Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 779 results

5ZIO
DownloadVisualize
BU of 5zio by Molmil
Crystal structure of NDM-1 in complex with L-captopril
Descriptor: L-CAPTOPRIL, Metallo-beta-lactamase type 2, ZINC ION
Authors:Zhang, H, Hao, Q.
Deposit date:2018-03-16
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Structure-guided optimization of D-captopril for discovery of potent NDM-1 inhibitors
Bioorg.Med.Chem., 29, 2020
5ZJ2
DownloadVisualize
BU of 5zj2 by Molmil
Crystal structure of NDM-1 in complex with D-captopril
Descriptor: 1-(3-MERCAPTO-2-METHYL-PROPIONYL)-PYRROLIDINE-2-CARBOXYLIC ACID, Metallo-beta-lactamase type 2, ZINC ION
Authors:Zhang, H, Hao, Q.
Deposit date:2018-03-18
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structure-guided optimization of D-captopril for discovery of potent NDM-1 inhibitors
Bioorg.Med.Chem., 29, 2020
5Z4P
DownloadVisualize
BU of 5z4p by Molmil
Crystal structure of tubulin-stathmin-TTL-Compound TCA complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6,7,8-trimethoxy-1-(4-methoxyphenyl)-4,5-dihydro-2~{H}-benzo[e]indazole, CALCIUM ION, ...
Authors:Zhang, H, Luo, C.
Deposit date:2018-01-12
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery and Design of novel Tubulin inhibitors
To Be Published
5ZGP
DownloadVisualize
BU of 5zgp by Molmil
Crystal structure of NDM-1 at pH6.2 (Bis-Tris) in complex with hydrolyzed ampicillin
Descriptor: (2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Zhang, H, Hao, Q.
Deposit date:2018-03-10
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Active-Site Conformational Fluctuations Promote the Enzymatic Activity of NDM-1.
Antimicrob. Agents Chemother., 62, 2018
7W0T
DownloadVisualize
BU of 7w0t by Molmil
TRIM7 in complex with C-terminal peptide of 2C
Descriptor: E3 ubiquitin-protein ligase TRIM7, peptide
Authors:Zhang, H, Liang, X, Li, X.Z.
Deposit date:2021-11-18
Release date:2022-08-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:A C-terminal glutamine recognition mechanism revealed by E3 ligase TRIM7 structures.
Nat.Chem.Biol., 18, 2022
7W0S
DownloadVisualize
BU of 7w0s by Molmil
TRIM7 in complex with C-terminal peptide of 2C
Descriptor: DI(HYDROXYETHYL)ETHER, E3 ubiquitin-protein ligase TRIM7, GLYCEROL, ...
Authors:Zhang, H, Liang, X, Li, X.Z.
Deposit date:2021-11-18
Release date:2022-08-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A C-terminal glutamine recognition mechanism revealed by E3 ligase TRIM7 structures.
Nat.Chem.Biol., 18, 2022
7W72
DownloadVisualize
BU of 7w72 by Molmil
Structure of a human glycosylphosphatidylinositol (GPI) transamidase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GPI transamidase component PIG-S, ...
Authors:Zhang, H, Su, J, Li, B, Gao, Y, Zhang, X.C, Zhao, Y.
Deposit date:2021-12-02
Release date:2022-02-16
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of human glycosylphosphatidylinositol transamidase.
Nat.Struct.Mol.Biol., 29, 2022
7X1N
DownloadVisualize
BU of 7x1n by Molmil
Crystal structure of MEF2D-MRE complex
Descriptor: DNA (5'-D(P*AP*AP*CP*TP*AP*TP*TP*TP*AP*TP*AP*AP*G)-3'), DNA (5'-D(P*TP*CP*TP*TP*AP*TP*AP*AP*AP*TP*AP*GP*T)-3'), Myocyte enhancer factor 2D/deleted in azoospermia associated protein 1 fusion protein
Authors:Zhang, H, Zhang, M, Wang, Q.Q, Chen, Z, Chen, S.J, Meng, G.
Deposit date:2022-02-24
Release date:2022-05-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.315 Å)
Cite:Functional, structural, and molecular characterizations of the leukemogenic driver MEF2D-HNRNPUL1 fusion.
Blood, 140, 2022
5ZGZ
DownloadVisualize
BU of 5zgz by Molmil
Crystal structure of NDM-1 at pH7.5 (Imidazole) with 1 molecule per asymmetric unit
Descriptor: 1,2-ETHANEDIOL, HYDROXIDE ION, Metallo-beta-lactamase type 2, ...
Authors:Zhang, H, Hao, Q.
Deposit date:2018-03-10
Release date:2018-08-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Active-Site Conformational Fluctuations Promote the Enzymatic Activity of NDM-1.
Antimicrob. Agents Chemother., 62, 2018
5ZGF
DownloadVisualize
BU of 5zgf by Molmil
Crystal structure of NDM-1 Q123G mutant
Descriptor: HYDROXIDE ION, Metallo-beta-lactamase type 2, ZINC ION
Authors:Zhang, H, Hao, Q.
Deposit date:2018-03-08
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Active-Site Conformational Fluctuations Promote the Enzymatic Activity of NDM-1.
Antimicrob. Agents Chemother., 62, 2018
8GMY
DownloadVisualize
BU of 8gmy by Molmil
Structure of methyltransferase
Descriptor: methyltransferase
Authors:Zhang, H, Li, X.Z, Wen, Y.N.
Deposit date:2022-08-22
Release date:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of methyltransferase
To Be Published
8GMZ
DownloadVisualize
BU of 8gmz by Molmil
Structure of methyltransferase
Descriptor: methyltransferase
Authors:Zhang, H, Li, X.Z, Wen, Y.N.
Deposit date:2022-08-22
Release date:2023-08-30
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structure of methyltransferase
To Be Published
8HS8
DownloadVisualize
BU of 8hs8 by Molmil
a bacteria protein complex
Descriptor: CRISPR-associated endonuclease Cas9, a protein
Authors:Zhang, H, Li, X.Z, Song, G.Y.
Deposit date:2022-12-17
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:a bacteria protein
To Be Published
7EJ3
DownloadVisualize
BU of 7ej3 by Molmil
UTP cyclohydrolase
Descriptor: DIPHOSPHATE, GLYCINE, GTP cyclohydrolase II, ...
Authors:Zhang, H, Zhang, Y, Yuchi, Z.
Deposit date:2021-04-01
Release date:2022-09-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and biochemical investigation of UTP cyclohydrolase
Acs Catalysis, 2021
7X32
DownloadVisualize
BU of 7x32 by Molmil
Crystal structure of E. coli NfsB in complex with berberine
Descriptor: BERBERINE, DIMETHYL SULFOXIDE, Dihydropteridine reductase, ...
Authors:Zhang, H, Wen, H.Y.
Deposit date:2022-02-27
Release date:2022-10-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.829 Å)
Cite:Structural basis for the transformation of the traditional medicine berberine by bacterial nitroreductase.
Acta Crystallogr D Struct Biol, 78, 2022
6J2L
DownloadVisualize
BU of 6j2l by Molmil
Crystal structure of Bi-functional enzyme
Descriptor: Histidine biosynthesis bifunctional protein HisIE, MAGNESIUM ION, ZINC ION
Authors:Zhang, H, Shang, G, Wang, Y.
Deposit date:2019-01-01
Release date:2020-01-01
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structural analysis of Shigella flexneri bi-functional enzyme HisIE in histidine biosynthesis.
Biochem.Biophys.Res.Commun., 516, 2019
7DW5
DownloadVisualize
BU of 7dw5 by Molmil
Crystal structure of DUX4 HD1-HD2 domain complexed with ERG sites
Descriptor: BROMIDE ION, DNA (5'-D(P*CP*GP*AP*CP*TP*TP*GP*AP*TP*GP*AP*GP*AP*TP*TP*AP*GP*AP*CP*TP*G)-3'), Double homeobox protein 4-like protein 2
Authors:Zhang, H, Cheng, N, Li, Z, Zhang, W, Dong, X, Huang, J, Meng, G.
Deposit date:2021-01-15
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:DNA crosslinking and recombination-activating genes 1/2 (RAG1/2) are required for oncogenic splicing in acute lymphoblastic leukemia.
Cancer Commun (Lond), 41, 2021
6LJ8
DownloadVisualize
BU of 6lj8 by Molmil
Crystal structure of NDM-1 in complex with D-captopril derivative wss04134
Descriptor: 1,2-ETHANEDIOL, 2-[1-[(2S)-2-methyl-3-sulfanyl-propanoyl]piperidin-4-yl]ethanoic acid, Metallo-beta-lactamase type 2, ...
Authors:Zhang, H, Ma, G.
Deposit date:2019-12-13
Release date:2020-12-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-guided optimization of D-captopril for discovery of potent NDM-1 inhibitors.
Bioorg.Med.Chem., 29, 2020
7Y1B
DownloadVisualize
BU of 7y1b by Molmil
3.2 angstrom cryo-EM structure of extracellular region of mouse Basigin-2 in complex with the Fab fragment of antibody 6E7F1
Descriptor: Heavy chain of 6E7F1, Isoform 2 of Basigin, Light chain of 6E7F1
Authors:Zhang, H, Yang, X, Xue, Y, Huang, Y, Mo, X, Zhang, H, Li, N, Gao, N, Li, X, Wang, S, Gao, Y, Liao, J.
Deposit date:2022-06-08
Release date:2023-06-14
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Allosteric modulation of monocarboxylate transporters 1 and 4 by targeting their chaperon Basigin
To Be Published
3NSN
DownloadVisualize
BU of 3nsn by Molmil
Crystal Structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 complexed with TMG-chitotriomycin
Descriptor: 2-deoxy-2-(trimethylammonio)-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetylglucosaminidase
Authors:Zhang, H, Liu, T, Liu, F, Yang, Q, Shen, X.
Deposit date:2010-07-02
Release date:2010-11-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Determinants of an Insect {beta}-N-Acetyl-D-hexosaminidase Specialized as a Chitinolytic Enzyme
J.Biol.Chem., 286, 2011
3NSM
DownloadVisualize
BU of 3nsm by Molmil
Crystal Structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 from Ostrinia furnacalis
Descriptor: N-acetylglucosaminidase
Authors:Zhang, H, Liu, T, Liu, F, Yang, Q, Shen, X.
Deposit date:2010-07-02
Release date:2010-11-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Determinants of an Insect {beta}-N-Acetyl-D-hexosaminidase Specialized as a Chitinolytic Enzyme
J.Biol.Chem., 286, 2011
5XOO
DownloadVisualize
BU of 5xoo by Molmil
The structure of hydra Fam20 with sugar
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE, Glycosaminoglycan xylosylkinase, ...
Authors:Zhang, H, Xiao, J.
Deposit date:2017-05-29
Release date:2018-04-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure and evolution of the Fam20 kinases
Nat Commun, 9, 2018
3OZO
DownloadVisualize
BU of 3ozo by Molmil
Crystal Structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 complexed with NGT
Descriptor: 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL, N-acetylglucosaminidase
Authors:Zhang, H, Liu, T, Liu, F, Shen, X, Yang, Q.
Deposit date:2010-09-27
Release date:2011-09-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 complexed with NGT
To be Published
3OZP
DownloadVisualize
BU of 3ozp by Molmil
Crystal Structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 complexed with PUGNAc
Descriptor: N-acetylglucosaminidase, O-(2-ACETAMIDO-2-DEOXY D-GLUCOPYRANOSYLIDENE) AMINO-N-PHENYLCARBAMATE
Authors:Zhang, H, Liu, T, Liu, F, Shen, X, Yang, Q.
Deposit date:2010-09-27
Release date:2011-08-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Active-pocket size differentiating insectile from bacterial chitinolytic beta-N-acetyl-D-hexosaminidases
Biochem.J., 438, 2011
5YH0
DownloadVisualize
BU of 5yh0 by Molmil
The structure of DrFam20C1
Descriptor: DrFam20C1
Authors:Zhang, H, Xiao, J.
Deposit date:2017-09-27
Release date:2018-04-11
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Structure and evolution of the Fam20 kinases
Nat Commun, 9, 2018

220472

数据于2024-05-29公开中

PDB statisticsPDBj update infoContact PDBjnumon