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PDB: 56 results

1SVM
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BU of 1svm by Molmil
Co-crystal structure of SV40 large T antigen helicase domain and ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ZINC ION, ...
Authors:Gai, D, Zhao, R, Finkielstein, C.V, Chen, X.S.
Deposit date:2004-03-29
Release date:2004-10-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Mechanisms of conformational change for a replicative hexameric helicase of SV40 large tumor antigen.
Cell(Cambridge,Mass.), 119, 2004
1SVO
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BU of 1svo by Molmil
Structure of SV40 large T antigen helicase domain
Descriptor: ZINC ION, large T antigen
Authors:Gai, D, Zhao, R, Finkielstein, C.V, Chen, X.S.
Deposit date:2004-03-29
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Mechanisms of conformational change for a replicative hexameric helicase of SV40 large tumor antigen.
Cell(Cambridge,Mass.), 119, 2004
1OOI
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BU of 1ooi by Molmil
Crystal structure of LUSH from Drosophila melanogaster at pH 6.5
Descriptor: odorant binding protein LUSH
Authors:Kruse, S.W, Zhao, R, Smith, D.P, Jones, D.N.M.
Deposit date:2003-03-03
Release date:2003-09-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structure of a specific alcohol-binding site defined by the odorant binding protein LUSH from Drosophila melanogaster
Nat.Struct.Biol., 10, 2003
1OOF
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BU of 1oof by Molmil
Complex of Drosophila odorant binding protein LUSH with ethanol
Descriptor: ACETATE ION, ETHANOL, odorant binding protein LUSH
Authors:Kruse, S.W, Zhao, R, Smith, D.P, Jones, D.N.M.
Deposit date:2003-03-03
Release date:2003-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structure of a specific alcohol-binding site defined by the odorant binding protein LUSH from Drosophila melanogaster
Nat.Struct.Biol., 10, 2003
1SVL
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BU of 1svl by Molmil
Co-crystal structure of SV40 large T antigen helicase domain and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ZINC ION, ...
Authors:Gai, D, Zhao, R, Finkielstein, C.V, Chen, X.S.
Deposit date:2004-03-29
Release date:2004-10-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mechanisms of conformational change for a replicative hexameric helicase of SV40 large tumor antigen.
Cell(Cambridge,Mass.), 119, 2004
3HIB
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BU of 3hib by Molmil
Crystal structure of the second Sec63 domain of yeast Brr2
Descriptor: Pre-mRNA-splicing helicase BRR2
Authors:Zhang, L, Xu, T, Zhao, R.
Deposit date:2009-05-19
Release date:2009-06-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural evidence for consecutive Hel308-like modules in the spliceosomal ATPase Brr2.
Nat.Struct.Mol.Biol., 16, 2009
3HXI
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BU of 3hxi by Molmil
Crystal structure of Schistosome eIF4E complexed with m7GpppG and 4E-BP
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, Eukaryotic Translation Initiation 4E, Eukaryotic translation initiation factor 4E-binding protein 1
Authors:Liu, W, Zhao, R, Jones, D.N.M, Davis, R.E.
Deposit date:2009-06-20
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into parasite EIF4E binding specificity for m7G and m2,2,7G mRNA cap.
J.Biol.Chem., 284, 2009
3HZH
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BU of 3hzh by Molmil
Crystal structure of the CheX-CheY-BeF3-Mg+2 complex from Borrelia burgdorferi
Descriptor: Chemotaxis operon protein (CheX), Chemotaxis response regulator (CheY-3), MAGNESIUM ION
Authors:Pazy, Y, Silversmith, R.E, Guarinari, M, Zhao, R.
Deposit date:2009-06-23
Release date:2010-02-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Identical phosphatase mechanisms achieved through distinct modes of binding phosphoprotein substrate.
Proc.Natl.Acad.Sci.USA, 107, 2010
3HXG
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BU of 3hxg by Molmil
Crystal structure of Schistsome eIF4E complexed with m7GpppA and 4E-BP
Descriptor: Eukaryotic Translation Initiation Factor 4E, Eukaryotic translation initiation factor 4E-binding protein 1, P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE
Authors:Liu, W, Zhao, R, Jones, D.N.M, Davis, R.E.
Deposit date:2009-06-20
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into parasite EIF4E binding specificity for m7G and m2,2,7G mRNA cap.
J.Biol.Chem., 284, 2009
3E66
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BU of 3e66 by Molmil
Crystal structure of the beta-finger domain of yeast Prp8
Descriptor: PRP8
Authors:Yang, K, Zhang, L, Xu, T, Heroux, A, Zhao, R.
Deposit date:2008-08-14
Release date:2008-10-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of the beta-finger domain of Prp8 reveals analogy to ribosomal proteins.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3CGY
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BU of 3cgy by Molmil
Crystal Structure of Salmonella Sensor Kinase PhoQ catalytic domain in complex with radicicol
Descriptor: RADICICOL, Virulence sensor histidine kinase phoQ
Authors:Guarnieri, M.T, Zhang, L, Shen, J, Zhao, R.
Deposit date:2008-03-06
Release date:2008-05-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Hsp90 inhibitor radicicol interacts with the ATP-binding pocket of bacterial sensor kinase PhoQ.
J.Mol.Biol., 379, 2008
3CGZ
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BU of 3cgz by Molmil
Crystal Structure of Salmonella Sensor Kinase PhoQ catalytic domain
Descriptor: Virulence sensor histidine kinase phoQ
Authors:Guarnieri, M.T, Zhang, L, Shen, J, Zhao, R.
Deposit date:2008-03-06
Release date:2008-05-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Hsp90 inhibitor radicicol interacts with the ATP-binding pocket of bacterial sensor kinase PhoQ.
J.Mol.Biol., 379, 2008
1D4Z
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BU of 1d4z by Molmil
CRYSTAL STRUCTURE OF CHEY-95IV, A HYPERACTIVE CHEY MUTANT
Descriptor: CHEMOTAXIS PROTEIN CHEY, SULFATE ION
Authors:Schuster, M, Zhao, R, Bourret, R.B, Collins, E.J.
Deposit date:1999-10-06
Release date:1999-10-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Correlated switch binding and signaling in bacterial chemotaxis.
J.Biol.Chem., 275, 2000
3N3Z
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BU of 3n3z by Molmil
Crystal structure of PDE9A (E406A) mutant in complex with IBMX
Descriptor: 3-ISOBUTYL-1-METHYLXANTHINE, CHLORIDE ION, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, ...
Authors:Hou, J, Luo, H.-B, Chen, Y, Xu, J, Zhao, R, Zou, L.
Deposit date:2010-05-21
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of PDE9A (E406A) mutation in complex with IBMX
To be Published
8JED
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BU of 8jed by Molmil
Crystal structure of mRNA cap (guanine-N7) methyltransferase E12 subunit from monkeypox virus and discovery of its inhibitors
Descriptor: mRNA-capping enzyme regulatory subunit OPG124
Authors:Wang, D, Zhao, R, Shu, W, Hu, W, Wang, M, Cao, J, Zhou, X.
Deposit date:2023-05-15
Release date:2023-12-06
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of mRNA cap (guanine-N7) methyltransferase E12 subunit from monkeypox virus and discovery of its inhibitors.
Int.J.Biol.Macromol., 253, 2023
3QI4
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BU of 3qi4 by Molmil
Crystal structure of PDE9A(Q453E) in complex with IBMX
Descriptor: 3-ISOBUTYL-1-METHYLXANTHINE, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
Authors:Hou, J, Xu, J, Liu, M, Zhao, R, Lou, H, Ke, H.
Deposit date:2011-01-26
Release date:2011-04-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural asymmetry of phosphodiesterase-9, potential protonation of a glutamic Acid, and role of the invariant glutamine.
Plos One, 6, 2011
3QI3
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BU of 3qi3 by Molmil
Crystal structure of PDE9A(Q453E) in complex with inhibitor BAY73-6691
Descriptor: 1-(2-chlorophenyl)-6-[(2R)-3,3,3-trifluoro-2-methylpropyl]-1,7-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
Authors:Hou, J, Xu, J, Liu, M, Zhao, R, Lou, H, Ke, H.
Deposit date:2011-01-26
Release date:2011-04-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural asymmetry of phosphodiesterase-9, potential protonation of a glutamic Acid, and role of the invariant glutamine.
Plos One, 6, 2011
7VYV
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BU of 7vyv by Molmil
Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae
Descriptor: Depolymerase
Authors:Cai, R, Ren, Z, Zhao, R, Wang, X, Guo, Z, Du, R, Han, W, Ru, H, Gu, J.
Deposit date:2021-11-15
Release date:2023-08-30
Method:ELECTRON MICROSCOPY (2.32 Å)
Cite:Depo32, a depolymerase of Klebsiella phage, efficiently controls infection caused by Klebsiella pneumoniae with K2 serotype CPS
To Be Published
7VZ3
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BU of 7vz3 by Molmil
Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae
Descriptor: Depolymerase
Authors:Cai, R, Ren, Z, Zhao, R, Wang, X, Guo, Z, Du, R, Han, W, Ru, H, Gu, J.
Deposit date:2021-11-15
Release date:2023-08-30
Method:ELECTRON MICROSCOPY (2.46 Å)
Cite:Depo32, a depolymerase of Klebsiella phage, efficiently controls infection caused by Klebsiella pneumoniae with K2 serotype CPS
To Be Published
2L6J
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BU of 2l6j by Molmil
Tah1 complexed by MEEVD
Descriptor: C-terminus Hsp90 chaperone peptide MEEVD, TPR repeat-containing protein associated with Hsp90
Authors:Jimenez, B, Ugwu, F, Zhao, R, Orti, L, Houry, W.A, Pineda-Lucena, A.
Deposit date:2010-11-22
Release date:2011-12-28
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of minimal tetratricopeptide repeat domain protein Tah1 reveals mechanism of its interaction with Pih1 and Hsp90.
J.Biol.Chem., 287, 2012
2N6B
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BU of 2n6b by Molmil
NMR structure of the de-novo toxin Hui1
Descriptor: Hui1
Authors:Mendelman, N, Zhao, R, Goldstein, S.A.N, Chill, J.H.
Deposit date:2015-08-17
Release date:2015-12-16
Last modified:2015-12-30
Method:SOLUTION NMR
Cite:Designer and natural peptide toxin blockers of the KcsA potassium channel identified by phage display.
Proc.Natl.Acad.Sci.USA, 112, 2015
2P8R
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BU of 2p8r by Molmil
Crystal structure of the C-terminal domain of C. elegans pre-mRNA splicing factor Prp8 carrying R2303K mutant
Descriptor: Pre-mRNA-splicing factor Prp8
Authors:Zhang, L, Shen, J, Guarnieri, M.T, Heroux, A, Yang, K, Zhao, R.
Deposit date:2007-03-22
Release date:2007-05-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the C-terminal domain of splicing factor Prp8 carrying retinitis pigmentosa mutants
Protein Sci., 16, 2007
2P87
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BU of 2p87 by Molmil
Crystal structure of the C-terminal domain of C. elegans pre-mRNA splicing factor Prp8
Descriptor: Pre-mRNA-splicing factor Prp8
Authors:Zhang, L, Shen, J, Guarnieri, M.T, Heroux, A, Yang, K, Zhao, R.
Deposit date:2007-03-21
Release date:2007-05-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the C-terminal domain of splicing factor Prp8 carrying retinitis pigmentosa mutants
Protein Sci., 16, 2007
8IKL
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BU of 8ikl by Molmil
Cryo-EM structure of the CD97-G13 complex
Descriptor: Adhesion G protein-coupled receptor E5, Guanine nucleotide-binding protein G(13) subunit alpha isoforms short, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Mao, C, Zhao, R, Dong, Y, Gao, M, Chen, L, Zhang, C, Xiao, P.
Deposit date:2023-02-28
Release date:2024-01-24
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.33 Å)
Cite:Conformational transitions and activation of the adhesion receptor CD97.
Mol.Cell, 84, 2024
8IKJ
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BU of 8ikj by Molmil
Cryo-EM structure of the inactive CD97
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Adhesion G protein-coupled receptor E5,Soluble cytochrome b562,Adhesion G protein-coupled receptor E5 subunit beta
Authors:Mao, C, Zhao, R, Dong, Y, Gao, M, Chen, L, Zhang, C, Xiao, P, Guo, J, Qin, J, Shen, D, Ji, S, Zang, S, Zhang, H, Wang, W, Shen, Q, Sun, P, Zhang, Y.
Deposit date:2023-02-28
Release date:2024-02-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Conformational transitions and activation of the adhesion receptor CD97.
Mol.Cell, 84, 2024

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