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PDB: 24 results

6ERJ
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BU of 6erj by Molmil
Self-complemented FimA subunit from Salmonella enterica
Descriptor: ACETIC ACID, Type-1 fimbrial protein, a chain
Authors:Zyla, D.S, Prota, A, Capitani, G, Glockshuber, R.
Deposit date:2017-10-18
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Alternative folding to a monomer or homopolymer is a common feature of the type 1 pilus subunit FimA from enteroinvasive bacteria.
J.Biol.Chem., 294, 2019
6R7E
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BU of 6r7e by Molmil
N-terminally reversed variant of FimA E. coli with alanine insertion at position 20
Descriptor: FimA, SULFATE ION
Authors:Zyla, D, Echeverria, B, Glockshuber, R.
Deposit date:2019-03-28
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Donor strand sequence, rather than donor strand orientation, determines the stability and non-equilibrium folding of the type 1 pilus subunit FimA.
J.Biol.Chem., 295, 2020
6R74
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BU of 6r74 by Molmil
N-terminally reversed variant of FimA E. coli
Descriptor: SULFATE ION, Type-1 fimbrial protein, A chain
Authors:Zyla, D, Echeverria, B, Glockshuber, R.
Deposit date:2019-03-28
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Donor strand sequence, rather than donor strand orientation, determines the stability and non-equilibrium folding of the type 1 pilus subunit FimA.
J.Biol.Chem., 295, 2020
6S09
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BU of 6s09 by Molmil
C-terminally extended and N-terminally truncated variant of FimA E. coli at 1.5 Angstrom resolution
Descriptor: ACETIC ACID, FimA, SODIUM ION, ...
Authors:Zyla, D, Echeverria, B, Glockshuber, R.
Deposit date:2019-06-14
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Donor strand sequence, rather than donor strand orientation, determines the stability and non-equilibrium folding of the type 1 pilus subunit FimA.
J.Biol.Chem., 295, 2020
5LP9
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BU of 5lp9 by Molmil
FimA wt from S. flexneri
Descriptor: Major type 1 subunit fimbrin (Pilin)
Authors:Zyla, D, Capitani, G, Prota, A, Glockshuber, R.
Deposit date:2016-08-12
Release date:2017-12-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (0.88626635 Å)
Cite:Alternative folding to a monomer or homopolymer is a common feature of the type 1 pilus subunit FimA from enteroinvasive bacteria.
J.Biol.Chem., 2019
5NKT
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BU of 5nkt by Molmil
FimA wt from E. coli
Descriptor: SULFATE ION, Type-1 fimbrial protein, A chain
Authors:Zyla, D, Capitani, G, Prota, A, Glockshuber, R.
Deposit date:2017-04-03
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Alternative folding to a monomer or homopolymer is a common feature of the type 1 pilus subunit FimA from enteroinvasive bacteria.
J.Biol.Chem., 2019
8UT2
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BU of 8ut2 by Molmil
Pre-fusion Measles virus fusion protein complexed with Fab 77
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zyla, D, Saphire, E.O.
Deposit date:2023-10-30
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:A neutralizing antibody prevents postfusion transition of measles virus fusion protein.
Science, 384, 2024
9AT8
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BU of 9at8 by Molmil
Fab 77-stabilized MeV F ectodomain fragment
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0, mAB 77 heavy chain, ...
Authors:Zyla, D, Saphire, E.O.
Deposit date:2024-02-26
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:A neutralizing antibody prevents postfusion transition of measles virus fusion protein.
Science, 384, 2024
8UTF
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BU of 8utf by Molmil
Structure of the Measles virus Fusion protein in the post-fusion conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0
Authors:Zyla, D, Saphire, E.O.
Deposit date:2023-10-31
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:A neutralizing antibody prevents postfusion transition of measles virus fusion protein.
Science, 384, 2024
8UUP
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BU of 8uup by Molmil
Structure of the Measles virus Fusion protein in the pre-fusion conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0, ...
Authors:Zyla, D, Saphire, E.O.
Deposit date:2023-11-01
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.11 Å)
Cite:A neutralizing antibody prevents postfusion transition of measles virus fusion protein.
Science, 384, 2024
8UUQ
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BU of 8uuq by Molmil
Structure of the Measles virus Fusion protein in the pre-fusion conformation with bound [FIP-HRC]2-PEG11
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0, [FIP-HRC]2-PEG11, ...
Authors:Zyla, D, Saphire, E.O.
Deposit date:2023-11-01
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.34 Å)
Cite:A neutralizing antibody prevents postfusion transition of measles virus fusion protein.
Science, 384, 2024
8PTU
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BU of 8ptu by Molmil
2.5 A cryo-EM structure of the in vitro FimD-catalyzed assembly of type 1 pilus rod
Descriptor: Type-1 fimbrial protein, A chain
Authors:Zyla, D, Hospenthal, M, Glockshuber, R, Waksman, G.
Deposit date:2023-07-14
Release date:2024-04-10
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.52 Å)
Cite:The assembly platform FimD is required to obtain the most stable quaternary structure of type 1 pili.
Nat Commun, 15, 2024
6Y7S
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BU of 6y7s by Molmil
2.85 A cryo-EM structure of the in vivo assembled type 1 pilus rod
Descriptor: Type-1 fimbrial protein, A chain
Authors:Zyla, D, Hospenthal, M, Waksman, G, Glockshuber, R.
Deposit date:2020-03-02
Release date:2021-03-31
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:The assembly platform FimD is required to obtain the most stable quaternary structure of type 1 pili.
Nat Commun, 15, 2024
6X84
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BU of 6x84 by Molmil
Sn-glycerol-3-phosphate binding periplasmic protein UgpB from Escherichia coli - W169S, W172S
Descriptor: GLYCEROL, sn-glycerol-3-phosphate-binding periplasmic protein UgpB
Authors:Wu, K, Zyla, D, Bardwell, J.C.A.
Deposit date:2020-06-01
Release date:2020-08-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:A metabolite binding protein moonlights as a bile-responsive chaperone.
Embo J., 39, 2020
6SYM
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BU of 6sym by Molmil
Crystal structure of Escherichia coli MsrB (reduced form)
Descriptor: Peptide methionine sulfoxide reductase MsrB, ZINC ION
Authors:Napolitano, S, Zyla, D, Glockshuber, R.
Deposit date:2019-09-30
Release date:2020-10-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.6302 Å)
Cite:Structure of Peptide methionine sulfoxide reductase MsrB at 1.63 Angstrom resolution
To Be Published
7U9G
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BU of 7u9g by Molmil
Rabies virus glycoprotein pre-fusion trimer in complex with neutralizing antibody RVA122
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein, RVA122 Fab Heavy Chain, ...
Authors:Callaway, H.M, Zyla, D, Larrous, F, Dias de Melo, G, Hastie, K.M, Avalos, R.D, Agarwal, A, Bouhry, H, Corti, D, Saphire, E.O.
Deposit date:2022-03-10
Release date:2022-07-20
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Structure of the rabies virus glycoprotein trimer bound to a prefusion-specific neutralizing antibody.
Sci Adv, 8, 2022
8PSV
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BU of 8psv by Molmil
2.7 A cryo-EM structure of in vitro assembled type 1 pilus rod
Descriptor: Type-1 fimbrial protein, A chain
Authors:Hospenthal, M, Zyla, D, Glockshuber, R, Waksman, G.
Deposit date:2023-07-13
Release date:2024-04-10
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:The assembly platform FimD is required to obtain the most stable quaternary structure of type 1 pili.
Nat Commun, 15, 2024
6ZS5
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BU of 6zs5 by Molmil
3.5 A cryo-EM structure of human uromodulin filament core
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Uromodulin, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Stanisich, J.J, Zyla, D, Afanasyev, P, Xu, J, Pilhofer, M, Boeringer, D, Glockshuber, R.
Deposit date:2020-07-15
Release date:2020-09-02
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The cryo-EM structure of the human uromodulin filament core reveals a unique assembly mechanism.
Elife, 9, 2020
6ZYA
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BU of 6zya by Molmil
Extended human uromodulin filament core at 3.5 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Uromodulin, alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Stanisich, J.J, Zyla, D, Afanasyev, P, Xu, J, Pilhofer, M, Boeringer, D, Glockshuber, R.
Deposit date:2020-07-31
Release date:2020-09-02
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The cryo-EM structure of the human uromodulin filament core reveals a unique assembly mechanism.
Elife, 9, 2020
6YEV
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BU of 6yev by Molmil
Crystal structure of MsrA C206 and Trx C35S complex from Escherichia coli
Descriptor: Peptide methionine sulfoxide reductase MsrA, SODIUM ION, Thioredoxin 1
Authors:Napolitano, S, Zyla, D, Glockshuber, R.
Deposit date:2020-03-25
Release date:2021-04-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Structure of a complex between the single-cysteine mutant MsrA C206 and Trx C35S from Escherichia coli
To Be Published
8DMH
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BU of 8dmh by Molmil
Lymphocytic choriomeningitis virus glycoprotein in complex with neutralizing antibody M28
Descriptor: 18.5C-M28 Fab Heavy Chain, 18.5C-M28 Fab Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Moon-Walker, A, Hastie, K.M, Zyla, D.S, Saphire, E.O.
Deposit date:2022-07-08
Release date:2023-04-12
Last modified:2023-05-03
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Structural basis for antibody-mediated neutralization of lymphocytic choriomeningitis virus.
Cell Chem Biol, 30, 2023
8DMI
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BU of 8dmi by Molmil
Lymphocytic choriomeningitis virus glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein G1, ...
Authors:Moon-Walker, A, Hastie, K.M, Zyla, D.S, Saphire, E.O.
Deposit date:2022-07-08
Release date:2023-04-12
Last modified:2023-05-03
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structural basis for antibody-mediated neutralization of lymphocytic choriomeningitis virus.
Cell Chem Biol, 30, 2023
8F0G
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BU of 8f0g by Molmil
Structure of SARS-CoV-2 Omicron BA.1 spike in complex with antibody Fab 1C3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody 1C3 Fab Heavy Chain, ...
Authors:Yu, X, Zyla, D, Hastie, K.M, Saphire, E.O.
Deposit date:2022-11-02
Release date:2023-05-03
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Potent Omicron-neutralizing antibodies isolated from a patient vaccinated 6 months before Omicron emergence.
Cell Rep, 42, 2023
8F0H
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BU of 8f0h by Molmil
Structure of SARS-CoV-2 spike with antibody Fabs 2A10 and 1H2 (Local refinement of the RBD and Fabs 1H2 and 2A10)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody Fab 1H2 heavy chain, Antibody Fab 1H2 light chain, ...
Authors:Yu, X, Zyla, D, Hastie, K.M, Saphire, E.O.
Deposit date:2022-11-02
Release date:2023-05-03
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Potent Omicron-neutralizing antibodies isolated from a patient vaccinated 6 months before Omicron emergence.
Cell Rep, 42, 2023

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PDB entries from 2024-07-17

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