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PDB: 404 results

5AFR
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BU of 5afr by Molmil
N-terminal fragment of dynein heavy chain
Descriptor: DYNEIN HEAVY CHAIN, CYTOPLASMIC
Authors:Urnavicius, L, Zhang, K, Diamant, A.G, Motz, C, Schlager, M.A, Yu, M, Patel, N.A, Robinson, C.V, Carter, A.P.
Deposit date:2015-01-23
Release date:2015-02-18
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (5 Å)
Cite:The Structure of the Dynactin Complex and its Interaction with Dynein.
Science, 347, 2015
4CKG
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BU of 4ckg by Molmil
Helical reconstruction of ACAP1(BAR-PH domain) decorated membrane tubules by cryo-electron microscopy
Descriptor: ARF-GAP WITH COILED-COIL, ANK REPEAT AND PH DOMAIN-CONTAINING PROTEIN 1
Authors:Pang, X.Y, Fan, J, Zhang, Y, Zhang, K, Gao, B.Q, Ma, J, Li, J, Deng, Y.C, Zhou, Q.J, Hsu, V, Sun, F.
Deposit date:2014-01-06
Release date:2014-10-15
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (15 Å)
Cite:A Ph Domain in Acap1 Possesses Key Features of the Bar Domain in Promoting Membrane Curvature.
Dev.Cell, 31, 2014
5EWP
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BU of 5ewp by Molmil
ARO (armadillo repeats only protein) from Plasmodium falciparum
Descriptor: ARO (armadillo repeats only protein)
Authors:Brown, C, Zhang, K, Emery, J, Prusty, D, Wetzel, J, Heincke, D, Gilberger, T, Junop, M.
Deposit date:2015-11-20
Release date:2016-01-27
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:ARO (armadillo repeats only protein) from Plasmodium falciparum
To Be Published
7XN1
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BU of 7xn1 by Molmil
Crystal structure of human acetylcholinesterase in complex with tacrine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, Acetylcholinesterase, ...
Authors:Dileep, K.V, Ihara, K, Mishima-Tsumagari, C, Kukimoto-Niino, M, Yonemochi, M, Hanada, K, Shirouzu, M, Zhang, K.Y.J.
Deposit date:2022-04-27
Release date:2023-03-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of human acetylcholinesterase in complex with tacrine: Implications for drug discovery
Int.J.Biol.Macromol., 210, 2022
6BDA
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BU of 6bda by Molmil
Wild-type I-OnuI bound to A3G substrate (post-cleavage complex)
Descriptor: Cleaved Cognate DNA strand, +11 sense, Cleaved cognate DNA strand, ...
Authors:Brown, C, Zhang, K, Laforet, M, McMurrough, T, Gloor, G.B, Edgell, D.R, Junop, M.
Deposit date:2017-10-22
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Wild-type I-OnuI bound to A3G substrate (post-cleavage complex)
To Be Published
6BDG
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BU of 6bdg by Molmil
HFQ monomer in spacegroup p6 at 1.93 angstrom resolution
Descriptor: RNA-binding protein Hfq
Authors:Brown, C, Zhang, K, Seo, C, Ellis, M.J, Hanniford, D.B, Junop, M.
Deposit date:2017-10-23
Release date:2017-11-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.964 Å)
Cite:HFQ monomer in spacegroup p6 at 1.93 angstrom resolution
To Be Published
8XVC
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BU of 8xvc by Molmil
CryoEM structure of ADP-DNA-MuB conformation1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent target DNA activator B
Authors:Zhao, X, Zhang, K, Li, S.
Deposit date:2024-01-14
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (4.32 Å)
Cite:Elucidating the Architectural dynamics of MuB filaments in bacteriophage Mu DNA transposition.
Nat Commun, 15, 2024
8XVD
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BU of 8xvd by Molmil
CryoEM structure of ADP-DNA-MuB conformation2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent target DNA activator B
Authors:Zhao, X, Zhang, K, Li, S.
Deposit date:2024-01-14
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (4.43 Å)
Cite:Elucidating the Architectural dynamics of MuB filaments in bacteriophage Mu DNA transposition.
Nat Commun, 15, 2024
8D1T
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BU of 8d1t by Molmil
Crystal structure of human USP30 in complex with a covalent inhibitor 552 and a Fab
Descriptor: (1R,2R,4S,7E)-7-[amino(sulfanyl)methylidene]-2-{[(1P)-3-chloro-3'-(1-cyanocyclopropyl)[1,1'-biphenyl]-4-carbonyl]amino}-7-azabicyclo[2.2.1]heptan-7-ium, 1,2-ETHANEDIOL, Ubiquitin carboxyl-terminal hydrolase 30, ...
Authors:Song, X, Butler, J, Li, C, Zhang, K, Zhang, D, Hao, Y.
Deposit date:2022-05-27
Release date:2023-02-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:TBD
To Be Published
4HND
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BU of 4hnd by Molmil
Crystal structure of the catalytic domain of Selenomethionine substituted human PI4KIIalpha in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Phosphatidylinositol 4-kinase type 2-alpha
Authors:Zhou, Q, Zhai, Y, Zhang, K, Chen, C, Sun, F.
Deposit date:2012-10-19
Release date:2014-04-09
Last modified:2016-12-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Molecular insights into the membrane-associated phosphatidylinositol 4-kinase II alpha.
Nat Commun, 5, 2014
4HNE
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BU of 4hne by Molmil
Crystal structure of the catalytic domain of human type II alpha Phosphatidylinositol 4-kinase (PI4KIIalpha) in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Phosphatidylinositol 4-kinase type 2-alpha
Authors:Zhou, Q, Zhai, Y, Zhang, K, Chen, C, Sun, F.
Deposit date:2012-10-19
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Molecular insights into the membrane-associated phosphatidylinositol 4-kinase II alpha.
Nat Commun, 5, 2014
6BD0
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BU of 6bd0 by Molmil
I-OnuI K227Y, D236A bound to cognate substrate (pre-cleavage complex)
Descriptor: CALCIUM ION, DNA (25-MER), Ribosomal protein 3/homing endonuclease-like protein fusion
Authors:Brown, C, Zhang, K, Laforet, M, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
Deposit date:2017-10-20
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:I-OnuI K227Y, D236A bound to cognate substrate (pre-cleavage complex)
To Be Published
6BDB
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BU of 6bdb by Molmil
I-OnuI K227Y, D236A bound to A3G substrate (pre-cleavage complex)
Descriptor: DNA (26-MER), Ribosomal protein 3/homing endonuclease-like protein fusion
Authors:Brown, C, Zhang, K, McMurrough, T.A, Laforet, M, Gloor, G.B, Edgell, D.R, Junop, M.
Deposit date:2017-10-22
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:I-OnuI K227Y, D236A bound to A3G substrate (pre-cleavage complex)
To Be Published
6BCT
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BU of 6bct by Molmil
I-LtrI E184D bound to non-cognate C4 substrate (pre-cleavage complex)
Descriptor: CALCIUM ION, DNA (26-MER), DNA (27-MER), ...
Authors:Brown, C, Zhang, K, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
Deposit date:2017-10-20
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases.
Nucleic Acids Res., 46, 2018
6BCE
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BU of 6bce by Molmil
Wild-type I-LtrI bound to cognate substrate (pre-cleavage complex)
Descriptor: CALCIUM ION, DNA (27-MER), Ribosomal protein 3/homing endonuclease-like fusion protein
Authors:Brown, C, Zhang, K, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
Deposit date:2017-10-20
Release date:2018-10-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases.
Nucleic Acids Res., 46, 2018
6BCI
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BU of 6bci by Molmil
Wild-type I-LtrI bound to non-cognate C4 substrate (pre-cleavage complex)
Descriptor: CALCIUM ION, DNA (27-MER), Ribosomal protein 3/homing endonuclease-like fusion protein
Authors:Brown, C, Zhang, K, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
Deposit date:2017-10-20
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases.
Nucleic Acids Res., 46, 2018
8XVB
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BU of 8xvb by Molmil
Cryo-EM structure of ATP-DNA-MuB filaments
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent target DNA activator B, DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), ...
Authors:Zhao, X, Zhang, K, Li, S.
Deposit date:2024-01-14
Release date:2024-08-14
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Elucidating the Architectural dynamics of MuB filaments in bacteriophage Mu DNA transposition
Nat Commun, 15, 2024
3J17
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BU of 3j17 by Molmil
Structure of a transcribing cypovirus by cryo-electron microscopy
Descriptor: Structural protein VP3, Structural protein VP5, VP1
Authors:Yang, C, Ji, G, Liu, H, Zhang, K, Liu, G, Sun, F, Zhu, P, Cheng, L.
Deposit date:2011-12-25
Release date:2012-04-04
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structure of a transcribing cypovirus.
Proc.Natl.Acad.Sci.USA, 109, 2012
3K6J
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BU of 3k6j by Molmil
Crystal structure of the dehydrogenase part of multifuctional enzyme 1 from C.elegans
Descriptor: PHOSPHATE ION, Protein F01G10.3, confirmed by transcript evidence, ...
Authors:Ouyang, Z, Zhang, K, Zhai, Y, Lu, J, Sun, F.
Deposit date:2009-10-09
Release date:2010-10-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the dehydrogenase part of multifuctional enzyme 1 from C.elegans
To be Published
3G6L
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BU of 3g6l by Molmil
The crystal structure of a chitinase CrChi1 from the nematophagous fungus Clonostachys rosea
Descriptor: Chitinase
Authors:Gan, Z, Lou, Z, Rao, Z, Zhang, K.-Q.
Deposit date:2009-02-06
Release date:2010-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure and mutagenesis analysis of chitinase CrChi1 from the nematophagous fungus Clonostachys rosea in complex with the inhibitor caffeine
Microbiology, 156, 2010
3G6M
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BU of 3g6m by Molmil
crystal structure of a chitinase CrChi1 from the nematophagous fungus Clonostachys rosea in complex with a potent inhibitor caffeine
Descriptor: CAFFEINE, Chitinase
Authors:Gan, Z, Yang, J, Lou, Z, Rao, Z, Zhang, K.-Q.
Deposit date:2009-02-06
Release date:2010-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure and mutagenesis analysis of chitinase CrChi1 from the nematophagous fungus Clonostachys rosea in complex with the inhibitor caffeine
Microbiology, 156, 2010
4MBQ
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BU of 4mbq by Molmil
TPR3 of FimV from P. aeruginosa (PAO1)
Descriptor: Motility protein FimV
Authors:Nguyen, Y, Zhang, K, Daniel-Ivad, M, Robinson, H, Wolfram, F, Sugiman-Marangos, S.N, Junop, M.S, Burrows, L.L, Howell, P.L.
Deposit date:2013-08-19
Release date:2014-08-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.006 Å)
Cite:Crystal structure of TPR2 from FimV
To be Published
4NPH
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BU of 4nph by Molmil
Crystal structure of SsaN from Salmonella enterica
Descriptor: Probable secretion system apparatus ATP synthase SsaN
Authors:Sugiman-Marangos, S.N, Zhang, K, Cooper, C.A, Coombes, B.K, Junop, M.S.
Deposit date:2013-11-21
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure of SsaN from Salmonella enterica
J.Biol.Chem., 2014
4EGT
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BU of 4egt by Molmil
Crystal structure of major capsid protein P domain from rabbit hemorrhagic disease virus
Descriptor: Major capsid protein VP60
Authors:Wang, X, Xu, F, Zhang, K, Zhai, Y, Sun, F.
Deposit date:2012-04-01
Release date:2013-01-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Atomic model of rabbit hemorrhagic disease virus by cryo-electron microscopy and crystallography.
Plos Pathog., 9, 2013
8ZJL
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BU of 8zjl by Molmil
Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 4)
Descriptor: Dedicator of cytokinesis protein 5, Engulfment and cell motility protein 1, Ras-related C3 botulinum toxin substrate 1
Authors:Kukimoto-Niino, M, Katsura, K, Ishizuka-Katsura, Y, Mishima-Tsumagari, C, Yonemochi, M, Inoue, M, Nakagawa, R, Kaushik, R, Zhang, K.Y.J, Shirouzu, M.
Deposit date:2024-05-15
Release date:2024-06-26
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.31 Å)
Cite:RhoG facilitates a conformational transition in the guanine nucleotide exchange factor complex DOCK5/ELMO1 to an open state.
J.Biol.Chem., 300, 2024

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