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PDB: 342 results

7ZKA
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BU of 7zka by Molmil
ABCB1 V978C mutant (mABCB1) in the outward facing state bound to AAC
Descriptor: (4~{S},11~{S},18~{S})-4,11-dimethyl-18-(sulfanylmethyl)-6,13,20-trithia-3,10,17,22,23,24-hexazatetracyclo[17.2.1.1^{5,8}.1^{12,15}]tetracosa-1(21),5(24),7,12(23),14,19(22)-hexaene-2,9,16-trione, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent translocase ABCB1, ...
Authors:Parey, K, Januliene, D, Gewering, T, Urbatsch, I, Zhang, Q, Moeller, A.
Deposit date:2022-04-12
Release date:2023-04-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Tracing the substrate translocation mechanism in P-glycoprotein.
Elife, 12, 2024
7X78
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BU of 7x78 by Molmil
L-fuculose 1-phosphate aldolase
Descriptor: L-fuculose phosphate aldolase, MAGNESIUM ION, SULFATE ION
Authors:Lou, X, Zhang, Q, Bartlam, M.
Deposit date:2022-03-09
Release date:2022-04-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural characterization of an L-fuculose-1-phosphate aldolase from Klebsiella pneumoniae.
Biochem.Biophys.Res.Commun., 607, 2022
8JON
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BU of 8jon by Molmil
Structure of a synthetic circadian clock protein KaiC mutant of cyanobacteria Synechococcus elongatus PCC 7942
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Circadian clock oscillator protein KaiC, ...
Authors:Jia, X, Zhang, Q, Li, S, Guo, J.
Deposit date:2023-06-07
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:Adaptation of ancient cyanobacterial clock to the day length ~ 0.95 Ga ago
To Be Published
7C81
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BU of 7c81 by Molmil
E30 F-particle in complex with 6C5
Descriptor: Heavy chain, Light chain, SPHINGOSINE, ...
Authors:Wang, K, Zheng, B, Zhang, L, Cui, L, Su, X, Zhang, Q, Guo, Y, Zhu, L, Zhu, F, Rao, Z, Wang, X.
Deposit date:2020-05-28
Release date:2020-07-29
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Serotype specific epitopes identified by neutralizing antibodies underpin immunogenic differences in Enterovirus B.
Nat Commun, 11, 2020
7C80
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BU of 7c80 by Molmil
E30 F-particle in complex with 4B10
Descriptor: Heavy chain, Light chain, SPHINGOSINE, ...
Authors:Wang, K, Zheng, B, Zhang, L, Cui, L, Su, X, Zhang, Q, Guo, Y, Zhu, L, Zhu, F, Rao, Z, Wang, X.
Deposit date:2020-05-28
Release date:2020-07-29
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Serotype specific epitopes identified by neutralizing antibodies underpin immunogenic differences in Enterovirus B.
Nat Commun, 11, 2020
4NYL
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BU of 4nyl by Molmil
Crystal structure of adalimumab FAB fragment
Descriptor: Adalimumab Heavy Chain, Adalimumab Light Chain
Authors:Fan, L.J, Lv, L.L, Zhang, Q.J, Chen, C.L.
Deposit date:2013-12-10
Release date:2014-12-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of adalimumab FAB fragment
To be Published
8W9W
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BU of 8w9w by Molmil
The cryo-EM structure of human sphingomyelin synthase-related protein in complex with ceramide/phosphoethanolamine
Descriptor: PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER, Sphingomyelin synthase-related protein 1, ~{N}-[(~{Z},2~{S},3~{R})-1,3-bis(oxidanyl)heptadec-4-en-2-yl]dodecanamide
Authors:Hu, K, Zhang, Q, Chen, Y, Yao, D, Zhou, L, Cao, Y.
Deposit date:2023-09-06
Release date:2024-02-28
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.74 Å)
Cite:Cryo-EM structure of human sphingomyelin synthase and its mechanistic implications for sphingomyelin synthesis.
Nat.Struct.Mol.Biol., 31, 2024
8W9Y
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BU of 8w9y by Molmil
The cryo-EM structure of human sphingomyelin synthase-related protein
Descriptor: Sphingomyelin synthase-related protein 1
Authors:Hu, K, Zhang, Q, Chen, Y, Yao, D, Zhou, L, Cao, Y.
Deposit date:2023-09-06
Release date:2024-02-28
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structure of human sphingomyelin synthase and its mechanistic implications for sphingomyelin synthesis.
Nat.Struct.Mol.Biol., 31, 2024
7U4A
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BU of 7u4a by Molmil
Crystal Structure of Zika virus xrRNA1 mutant
Descriptor: MAGNESIUM ION, RNA (70-MER)
Authors:Thompson, R.D, Carbaugh, D.L, Nielsen, J.R, Witt, C, Meganck, R.M, Rangadurai, A, Zhao, B, Bonin, J.P, Nathan, N.T, Marzluff, W.F, Frank, A.T, Lazear, H.M, Zhang, Q.
Deposit date:2022-02-28
Release date:2023-09-06
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Dynamic Basis of Xrn1 Resistance in Mosquito-borne Flavivirus RNA
To Be Published
6RIC
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BU of 6ric by Molmil
Structure of the core Vaccinia Virus DNA-dependent RNA polymerase complex
Descriptor: DNA-dependent RNA polymerase subunit rpo132, DNA-dependent RNA polymerase subunit rpo147, DNA-dependent RNA polymerase subunit rpo18, ...
Authors:Grimm, C, Hillen, H.S, Bedenk, K, Bartuli, J, Neyer, S, Zhang, Q, Huettenhofer, A, Erlacher, M, Dienemann, C, Schlosser, A, Urlaub, H, Boettcher, B, Szalay, A, Cramer, P, Fischer, U.
Deposit date:2019-04-23
Release date:2019-12-18
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural Basis of Poxvirus Transcription: Transcribing and Capping Vaccinia Complexes.
Cell, 179, 2019
7D54
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BU of 7d54 by Molmil
Crstal structure MsGATase with Gln
Descriptor: GLUTAMINE, Glutamine amidotransferase class-I
Authors:Chen, Y, Zhang, Q, Bartlam, M.
Deposit date:2020-09-24
Release date:2021-10-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and mechanism of the gamma-glutamyl-gamma-aminobutyrate hydrolase SpuA from Pseudomonas aeruginosa.
Acta Crystallogr D Struct Biol, 77, 2021
7D4R
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BU of 7d4r by Molmil
SpuA native structure
Descriptor: MAGNESIUM ION, Probable glutamine amidotransferase
Authors:Chen, Y, Zhang, Q, Bartlam, M.
Deposit date:2020-09-24
Release date:2021-10-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and mechanism of the gamma-glutamyl-gamma-aminobutyrate hydrolase SpuA from Pseudomonas aeruginosa.
Acta Crystallogr D Struct Biol, 77, 2021
7D50
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BU of 7d50 by Molmil
SpuA mutant - H221N with glutamyl-thioester
Descriptor: MAGNESIUM ION, Probable glutamine amidotransferase
Authors:Chen, Y, Zhang, Q, Bartlam, M.
Deposit date:2020-09-24
Release date:2021-10-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structure and mechanism of the gamma-glutamyl-gamma-aminobutyrate hydrolase SpuA from Pseudomonas aeruginosa.
Acta Crystallogr D Struct Biol, 77, 2021
7D53
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BU of 7d53 by Molmil
SpuA mutant - H221N with Glu
Descriptor: GLUTAMIC ACID, MAGNESIUM ION, Probable glutamine amidotransferase
Authors:Chen, Y, Zhang, Q, Bartlam, M.
Deposit date:2020-09-24
Release date:2021-10-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and mechanism of the gamma-glutamyl-gamma-aminobutyrate hydrolase SpuA from Pseudomonas aeruginosa.
Acta Crystallogr D Struct Biol, 77, 2021
8GPD
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BU of 8gpd by Molmil
Crystal structure of NDM-1 at pH5.5 (Succinate) in complex with hydrolyzed penicillin V
Descriptor: (2R,4S)-5,5-dimethyl-2-[(1R)-2-oxidanyl-2-oxidanylidene-1-(2-phenoxyethanoylamino)ethyl]-1,3-thiazolidine-4-carboxylic acid, Metallo beta lactamase NDM-1, POTASSIUM ION, ...
Authors:Shi, X, Dai, Y, Zhang, Q, Liu, W.
Deposit date:2022-08-26
Release date:2023-08-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Interplay between the beta-lactam side chain and an active-site mobile loop of NDM-1 in penicillin hydrolysis as a potential target for mechanism-based inhibitor design.
Int.J.Biol.Macromol., 262, 2024
8GPC
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BU of 8gpc by Molmil
Crystal structure of NDM-1 at pH5.5 (Succinate) in complex with hydrolyzed ampicillin
Descriptor: (2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Metallo beta lactamase NDM-1, SODIUM ION, ...
Authors:Shi, X, Dai, Y, Zhang, Q, Liu, W.
Deposit date:2022-08-26
Release date:2023-08-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Interplay between the beta-lactam side chain and an active-site mobile loop of NDM-1 in penicillin hydrolysis as a potential target for mechanism-based inhibitor design.
Int.J.Biol.Macromol., 262, 2024
8GPE
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BU of 8gpe by Molmil
Crystal structure of NDM-1 at pH5.5 (Succinate) in complex with hydrolyzed penicillin G
Descriptor: (2R,4S)-2-{(R)-carboxy[(phenylacetyl)amino]methyl}-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Metallo beta lactamase NDM-1, POTASSIUM ION, ...
Authors:Shi, X, Dai, Y, Zhang, Q, Liu, W.
Deposit date:2022-08-26
Release date:2023-08-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Interplay between the beta-lactam side chain and an active-site mobile loop of NDM-1 in penicillin hydrolysis as a potential target for mechanism-based inhibitor design.
Int.J.Biol.Macromol., 262, 2024
8IJR
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BU of 8ijr by Molmil
The cryo-EM structure of human sphingomyelin synthase-related protein in complex with diacylglycerol/phosphoethanolamine
Descriptor: (2S)-1-(hexadecanoyloxy)-3-hydroxypropan-2-yl (11Z)-octadec-11-enoate, PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER, Sphingomyelin synthase-related protein 1
Authors:Hu, K, Zhang, Q, Chen, Y, Yao, D, Zhou, L, Cao, Y.
Deposit date:2023-02-28
Release date:2024-02-28
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Cryo-EM structure of human sphingomyelin synthase and its mechanistic implications for sphingomyelin synthesis.
Nat.Struct.Mol.Biol., 31, 2024
8IJQ
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BU of 8ijq by Molmil
The cryo-EM structure of human sphingomyelin synthase-related protein in complex with ceramide
Descriptor: N-((E,2S,3R)-1,3-DIHYDROXYOCTADEC-4-EN-2-YL)PALMITAMIDE, Sphingomyelin synthase-related protein 1
Authors:Hu, K, Zhang, Q, Chen, Y, Yao, D, Zhou, L, Cao, Y.
Deposit date:2023-02-27
Release date:2024-02-28
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Cryo-EM structure of human sphingomyelin synthase and its mechanistic implications for sphingomyelin synthesis.
Nat.Struct.Mol.Biol., 31, 2024
2L1V
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BU of 2l1v by Molmil
Solution structure of a preQ1 riboswitch (Class I) aptamer bound to preQ1
Descriptor: 36-MER, 7-DEAZA-7-AMINOMETHYL-GUANINE
Authors:Kang, M, Zhang, Q, Feigon, J.
Deposit date:2010-08-06
Release date:2010-09-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Insights into Riboswitch Control of the Biosynthesis of Queuosine, a Modified Nucleotide Found in the Anticodon of tRNA
Mol.Cell, 33, 2009
7VOI
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BU of 7voi by Molmil
Structure of the human CNOT1(MIF4G)-CNOT6L-CNOT7 complex
Descriptor: CCR4-NOT transcription complex subunit 1, CCR4-NOT transcription complex subunit 6-like, CCR4-NOT transcription complex subunit 7
Authors:Bartlam, M, Zhang, Q.
Deposit date:2021-10-13
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (4.38 Å)
Cite:Structure of the human Ccr4-Not nuclease module using X-ray crystallography and electron paramagnetic resonance spectroscopy distance measurements.
Protein Sci., 31, 2022
5YKR
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BU of 5ykr by Molmil
Crystal structure of a glutamate-1-semialdehyde-aminomutase from Pseudomonas aeruginosa PAO1
Descriptor: Probable aminotransferase
Authors:Li, S, Zhang, Q, Bartlam, M.
Deposit date:2017-10-16
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Crystal structure of a glutamate-1-semialdehyde-aminomutase from Pseudomonas aeruginosa PAO1.
Biochem. Biophys. Res. Commun., 500, 2018
5YKT
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BU of 5ykt by Molmil
Crystal structure of a glutamate-1-semialdehyde-aminomutase (K286A) from Pseudomonas aeruginosa PAO1 in complex with PMP
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, GLYCEROL, Probable aminotransferase
Authors:Li, S, Zhang, Q, Bartlam, M.
Deposit date:2017-10-16
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystal structure of a glutamate-1-semialdehyde-aminomutase from Pseudomonas aeruginosa PAO1.
Biochem. Biophys. Res. Commun., 500, 2018
7DVQ
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BU of 7dvq by Molmil
Cryo-EM Structure of the Activated Human Minor Spliceosome (minor Bact Complex)
Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, 5'-O-[(S)-hydroxy{[(R)-hydroxy{[(S)-hydroxy(methoxy)phosphoryl]oxy}phosphoryl]oxy}phosphoryl]guanosine, Armadillo repeat-containing protein 7, ...
Authors:Bai, R, Wan, R, Wang, L, Xu, K, Zhang, Q, Lei, J, Shi, Y.
Deposit date:2021-01-14
Release date:2021-03-31
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Structure of the activated human minor spliceosome.
Science, 371, 2021
7FJB
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BU of 7fjb by Molmil
KpAckA (PduW) with AMPPNP, sodium acetate complex structure
Descriptor: ACETATE ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Probable propionate kinase, ...
Authors:Wenyue, W, Zhang, Q, Bartlam, M.
Deposit date:2021-08-03
Release date:2022-08-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:KpAckA (PduW) with AMPPNP, sodium acetate complex structure
To Be Published

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