Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 889 results

2WR1
DownloadVisualize
BU of 2wr1 by Molmil
structure of influenza H2 hemagglutinin with human receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HEMAGGLUTININ, ...
Authors:Liu, J, Stevens, D.J, Haire, L.F, Walker, P.A, Coombs, P.J, Russell, R.J, Gamblin, S.J, Skehel, J.J.
Deposit date:2009-08-29
Release date:2009-09-29
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:From the Cover: Structures of Receptor Complexes Formed by Hemagglutinins from the Asian Influenza Pandemic of 1957.
Proc.Natl.Acad.Sci.USA, 106, 2009
2WRB
DownloadVisualize
BU of 2wrb by Molmil
the structure of influenza H2 human singapore hemagglutinin with avian receptor
Descriptor: HEMAGGLUTININ, N-acetyl-alpha-neuraminic acid
Authors:Liu, J, Stevens, D.J, Haire, L.F, Walker, P.A, Coombs, P.J, Russell, R.J, Gamblin, S.J, Skehel, J.J.
Deposit date:2009-09-01
Release date:2009-09-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:From the Cover: Structures of Receptor Complexes Formed by Hemagglutinins from the Asian Influenza Pandemic of 1957.
Proc.Natl.Acad.Sci.USA, 106, 2009
2WR5
DownloadVisualize
BU of 2wr5 by Molmil
structure of influenza H2 duck Ontario hemagglutinin
Descriptor: HEMAGGLUTININ
Authors:Liu, J, Stevens, D.J, Haire, L.F, Walker, P.A, Coombs, P.J, Russell, R.J, Gamblin, S.J, Skehel, J.J.
Deposit date:2009-08-29
Release date:2009-09-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:From the Cover: Structures of Receptor Complexes Formed by Hemagglutinins from the Asian Influenza Pandemic of 1957.
Proc.Natl.Acad.Sci.USA, 106, 2009
1OY5
DownloadVisualize
BU of 1oy5 by Molmil
Crystal structure of tRNA (m1G37) methyltransferase from Aquifex aeolicus
Descriptor: tRNA (Guanine-N(1)-)-methyltransferase
Authors:Liu, J, Wang, W, Shin, D.H, Yokota, H, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2003-04-03
Release date:2003-11-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of tRNA (m1G37) methyltransferase from Aquifex aeolicus at 2.6 A resolution: a novel methyltransferase fold.
Proteins, 53, 2003
7E35
DownloadVisualize
BU of 7e35 by Molmil
Crystal structure of the SARS-CoV-2 papain-like protease (PLPro) C112S mutant bound to compound S43
Descriptor: N-[(3-acetamidophenyl)methyl]-1-[(1R)-1-naphthalen-1-ylethyl]piperidine-4-carboxamide, Non-structural protein 3, ZINC ION
Authors:Liu, J, Wang, Y, Xu, X, Pan, L.
Deposit date:2021-02-08
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Development of potent and selective inhibitors targeting the papain-like protease of SARS-CoV-2.
Cell Chem Biol, 28, 2021
7D65
DownloadVisualize
BU of 7d65 by Molmil
Cryo-EM Structure of human CALHM5 in the presence of Ca2+
Descriptor: 1,2-DIOCTANOYL-SN-GLYCERO-3-PHOSPHATE, Calcium homeostasis modulator protein 5
Authors:Liu, J, Guan, F.H, Wu, J, Wan, F.T, Lei, M, Ye, S.
Deposit date:2020-09-29
Release date:2020-12-23
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Cryo-EM structures of human calcium homeostasis modulator 5.
Cell Discov, 6, 2020
7D61
DownloadVisualize
BU of 7d61 by Molmil
Cryo-EM Structure of human CALHM5 in the presence of EDTA
Descriptor: 1,2-DIOCTANOYL-SN-GLYCERO-3-PHOSPHATE, Calcium homeostasis modulator protein 5
Authors:Liu, J, Guan, F.H, Wu, J, Wan, F.T, Lei, M, Ye, S.
Deposit date:2020-09-28
Release date:2020-12-23
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures of human calcium homeostasis modulator 5.
Cell Discov, 6, 2020
7D6H
DownloadVisualize
BU of 7d6h by Molmil
Crystal structure of the SARS-CoV-2 papain-like protease (PLPro) C112S mutant
Descriptor: PHOSPHATE ION, Papain-like protease, ZINC ION
Authors:Liu, J, Wang, Y, Pan, L.
Deposit date:2020-09-30
Release date:2020-11-04
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Development of potent and selective inhibitors targeting the papain-like protease of SARS-CoV-2.
Cell Chem Biol, 28, 2021
5F1I
DownloadVisualize
BU of 5f1i by Molmil
MHC with 9-mer peptide
Descriptor: 9-mer peptide, Beta2M, MHC class I DLA-88
Authors:Liu, J, Chai, Y, QI, J, Gao, G.F.
Deposit date:2015-11-30
Release date:2016-11-30
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.904 Å)
Cite:Diversified Anchoring Features the Peptide Presentation of DLA-88*50801: First Structural Insight into Domestic Dog MHC Class I
J Immunol., 197, 2016
3EQP
DownloadVisualize
BU of 3eqp by Molmil
Crystal Structure of Ack1 with compound T95
Descriptor: Activated CDC42 kinase 1, CHLORIDE ION, N-(2,6-dimethylphenyl)-4-(2-ethoxyphenoxy)-2-({4-[4-(2-hydroxyethyl)piperazin-1-yl]phenyl}amino)pyrimidine-5-carboxamide
Authors:Liu, J, Wang, Z, Walker, N.P.C.
Deposit date:2008-10-01
Release date:2008-12-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Identification and optimization of N3,N6-diaryl-1H-pyrazolo[3,4-d]pyrimidine-3,6-diamines as a novel class of ACK1 inhibitors.
Bioorg.Med.Chem.Lett., 18, 2008
5F1N
DownloadVisualize
BU of 5f1n by Molmil
MHC complexed to 11mer peptide
Descriptor: Beta-2-microglobulin, MHC class I antigen, Peptide from Cytochrome P450 family 1 subfamily B polypeptide 1
Authors:Liu, J, Chai, Y, Qi, J, Gao, G.F.
Deposit date:2015-11-30
Release date:2016-11-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Diversified Anchoring Features the Peptide Presentation of DLA-88*50801: First Structural Insight into Domestic Dog MHC Class I
J Immunol., 197, 2016
6U3T
DownloadVisualize
BU of 6u3t by Molmil
Structure-based discovery of a novel small-molecule inhibitor of methicillin-resistant S. aureus
Descriptor: Alpha-hemolysin, SULFATE ION, fos-choline-14
Authors:Liu, J, Kozhaya, L, Torres, V.J, Unutmaz, D, Lu, M.
Deposit date:2019-08-22
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structure-based discovery of a small-molecule inhibitor of methicillin-resistantStaphylococcus aureusvirulence.
J.Biol.Chem., 295, 2020
6U4P
DownloadVisualize
BU of 6u4p by Molmil
Structure-based discovery of a novel small-molecule inhibitor of methicillin-resistant S. aureus
Descriptor: Alpha-hemolysin, SULFATE ION, fos-choline-14
Authors:Liu, J, Kozhaya, L, Torres, V.J, Unutmaz, D, Lu, M.
Deposit date:2019-08-26
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structure-based discovery of a small-molecule inhibitor of methicillin-resistantStaphylococcus aureusvirulence.
J.Biol.Chem., 295, 2020
4DFH
DownloadVisualize
BU of 4dfh by Molmil
Crystal structure of cell adhesion molecule nectin-2/CD112 variable domain
Descriptor: Poliovirus receptor-related protein 2
Authors:Liu, J, Qian, X, Chen, Z, Xu, X, Gao, F, Zhang, S, Zhang, R, Qi, J, Gao, G.F, Yan, J.
Deposit date:2012-01-23
Release date:2012-06-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of Cell Adhesion Molecule Nectin-2/CD112 and Its Binding to Immune Receptor DNAM-1/CD226
J.Immunol., 188, 2012
6U49
DownloadVisualize
BU of 6u49 by Molmil
Structure-based discovery of a novel small-molecule inhibitor of methicillin-resistant S. aureus
Descriptor: Alpha-hemolysin, SULFATE ION, fos-choline-14
Authors:Liu, J, Kozhaya, L, Torres, V.J, Unutmaz, D, Lu, M.
Deposit date:2019-08-23
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure-based discovery of a small-molecule inhibitor of methicillin-resistantStaphylococcus aureusvirulence.
J.Biol.Chem., 295, 2020
6U3Y
DownloadVisualize
BU of 6u3y by Molmil
Structure-based discovery of a novel small-molecule inhibitor of methicillin-resistant S. aureus
Descriptor: ACETATE ION, Gamma-hemolysin subunit A, Panton-Valentine Leucocidin F, ...
Authors:Liu, J, Kozhaya, L, Torres, V.J, Unutmaz, D, Lu, M.
Deposit date:2019-08-22
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structure-based discovery of a small-molecule inhibitor of methicillin-resistantStaphylococcus aureusvirulence.
J.Biol.Chem., 295, 2020
8E7X
DownloadVisualize
BU of 8e7x by Molmil
RsTSPO A138F with one Heme bound
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, PROTOPORPHYRIN IX CONTAINING FE, Tryptophan-rich sensory protein
Authors:Liu, J, Hiser, C, Li, F, Garavito, R, Ferguson-Miller, S.
Deposit date:2022-08-25
Release date:2023-03-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:New TSPO Crystal Structures of Mutant and Heme-Bound Forms with Altered Flexibility, Ligand Binding, and Porphyrin Degradation Activity.
Biochemistry, 62, 2023
8E7Z
DownloadVisualize
BU of 8e7z by Molmil
RsTSPO mutant -A138F
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, DI(HYDROXYETHYL)ETHER, Tryptophan-rich sensory protein
Authors:Liu, J, Hiser, C, Li, F, Garavito, R, Ferguson-Miller, S.
Deposit date:2022-08-25
Release date:2023-03-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:New TSPO Crystal Structures of Mutant and Heme-Bound Forms with Altered Flexibility, Ligand Binding, and Porphyrin Degradation Activity.
Biochemistry, 62, 2023
6U2S
DownloadVisualize
BU of 6u2s by Molmil
Structure-based discovery of a novel small-molecule inhibitor of methicillin-resistant S. aureus
Descriptor: Bi-component leukocidin LukED subunit D, fos-choline-14
Authors:Liu, J, Kozhaya, L, Torres, V.J, Unutmaz, D, Lu, M.
Deposit date:2019-08-20
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-based discovery of a small-molecule inhibitor of methicillin-resistantStaphylococcus aureusvirulence.
J.Biol.Chem., 295, 2020
6U33
DownloadVisualize
BU of 6u33 by Molmil
Structure-based discovery of a novel small-molecule inhibitor of methicillin-resistant S. aureus
Descriptor: Bi-component leukocidin LukED subunit D, NICKEL (II) ION
Authors:Liu, J, Kozhaya, L, Torres, V.J, Unutmaz, D, Lu, M.
Deposit date:2019-08-21
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure-based discovery of a small-molecule inhibitor of methicillin-resistantStaphylococcus aureusvirulence.
J.Biol.Chem., 295, 2020
6U3F
DownloadVisualize
BU of 6u3f by Molmil
Structure-based discovery of a novel small-molecule inhibitor of methicillin-resistant S. aureus
Descriptor: Panton-Valentine Leucocidin F, SULFATE ION, fos-choline-14
Authors:Liu, J, Kozhaya, L, Torres, V.J, Unutmaz, D, Lu, M.
Deposit date:2019-08-21
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure-based discovery of a small-molecule inhibitor of methicillin-resistantStaphylococcus aureusvirulence.
J.Biol.Chem., 295, 2020
2YPG
DownloadVisualize
BU of 2ypg by Molmil
Haemagglutinin of 1968 Human H3N2 Virus in Complex with Human Receptor Analogue LSTc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Liu, J, Xiong, X, Haire, L.F, Lin, Y.P, Wharton, S.A, Martin, S.R, Coombs, P.J, Vachieri, S.G, Christodoulou, E, Walker, P.A, Skehel, J.J, Gamblin, S.J, Hay, A.J, Daniels, R.S, McCauley, J.W.
Deposit date:2012-10-30
Release date:2012-11-07
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Evolution of the Receptor Binding Properties of the Influenza A(H3N2) Hemagglutinin.
Proc.Natl.Acad.Sci.USA, 109, 2012
6V51
DownloadVisualize
BU of 6v51 by Molmil
Spin-labeled T4 Lysozyme (9/131FnbY)-(4-Amino-TEMPO)
Descriptor: 4-amino-2,2,6,6-tetramethylpiperidin-1-ol, Endolysin
Authors:Liu, J, Morizumi, T, Ou, W.L, Wang, L, Ernst, O.P.
Deposit date:2019-12-02
Release date:2020-10-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Genetically Encoded Quinone Methides Enabling Rapid, Site-Specific, and Photocontrolled Protein Modification with Amine Reagents.
J.Am.Chem.Soc., 142, 2020
3G9R
DownloadVisualize
BU of 3g9r by Molmil
Structure of the HIV-1 gp41 Membrane-Proximal Ectodomain Region in a Putative Prefusion Conformation
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Fusion complex of HIV-1 Envelope glycoprotein and Saccharomyces cerevisiae General control protein GCN4, PHOSPHATE ION
Authors:Liu, J, Lu, M.
Deposit date:2009-02-13
Release date:2009-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the HIV-1 gp41 Membrane-Proximal Ectodomain Region in a Putative Prefusion Conformation.
Biochemistry, 48, 2009
3EQR
DownloadVisualize
BU of 3eqr by Molmil
Crystal Structure of Ack1 with compound T74
Descriptor: Activated CDC42 kinase 1, CHLORIDE ION, N~3~-(2,6-dimethylphenyl)-1-(3-methoxy-3-methylbutyl)-N~6~-(4-piperazin-1-ylphenyl)-1H-pyrazolo[3,4-d]pyrimidine-3,6-diamine
Authors:Liu, J, Wang, Z, Walker, N.P.C.
Deposit date:2008-10-01
Release date:2008-12-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification and optimization of N3,N6-diaryl-1H-pyrazolo[3,4-d]pyrimidine-3,6-diamines as a novel class of ACK1 inhibitors.
Bioorg.Med.Chem.Lett., 18, 2008

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon