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PDB: 1131 件

1T8U
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Crystal Structure of human 3-O-Sulfotransferase-3 with bound PAP and tetrasaccharide substrate
分子名称: 4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, ADENOSINE-3'-5'-DIPHOSPHATE, SODIUM ION, ...
著者Moon, A.F, Edavettal, S.C, Krahn, J.M, Munoz, E.M, Negishi, M, Linhardt, R.J, Liu, J, Pedersen, L.C.
登録日2004-05-13
公開日2004-08-31
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural analysis of the sulfotransferase (3-o-sulfotransferase isoform 3) involved in the biosynthesis of an entry receptor for herpes simplex virus 1
J.Biol.Chem., 279, 2004
1HUO
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CRYSTAL STRUCTURE OF DNA POLYMERASE BETA COMPLEXED WITH DNA AND CR-TMPPCP
分子名称: 5'-D(*AP*AP*TP*AP*GP*GP*CP*GP*TP*CP*G)-3', 5'-D(P*CP*GP*AP*CP*GP*CP*C)-3', CHROMIUM ION, ...
著者Arndt, J.W, Gong, W, Zhong, X, Showalter, A.K, Liu, J, Lin, Z, Paxson, C, Tsai, M.-D, Chan, M.K.
登録日2001-01-04
公開日2001-04-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Insight into the catalytic mechanism of DNA polymerase beta: structures of intermediate complexes.
Biochemistry, 40, 2001
5WWU
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Crystal Structure of HLA-A*2402 in complex with 2009 pandemic influenza A(H1N1) virus and avian influenza A(H5N1) virus-derived peptide H1-25
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-24 alpha chain, ...
著者Zhao, M, Liu, K, Chai, Y, Qi, J, Liu, J, Gao, G.F.
登録日2017-01-05
公開日2018-01-17
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.794 Å)
主引用文献Heterosubtypic Protections against Human-Infecting Avian Influenza Viruses Correlate to Biased Cross-T-Cell Responses.
Mbio, 9, 2018
1T8T
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Crystal Structure of human 3-O-Sulfotransferase-3 with bound PAP
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, CITRIC ACID, heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3A1
著者Moon, A.F, Edavettal, S.C, Krahn, J.M, Munoz, E.M, Negishi, M, Linhardt, R.J, Liu, J, Pedersen, L.C.
登録日2004-05-13
公開日2004-08-31
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural analysis of the sulfotransferase (3-o-sulfotransferase isoform 3) involved in the biosynthesis of an entry receptor for herpes simplex virus 1
J.Biol.Chem., 279, 2004
1TU4
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Crystal Structure of Rab5-GDP Complex
分子名称: COBALT (II) ION, GUANOSINE-5'-DIPHOSPHATE, Ras-related protein Rab-5A, ...
著者Zhu, G, Zhai, P, Liu, J, Terzyan, S, Li, G, Zhang, X.C.
登録日2004-06-24
公開日2004-10-05
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of Rab5-Rabaptin5 interaction in endocytosis
Nat.Struct.Mol.Biol., 11, 2004
1TQE
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Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
分子名称: Histone deacetylase 9, MEF2 binding site of nur77 promoter, Myocyte-specific enhancer factor 2B
著者Chen, L, Han, A, He, J, Wu, Y, Liu, J.O.
登録日2004-06-17
公開日2004-12-21
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Mechanism of Recruitment of Class II Histone Deacetylases by Myocyte Enhancer Factor-2.
J.Mol.Biol., 345, 2005
1HUZ
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CRYSTAL STRUCTURE OF DNA POLYMERASE COMPLEXED WITH DNA AND CR-PCP
分子名称: 5'-D(*AP*AP*TP*AP*GP*GP*CP*GP*TP*CP*G)-3', 5'-D(P*CP*GP*AP*CP*GP*CP*CP*T)-3', CHROMIUM ION, ...
著者Arndt, J.W, Gong, W, Zhong, X, Showalter, A.K, Liu, J, Lin, Z, Paxson, C, Tsai, M.-D, Chan, M.K.
登録日2001-01-04
公開日2001-04-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Insight into the catalytic mechanism of DNA polymerase beta: structures of intermediate complexes.
Biochemistry, 40, 2001
1T0P
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Structural Basis of ICAM recognition by integrin alpahLbeta2 revealed in the complex structure of binding domains of ICAM-3 and alphaLbeta2 at 1.65 A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Integrin alpha-L, Intercellular adhesion molecule-3, ...
著者Song, G, Yang, Y.T, Liu, J.H, Shimaoko, M, Springer, T.A, Wang, J.H.
登録日2004-04-12
公開日2005-03-08
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献An atomic resolution view of ICAM recognition in a complex between the binding domains of ICAM-3 and integrin alphaLbeta2.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1EQ7
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CORE STRUCTURE OF THE OUTER MEMBRANE LIPOPROTEIN FROM ESCHERICHIA COLI AT 1.9 ANGSTROM RESOLUTION
分子名称: OUTER MEMBRANE LIPOPROTEIN
著者Shu, W, Liu, J, Ji, H, Lu, M.
登録日2000-04-03
公開日2000-06-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Core structure of the outer membrane lipoprotein from Escherichia coli at 1.9 A resolution.
J.Mol.Biol., 299, 2000
1WBY
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CRYSTAL STRUCTURES OF MURINE MHC CLASS I H-2 Db AND Kb MOLECULES IN COMPLEX WITH CTL EPITOPES FROM INFLUENZA A VIRUS: IMPLICATIONS FOR TCR REPERTOIRE SELECTION AND IMMUNODOMINANCE
分子名称: BETA-2MICROGLOBULIN, H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B ALPHA CHAIN, ...
著者Meijers, R, Lai, C, Yang, Y, Liu, J, Zhong, W, Wang, J, Reinherz, E.L.
登録日2004-11-05
公開日2005-01-19
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structures of Murine Mhc Class I H-2 D(B) and K(B) Molecules in Complex with Ctl Epitopes from Influenza a Virus: Implications for Tcr Repertoire Selection and Immunodominance
J.Mol.Biol., 345, 2005
1IG3
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Mouse Thiamin Pyrophosphokinase Complexed with Thiamin
分子名称: 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM, SULFATE ION, thiamin pyrophosphokinase
著者Timm, D.E, Liu, J, Baker, L.-J, Harris, R.A.
登録日2001-04-16
公開日2001-04-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of thiamin pyrophosphokinase.
J.Mol.Biol., 310, 2001
7LH9
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Crystal structure of BRPF2 PWWP domain in complex with DNA
分子名称: Bromodomain-containing protein 1, DNA
著者Zhang, M, Lei, M, Qin, S, Dong, A, Yang, A, Li, Y, Loppnau, P, Hughes, T.R, Arrowsmith, C.H, Edwards, A.M, Min, J, Liu, J, Structural Genomics Consortium (SGC)
登録日2021-01-21
公開日2021-02-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the BRPF2 PWWP domain in complex with DNA reveals a different binding mode than the HDGF family of PWWP domains.
Biochim Biophys Acta Gene Regul Mech, 1864, 2021
6DRZ
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Structural Determinants of Activation and Biased Agonism at the 5-HT2B Receptor
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (8alpha)-N-[(2S)-1-hydroxybutan-2-yl]-1,6-dimethyl-9,10-didehydroergoline-8-carboxamide, 5HT2B receptor, ...
著者McCorvy, J.D, Wacker, D, Wang, S, Agegnehu, B, Liu, J, Lansu, K, Tribo, A.R, Olsen, R.H.J, Che, T, Jin, J, Roth, B.L.
登録日2018-06-13
公開日2018-08-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.102 Å)
主引用文献Structural determinants of 5-HT2Breceptor activation and biased agonism.
Nat. Struct. Mol. Biol., 25, 2018
6DRY
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Structural Determinants of Activation and Biased Agonism at the 5-HT2B Receptor
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (8beta)-N-[(2S)-1-hydroxybutan-2-yl]-6-methyl-9,10-didehydroergoline-8-carboxamide, 5HT2B receptor, ...
著者McCorvy, J.D, Wacker, D, Wang, S, Agegnehu, B, Liu, J, Lansu, K, Tribo, A.R, Olsen, R.H.J, Che, T, Jin, J, Roth, B.L.
登録日2018-06-13
公開日2018-08-29
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.918 Å)
主引用文献Structural determinants of 5-HT2Breceptor activation and biased agonism.
Nat. Struct. Mol. Biol., 25, 2018
1RZW
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The Solution Structure of the Archaeglobus fulgidis protein AF2095. Northeast Structural Genomics Consortium target GR4
分子名称: Protein AF2095(GR4)
著者Powers, R, Acton, T.B, Huang, Y.J, Liu, J, Ma, L, Rost, B, Chiang, Y, Cort, J.R, Kennedy, M.A, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2003-12-29
公開日2004-11-16
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of Archaeglobus fulgidis peptidyl-tRNA hydrolase (Pth2) provides evidence for an extensive conserved family of Pth2 enzymes in archea, bacteria, and eukaryotes
Protein Sci., 14, 2005
7NIH
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Wzc-K540M MgADP C8
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Putative transmembrane protein Wzc
著者Naismith, J.H, Liu, J.W, Yang, Y.
登録日2021-02-12
公開日2021-08-25
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献The molecular basis of regulation of bacterial capsule assembly by Wzc.
Nat Commun, 12, 2021
7NHS
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Wzc K540M C8
分子名称: Putative transmembrane protein Wzc
著者Naismith, J.H, Liu, J.W, Yang, Y.
登録日2021-02-11
公開日2021-08-25
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献The molecular basis of regulation of bacterial capsule assembly by Wzc.
Nat Commun, 12, 2021
7NII
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Wzc-K540M MgADP C1
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Putative transmembrane protein Wzc
著者Naismith, J.H, Liu, J.W, Yang, Y.
登録日2021-02-12
公開日2021-08-25
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献The molecular basis of regulation of bacterial capsule assembly by Wzc.
Nat Commun, 12, 2021
7NI2
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Wzc-K540M-4YE C8
分子名称: Tyrosine-protein kinase
著者Naismith, J.H, Liu, J.W, Yang, Y.
登録日2021-02-11
公開日2021-08-25
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献The molecular basis of regulation of bacterial capsule assembly by Wzc.
Nat Commun, 12, 2021
7NIB
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Wzc-K540M-4YE C1
分子名称: Tyrosine-protein kinase
著者Naismith, J.H, Liu, J.W, Yang, Y.
登録日2021-02-11
公開日2021-08-25
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.51 Å)
主引用文献The molecular basis of regulation of bacterial capsule assembly by Wzc.
Nat Commun, 12, 2021
8DSP
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Cryo-EM structure of the proximal half fiber in del7.3K2R1 mature phage
分子名称: Tail fiber protein
著者Wang, C, Liu, J, Molineux, I.J.
登録日2022-07-22
公開日2023-07-26
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Asymmetric reconstruction of gp8-gp11 with terminal dsDNA associated from the del7.3K2R1.
To Be Published
8E4G
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Remodeling of the bacteriophage T7 during initial infection
分子名称: Internal virion protein gp14, Internal virion protein gp15, Portal protein, ...
著者Wang, C, Liu, J, Molineux, I.J.
登録日2022-08-18
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Virion remodeling of bacteriophage T7 during infection initiation
To Be Published
4G43
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Structure of the chicken MHC class I molecule BF2*0401 complexed to P5E
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 8-MERIC PEPTIDE P5E, Beta-2 microglobulin, ...
著者Zhang, J, Chen, Y, Qi, J, Gao, F, Liu, J, Kaufman, J, Xia, C, Gao, G.F.
登録日2012-07-16
公開日2012-11-21
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Narrow Groove and Restricted Anchors of MHC Class I Molecule BF2*0401 Plus Peptide Transporter Restriction Can Explain Disease Susceptibility of B4 Chickens.
J.Immunol., 189, 2012
7SCD
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Ternary complex of fixed-arm Trx-3ost5 (I299E) with 8mer-1 octasaccharide substrate and co-factor product PAP
分子名称: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid, ADENOSINE-3'-5'-DIPHOSPHATE, Thioredoxin 1,Heparan sulfate glucosamine 3-O-sulfotransferase 5
著者Wander, R, Kaminski, A.M, Krahn, J.M, Liu, J, Pedersen, L.C.
登録日2021-09-27
公開日2022-01-19
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural and Substrate Specificity Analysis of 3-O-Sulfotransferase Isoform 5 to Synthesize Heparan Sulfate
Acs Catalysis, 11, 2021
7SCE
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Ternary complex of fixed-arm Trx-3ost5 (I299E) with 8mer-2 octasaccharide substrate and co-factor product PAP
分子名称: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid, ADENOSINE-3'-5'-DIPHOSPHATE, Thioredoxin 1,Heparan sulfate glucosamine 3-O-sulfotransferase 5
著者Wander, R, Kaminski, A.M, Krahn, J.M, Liu, J, Pedersen, L.C.
登録日2021-09-27
公開日2022-01-19
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural and Substrate Specificity Analysis of 3-O-Sulfotransferase Isoform 5 to Synthesize Heparan Sulfate
Acs Catalysis, 11, 2021

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