MKW
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BU of 3mkw by Molmil
Structure of sopB(155-272)-18mer complex, I23 form
分子名称: DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3'), Protein sopB, SULFATE ION
著者Schumacher, M.A, Piro, K, Xu, W.
登録日2010-04-15
公開日2010-05-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes.
Nucleic Acids Res., 38, 2010
3M9A
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BU of 3m9a by Molmil
Protein structure of type III plasmid segregation TubR
分子名称: Putative DNA-binding protein
著者Schumacher, M.A, Ni, L.
登録日2010-03-21
公開日2010-07-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献From the Cover: Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition.
Proc.Natl.Acad.Sci.USA, 107, 2010
3MKZ
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BU of 3mkz by Molmil
Structure of SopB(155-272)-18mer complex, P21 form
分子名称: CALCIUM ION, DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3'), Protein sopB
著者Schumacher, M.A.
登録日2010-04-15
公開日2010-05-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes.
Nucleic Acids Res., 38, 2010
3M8F
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BU of 3m8f by Molmil
Protein structure of type III plasmid segregation TubR mutant
分子名称: Putative DNA-binding protein
著者Schumacher, M.A, Ni, L.
登録日2010-03-17
公開日2010-07-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献From the Cover: Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition.
Proc.Natl.Acad.Sci.USA, 107, 2010
3M8K
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BU of 3m8k by Molmil
Protein structure of type III plasmid segregation TubZ
分子名称: FtsZ/tubulin-related protein
著者Schumacher, M.A, Ni, L.
登録日2010-03-18
公開日2010-07-07
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献From the Cover: Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition.
Proc.Natl.Acad.Sci.USA, 107, 2010
5U1J
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BU of 5u1j by Molmil
Structure of pNOB8 ParA bound to nonspecific DNA
分子名称: DNA (5'-D(*CP*GP*TP*GP*TP*AP*AP*TP*GP*AP*CP*GP*CP*CP*GP*GP*CP*GP*TP*CP*A)-3'), DNA (5'-D(*TP*GP*AP*CP*GP*CP*CP*GP*GP*CP*GP*TP*CP*AP*TP*GP*AP*CP*AP*CP*G)-3'), PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Schumacher, M.A.
登録日2016-11-28
公開日2017-04-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structures of partition protein ParA with nonspecific DNA and ParB effector reveal molecular insights into principles governing Walker-box DNA segregation.
Genes Dev., 31, 2017
5TZG
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BU of 5tzg by Molmil
Structure of the BldD CTD(D116A)-(c-di-GMP)2, form 2
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), DNA-binding protein, ZINC ION
著者Schumacher, M.A.
登録日2016-11-21
公開日2017-04-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Streptomyces master regulator BldD binds c-di-GMP sequentially to create a functional BldD2-(c-di-GMP)4 complex.
Nucleic Acids Res., 45, 2017
5HBU
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BU of 5hbu by Molmil
Structure of the E. coli nucleoid occlusion protein SlmA bound to DNA and the C-terminal tail of the cytoskeletal cell division protein FtsZ
分子名称: DNA (5'-D(*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*C)-3'), FtsZ CTT peptide, Nucleoid occlusion factor SlmA
著者Schumacher, M.A, Zeng, W.
登録日2016-01-02
公開日2016-04-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of the nucleoid occlusion protein SlmA bound to DNA and the C-terminal domain of the cytoskeletal protein FtsZ.
Proc.Natl.Acad.Sci.USA, 113, 2016
3VEA
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BU of 3vea by Molmil
Crystal Structure of matP-matS23mer
分子名称: 5'-D(*AP*GP*TP*TP*CP*GP*TP*GP*AP*CP*AP*AP*TP*GP*TP*CP*AP*CP*GP*AP*AP*CP*T)-3', 5'-D(*AP*GP*TP*TP*CP*GP*TP*GP*AP*CP*AP*TP*TP*GP*TP*CP*AP*CP*GP*AP*AP*CP*T)-3', Macrodomain Ter protein
著者Schumacher, M.A.
登録日2012-01-07
公開日2012-11-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Molecular basis for a protein-mediated DNA-bridging mechanism that functions in condensation of the E. coli chromosome.
Mol.Cell, 48, 2012

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件を2024-08-28に公開中

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