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PDB: 1142 件

7V27
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RBD/XG005 local refinement
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, XG005-VH, ...
著者Zhan, W.Q, Zhang, X, Sun, L, Chen, Z.G.
登録日2021-08-07
公開日2022-08-10
実験手法ELECTRON MICROSCOPY (4.18 Å)
主引用文献RBD/XG005 local refinement
To Be Published
7WB4
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Cryo-EM structure of the NR subunit from X. laevis NPC
分子名称: GATOR complex protein SEC13, MGC154553 protein, MGC83295 protein, ...
著者Huang, G, Zhan, X, Shi, Y.
登録日2021-12-15
公開日2022-03-02
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (5.6 Å)
主引用文献Cryo-EM structure of the nuclear ring from Xenopus laevis nuclear pore complex.
Cell Res., 32, 2022
7WKK
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Cryo-EM structure of the IR subunit from X. laevis NPC
分子名称: Aaas-prov protein, IL4I1 protein, MGC83295 protein, ...
著者Huang, G, Zhan, X, Shi, Y.
登録日2022-01-10
公開日2022-03-30
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM structure of the inner ring from the Xenopus laevis nuclear pore complex.
Cell Res., 32, 2022
2XRO
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Crystal structure of TtgV in complex with its DNA operator
分子名称: HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGV, OSMIUM ION, TTGV OPERATOR DNA
著者Lu, D, Fillet, S, Meng, C, Alguel, Y, Kloppsteck, P, Bergeron, J, Krell, T, Gallegos, M.-T, Ramos, J, Zhang, X.
登録日2010-09-17
公開日2010-12-01
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal Structure of Ttgv in Complex with its DNA Operator Reveals a General Model for Cooperative DNA Binding of Tetrameric Gene Regulators.
Genes Dev., 24, 2010
3UT7
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Structural view of a non Pfam singleton and crystal packing analysis
分子名称: Putative uncharacterized protein, SULFATE ION
著者Cheng, C, Shaw, N, Zhang, X, Zhang, M, Ding, W, Wang, B.C, Liu, Z.J.
登録日2011-11-25
公開日2012-03-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Structural view of a non pfam singleton and crystal packing analysis.
Plos One, 7, 2012
3UT8
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Structural view of a non Pfam singleton and crystal packing analysis
分子名称: IODIDE ION, Putative uncharacterized protein
著者Cheng, C, Shaw, N, Zhang, X, Zhang, M, Ding, W, Wang, B.C, Liu, Z.J.
登録日2011-11-25
公開日2012-03-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.168 Å)
主引用文献Structural view of a non pfam singleton and crystal packing analysis.
Plos One, 7, 2012
4V41
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E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC)
分子名称: BETA-GALACTOSIDASE, MAGNESIUM ION
著者Juers, D.H, Jacobson, R.H, Wigley, D, Zhang, X.J, Huber, R.E, Tronrud, D.E, Matthews, B.W.
登録日2000-06-07
公開日2014-07-09
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献High resolution refinement of beta-galactosidase in a new crystal form reveals multiple metal-binding sites and provides a structural basis for alpha-complementation.
Protein Sci., 9, 2000
4FNC
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BU of 4fnc by Molmil
Human TDG in a post-reactive complex with 5-hydroxymethyluracil (5hmU)
分子名称: 5-HYDROXYMETHYL URACIL, DNA (28-MER), DNA (29-MER), ...
著者Hashimoto, H, Hong, S, Bhagwat, A.S, Zhang, X, Cheng, X.
登録日2012-06-19
公開日2012-09-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.493 Å)
主引用文献Excision of 5-hydroxymethyluracil and 5-carboxylcytosine by the thymine DNA glycosylase domain: its structural basis and implications for active DNA demethylation.
Nucleic Acids Res., 40, 2012
4F5X
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Location of the dsRNA-dependent polymerase, VP1, in rotavirus particles
分子名称: Intermediate capsid protein VP6, RNA-directed RNA polymerase, VP2 protein, ...
著者Estrozi, L.F, Settembre, E.C, Goret, G, McClain, B, Zhang, X, Chen, J.Z, Grigorieff, N, Harrison, S.C.
登録日2012-05-13
公開日2012-10-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (5 Å)
主引用文献Location of the dsRNA-Dependent Polymerase, VP1, in Rotavirus Particles.
J.Mol.Biol., 425, 2013
1MHQ
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Crystal Structure Of Human GGA2 VHS Domain
分子名称: ADP-ribosylation factor binding protein GGA2
著者Zhu, G, Zhang, X.C.
登録日2002-08-20
公開日2003-03-11
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of GGA2 VHS domain and its implication in plasticity in the ligand binding pocket
FEBS LETT., 537, 2003
6Z3A
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Mec1-Ddc2 (wild-type) in complex with AMP-PNP
分子名称: DNA damage checkpoint protein LCD1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Serine/threonine-protein kinase MEC1, ...
著者Yates, L.A, Zhang, X.
登録日2020-05-19
公開日2020-11-11
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Mechanism of auto-inhibition and activation of Mec1 ATR checkpoint kinase.
Nat.Struct.Mol.Biol., 28, 2021
6Z2W
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Mec1-Ddc2 (F2244L mutant) in complex with Mg AMP-PNP
分子名称: DNA damage checkpoint protein LCD1, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Yates, L.A, Zhang, X.
登録日2020-05-18
公開日2020-11-11
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献Mechanism of auto-inhibition and activation of Mec1 ATR checkpoint kinase.
Nat.Struct.Mol.Biol., 28, 2021
6Z2X
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Mec1-Ddc2 (F2244L mutant) in complex with Mg AMP-PNP (State II)
分子名称: DNA damage checkpoint protein LCD1, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Yates, L.A, Zhang, X.
登録日2020-05-18
公開日2020-11-11
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Mechanism of auto-inhibition and activation of Mec1 ATR checkpoint kinase.
Nat.Struct.Mol.Biol., 28, 2021
8DOL
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Mechanism of regulation of the Helicobacter pylori Cagbeta ATPase by CagZ
分子名称: Cag pathogenicity island protein (Cag5), DI(HYDROXYETHYL)ETHER, SULFATE ION
著者Wu, X, Zhao, Y, Yang, W, Sun, L, Ye, X, Jiang, M, Wang, Q, Wang, Q, Zhang, X, Wu, Y.
登録日2022-07-13
公開日2023-02-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Mechanism of regulation of the Helicobacter pylori Cag beta ATPase by CagZ.
Nat Commun, 14, 2023
2GIC
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BU of 2gic by Molmil
Crystal Structure of a vesicular stomatitis virus nucleocapsid-RNA complex
分子名称: 45-MER, Nucleocapsid protein, URANYL (VI) ION
著者Green, T.J, Zhang, X, Wertz, G.W, Luo, M.
登録日2006-03-28
公開日2006-08-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Structure of the vesicular stomatitis virus nucleoprotein-RNA complex unveils how the RNA is sequestered
Science, 313, 2006
5E6P
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BU of 5e6p by Molmil
PlexinB2 cytoplasmic region/PDZ-RhoGEF PDZ domain complex
分子名称: Plexin-B2, Rho guanine nucleotide exchange factor 11
著者Pascoe, H.G, Zhang, X.
登録日2015-10-10
公開日2015-11-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.215 Å)
主引用文献Secondary PDZ domain-binding site on class B plexins enhances the affinity for PDZ-RhoGEF.
Proc.Natl.Acad.Sci.USA, 112, 2015
7LLL
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Exendin-4-bound Glucagon-Like Peptide-1 (GLP-1) Receptor in complex with Gs protein
分子名称: Exendin-4, Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Wootten, D, Sexton, P.M, Belousoff, M.J, Danev, R, Zhang, X, Khoshouei, M, Venugopal, H.
登録日2021-02-04
公開日2022-01-12
最終更新日2022-01-26
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Dynamics of GLP-1R peptide agonist engagement are correlated with kinetics of G protein activation.
Nat Commun, 13, 2022
7LLY
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Oxyntomodulin-bound Glucagon-Like Peptide-1 (GLP-1) Receptor in complex with Gs protein
分子名称: Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Wootten, D, Sexton, P.M, Belousoff, M.J, Danev, R, Zhang, X, Khoshouei, M, Venugopal, H.
登録日2021-02-04
公開日2022-01-12
最終更新日2022-01-26
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Dynamics of GLP-1R peptide agonist engagement are correlated with kinetics of G protein activation.
Nat Commun, 13, 2022
7XRG
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ferritin nanocage assembly with nickel ion
分子名称: FE (III) ION, Ferritin, NICKEL (II) ION
著者Zhao, G.H, Zhang, X.R.
登録日2022-05-10
公開日2023-05-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献ferritin nanocage assembly with nickel ion
To Be Published
6LJS
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BU of 6ljs by Molmil
Crystal structure of human FABP4 in complex with a novel inhibitor
分子名称: 1,2-ETHANEDIOL, 2-[(2-phenylphenyl)amino]benzoic acid, Fatty acid-binding protein, ...
著者Su, H.X, Zhang, X.L, Li, M.J, Xu, Y.C.
登録日2019-12-17
公開日2020-04-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Exploration of Fragment Binding Poses Leading to Efficient Discovery of Highly Potent and Orally Effective Inhibitors of FABP4 for Anti-inflammation.
J.Med.Chem., 63, 2020
7XU2
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Structure of SARS-CoV-2 Spike Protein with Engineered x3 Disulfide (x3(D427C, V987C) and single Arg S1/S2 cleavage site), Locked-2 Conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
著者Qu, K, Chen, Q, Ciazynska, K.A, Liu, B, Zhang, X, Wang, J, He, Y, Guan, J, He, J, Liu, T, Zhang, X, Carter, A.P, Xiong, X, Briggs, J.A.G.
登録日2022-05-18
公開日2022-07-20
最終更新日2022-08-17
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Engineered disulfide reveals structural dynamics of locked SARS-CoV-2 spike.
Plos Pathog., 18, 2022
6K5H
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Structural and catalytic analysis of two diverse uridine phosphorylases in the oomycete Phytophthora capsici.
分子名称: 1-O-phosphono-alpha-D-ribofuranose, URACIL, Uridine phosphorylase
著者Yang, C.C, Zhang, X.G.
登録日2019-05-28
公開日2019-06-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.503 Å)
主引用文献Structural and catalytic analysis of two diverse uridine phosphorylases in Phytophthora capsici.
Sci Rep, 10, 2020
7XU0
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Structure of SARS-CoV-2 Spike Protein with Engineered x3 Disulfide (x3(D427C, V987C) and single Arg S1/S2 cleavage site), Locked-211 Conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
著者Qu, K, Chen, Q, Ciazynska, K.A, Liu, B, Zhang, X, Wang, J, He, Y, Guan, J, He, J, Liu, T, Zhang, X, Carter, A.P, Xiong, X, Briggs, J.A.G.
登録日2022-05-18
公開日2022-07-20
最終更新日2022-08-17
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Engineered disulfide reveals structural dynamics of locked SARS-CoV-2 spike.
Plos Pathog., 18, 2022
7XTZ
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Structure of SARS-CoV-2 Spike Protein with Engineered x3 Disulfide (x3(D427C, V987C) and single Arg S1/S2 cleavage site), Locked-1 Conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
著者Qu, K, Chen, Q, Ciazynska, K.A, Liu, B, Zhang, X, Wang, J, He, Y, Guan, J, He, J, Liu, T, Zhang, X, Carter, A.P, Xiong, X, Briggs, J.A.G.
登録日2022-05-18
公開日2022-07-20
最終更新日2022-08-17
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Engineered disulfide reveals structural dynamics of locked SARS-CoV-2 spike.
Plos Pathog., 18, 2022
7XU1
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Structure of SARS-CoV-2 Spike Protein with Engineered x3 Disulfide (x3(D427C, V987C) and single Arg S1/S2 cleavage site), Locked-122 Conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
著者Qu, K, Chen, Q, Ciazynska, K.A, Liu, B, Zhang, X, Wang, J, He, Y, Guan, J, He, J, Liu, T, Zhang, X, Carter, A.P, Xiong, X, Briggs, J.A.G.
登録日2022-05-18
公開日2022-07-20
最終更新日2022-08-17
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Engineered disulfide reveals structural dynamics of locked SARS-CoV-2 spike.
Plos Pathog., 18, 2022

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件を2024-07-10に公開中

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